RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 PHLDA3Q9Y5J5 127 aa9.96□□□□□ -0.81
SYNGAP1-201ENST00000293748 IFNL4K9M1U5 179 aa9.96□□□□□ -0.81
SYNGAP1-201ENST00000293748 PLA2G2AP14555 144 aa9.96□□□□□ -0.81
SYNGAP1-201ENST00000293748 IGFBP3P17936 291 aaPredicted RBP9.96□□□□□ -0.81
SYNGAP1-201ENST00000293748 C19orf54Q5BKX5 351 aa9.96□□□□□ -0.81
SYNGAP1-201ENST00000293748 GOLT1AQ6ZVE7 132 aa9.96□□□□□ -0.81
SYNGAP1-201ENST00000293748 IMMP2LQ96T52 175 aa9.96□□□□□ -0.81
SYNGAP1-201ENST00000293748 A0A1B0GW15 77 aa9.96□□□□□ -0.82
SYNGAP1-201ENST00000293748 SLC17A3O00476 420 aa9.96□□□□□ -0.82
SYNGAP1-201ENST00000293748 ZIC3O60481 467 aa9.96□□□□□ -0.82
SYNGAP1-201ENST00000293748 ICAM4Q14773 271 aa9.96□□□□□ -0.82
SYNGAP1-201ENST00000293748 C1QL2Q7Z5L3 287 aa9.96□□□□□ -0.82
SYNGAP1-201ENST00000293748 ZNF525Q8N782 197 aa9.96□□□□□ -0.82
SYNGAP1-201ENST00000293748 COX6B1P14854 86 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 HIST1H1AQ02539 215 aaPredicted RBP9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 TMEM54Q969K7 222 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 VCX2Q9H322 139 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 SS18L1O75177 396 aaPredicted RBP9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 ATP5LO75964 103 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 CTSSP25774 331 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 RELQ04864 619 aaPredicted RBP9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 HEPN1Q6WQI6 88 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 DNM1P46Q6ZS02 220 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 NRN1Q9NPD7 142 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 SPCS1Q9Y6A9 102 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 CACNA1DQ01668 2161 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 A0A1B0GWB2 263 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 SERF1AO75920 110 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 Q6AWC8 147 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 PCSK4Q6UW60 755 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 TMEM186Q96B77 213 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 COL6A6A6NMZ7 2263 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 A0A1B0GUT8 65 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 CELA3AP09093 270 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 LOXL3P58215 753 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 RTN4RQ9BZR6 473 aa9.95□□□□□ -0.82
SYNGAP1-201ENST00000293748 IGHV3-72A0A0B4J1Y9 119 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 GFRA1P56159 465 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 MEF2CQ06413 473 aaPredicted RBP9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 EBLN2Q6P2I7 272 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 TCF23Q7RTU1 214 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 C5orf30Q96GV9 206 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 TRBV24-1A0A075B6N3 115 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 H0YIZ8 118 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 NBEAP1P0C6P0 100 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 LINC00114Q6XXX2 140 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 OR5P3Q8WZ94 311 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 KIR2DL4Q99706 377 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 FER1L5A0AVI2 2057 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 hCG_38984A0A1B0GV85 526 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 COLCA2A8K830 154 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 OR9G1Q8NH87 305 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 PRELID3AQ96N28 172 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 TMEM242Q9NWH2 141 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 TRBV20OR9-2A0A075B6H5 130 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 TRAV8-6A0A0B4J262 113 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 SCO2A0A1W2PP80 73 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 IZUMO1RA6ND01 250 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 PEX7O00628 323 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 CGAP01215 116 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 CD5P06127 495 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 ACSF3Q4G176 576 aaPredicted RBP9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 TM4SF20Q53R12 229 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 SLC25A53Q5H9E4 307 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 C1QL4Q86Z23 238 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 SGK494Q96LW2 274 aa9.94□□□□□ -0.82
SYNGAP1-201ENST00000293748 MED13Q9UHV7 2174 aa9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 EPG5Q9HCE0 2579 aa9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 PKD1L2Q7Z442 2459 aa9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 ATP5G3P48201 142 aa9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 RNFT1Q5M7Z0 435 aa9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 ARL6IP6Q8N6S5 226 aa9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 FAM169BQ8N8A8 192 aa9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 KLF14Q8TD94 323 aaPredicted RBP9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 HIST1H2BLQ99880 126 aa9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 IFI27L2Q9H2X8 130 aa9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 APOHP02749 345 aaPredicted RBP9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 DLX6P56179 175 aa9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 SRSF3P84103 164 aaKnown RBP9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 WFDC3Q8IUB2 231 aa9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 LINC00470Q9BZP3 86 aa9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 GP6Q9HCN6 339 aa9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 MRPL16Q9NX20 251 aaKnown RBP9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 TDGF1P3P51864 188 aa9.93□□□□□ -0.82
SYNGAP1-201ENST00000293748 WNT9BO14905 357 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 FAM106CPP0CH98 169 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 PRSS8Q16651 343 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 LINC00305Q7Z4B0 112 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 OSR1Q8TAX0 266 aaPredicted RBP9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 MRPS16Q9Y3D3 137 aaKnown RBP9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 TRAV9-2A0A087WT02 112 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 PPP1R17O96001 155 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 TIMP3P35625 211 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 TFF3Q07654 80 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 GPR82Q96P67 336 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 RPP21Q9H633 154 aaKnown RBP9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 TMEM160Q9NX00 188 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 SPRR3Q9UBC9 169 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 C12orf77C9JDV5 145 aa9.92□□□□□ -0.82
SYNGAP1-201ENST00000293748 CCL20P78556 96 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms