RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 LINC00869P0C866 280 aa6.32□□□□□ -1.4
EPHA4-201ENST00000281821 UQCC3Q6UW78 93 aa6.32□□□□□ -1.4
EPHA4-201ENST00000281821 PSMG3-AS1Q96PY0 264 aa6.32□□□□□ -1.4
EPHA4-201ENST00000281821 SIRPDQ9H106 197 aa6.32□□□□□ -1.4
EPHA4-201ENST00000281821 COL8A1P27658 744 aa6.32□□□□□ -1.4
EPHA4-201ENST00000281821 PXMP4Q9Y6I8 212 aa6.32□□□□□ -1.4
EPHA4-201ENST00000281821 RNASEK-C17orf49H0YIS7 233 aa6.32□□□□□ -1.4
EPHA4-201ENST00000281821 HAX1O00165 279 aa6.32□□□□□ -1.4
EPHA4-201ENST00000281821 BSCL2Q96G97 398 aaPredicted RBP6.32□□□□□ -1.4
EPHA4-201ENST00000281821 RHOGP84095 191 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 HOXA4Q00056 320 aaPredicted RBP6.31□□□□□ -1.4
EPHA4-201ENST00000281821 FAM74A3Q4VXF1 159 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 ZNF383Q8NA42 475 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 OR1B1Q8NGR6 318 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 PARP12Q9H0J9 701 aaKnown RBP6.31□□□□□ -1.4
EPHA4-201ENST00000281821 F11RQ9Y624 299 aaKnown RBP6.31□□□□□ -1.4
EPHA4-201ENST00000281821 WNK2Q9Y3S1 2297 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 DUSP14O95147 198 aaKnown RBP6.31□□□□□ -1.4
EPHA4-201ENST00000281821 C8orf88P0DMB2 117 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 SSTP61278 116 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 PUSL1Q8N0Z8 303 aaKnown RBP6.31□□□□□ -1.4
EPHA4-201ENST00000281821 WNT10AQ9GZT5 417 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 NPIPB5A8MRT5 1133 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 IGLV1-47P01700 117 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 GAMTQ14353 236 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 FAM162BQ5T6X4 162 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 TMEM182Q6ZP80 229 aaPredicted RBP6.31□□□□□ -1.4
EPHA4-201ENST00000281821 TAF15Q92804 592 aaKnown RBP eCLIP6.31□□□□□ -1.4
EPHA4-201ENST00000281821 NDUFB8O95169 186 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 FAM78BQ5VT40 261 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 HCP5Q6MZN7 132 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 LCN15Q6UWW0 184 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 MED9Q9NWA0 146 aa6.31□□□□□ -1.4
EPHA4-201ENST00000281821 ORM2P19652 201 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 IZUMO4Q1ZYL8 232 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 NMSQ5H8A3 153 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 FAM120AOSQ5T036 256 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 BRD3OSQ6XYD6 125 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 PHF3Q92576 2039 aaKnown RBP6.3□□□□□ -1.4
EPHA4-201ENST00000281821 NDUFS7O75251 213 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 OR2J3O76001 311 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 SGMS2Q8NHU3 365 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 NPBQ8NG41 125 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 SERTAD4Q9NUC0 356 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 ZNRD1Q9P1U0 126 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 TP53BP1Q12888 1972 aaPredicted RBP6.3□□□□□ -1.4
EPHA4-201ENST00000281821 HOXB4P17483 251 aaPredicted RBP6.3□□□□□ -1.4
EPHA4-201ENST00000281821 RELBQ01201 579 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 FOXE3Q13461 319 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 MEGF9Q9H1U4 602 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 INS-IGF2F8WCM5 200 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 PDE6DO43924 150 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 CGB3P0DN86 165 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 CGB7P0DN87 165 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 RAB4AP20338 218 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 UBE2G2P60604 165 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 MSMPQ1L6U9 139 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 OR10J6PQ8NGY7 276 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 TMEM208Q9BTX3 173 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 DCAF16Q9NXF7 216 aa6.3□□□□□ -1.4
EPHA4-201ENST00000281821 CENPVL3A0A0U1RRI6 287 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 ADIRFQ15847 76 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 TRGV9Q99603 122 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 RPL29P47914 159 aaKnown RBP6.29□□□□□ -1.4
EPHA4-201ENST00000281821 SNRPEP62304 92 aaKnown RBP6.29□□□□□ -1.4
EPHA4-201ENST00000281821 PNRC1Q12796 327 aaPredicted RBP6.29□□□□□ -1.4
EPHA4-201ENST00000281821 RNF151Q2KHN1 245 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 CYP2G1PQ6ZSU1 146 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 LINC00052Q96N35 136 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 DOPEY2Q9Y3R5 2298 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 NXPH3O95157 252 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 SMAGPQ0VAQ4 97 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 NPIPB3Q92617 1050 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 PAXXQ9BUH6 204 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 MED13LQ71F56 2210 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 IGKV1D-8A0A087WSZ0 117 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 YPEL3P61236 119 aaPredicted RBP6.29□□□□□ -1.4
EPHA4-201ENST00000281821 TBX15Q96SF7 602 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 SDHCQ99643 169 aaPredicted RBP6.29□□□□□ -1.4
EPHA4-201ENST00000281821 PARD6GQ9BYG4 376 aaPredicted RBP6.29□□□□□ -1.4
EPHA4-201ENST00000281821 TEX50A0A1B0GTY4 177 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 OR10J4P0C629 311 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 SRSF4Q08170 494 aaKnown RBP6.29□□□□□ -1.4
EPHA4-201ENST00000281821 KLRD1Q13241 179 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 SAPCD1Q5SSQ6 148 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 ZNF439Q8NDP4 499 aa6.29□□□□□ -1.4
EPHA4-201ENST00000281821 ELF5Q9UKW6 265 aaPredicted RBP6.29□□□□□ -1.4
EPHA4-201ENST00000281821 CLPSL1A2RUU4 121 aa6.28□□□□□ -1.4
EPHA4-201ENST00000281821 AMBPP02760 352 aa6.28□□□□□ -1.4
EPHA4-201ENST00000281821 TUSC1Q2TAM9 212 aa6.28□□□□□ -1.4
EPHA4-201ENST00000281821 TMEM78Q5T7P6 136 aa6.28□□□□□ -1.4
EPHA4-201ENST00000281821 BAGE3Q86Y29 109 aa6.28□□□□□ -1.4
EPHA4-201ENST00000281821 BAGE2Q86Y30 109 aa6.28□□□□□ -1.4
EPHA4-201ENST00000281821 IGFBPL1Q8WX77 278 aa6.28□□□□□ -1.4
EPHA4-201ENST00000281821 WDR83OSQ9Y284 106 aa6.28□□□□□ -1.4
EPHA4-201ENST00000281821 VWC2LB2RUY7 222 aa6.28□□□□□ -1.4
EPHA4-201ENST00000281821 IGHV4-31P0DP07 118 aa6.28□□□□□ -1.4
EPHA4-201ENST00000281821 RPS20P60866 119 aaKnown RBP6.28□□□□□ -1.4
EPHA4-201ENST00000281821 LHFPL5Q8TAF8 219 aa6.28□□□□□ -1.4
EPHA4-201ENST00000281821 LINC00862A6NCI5 91 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms