RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 MIC13Q5XKP0 118 aa10.54□□□□□ -0.72
ACER3-201ENST00000278544 ARPC1AQ92747 370 aa10.54□□□□□ -0.72
ACER3-201ENST00000278544 TAAR5O14804 337 aa10.54□□□□□ -0.72
ACER3-201ENST00000278544 CAMLGP49069 296 aa10.54□□□□□ -0.72
ACER3-201ENST00000278544 LCN15Q6UWW0 184 aa10.54□□□□□ -0.72
ACER3-201ENST00000278544 Q6ZRG5 221 aa10.54□□□□□ -0.72
ACER3-201ENST00000278544 NPIPB3Q92617 1050 aa10.54□□□□□ -0.72
ACER3-201ENST00000278544 ZNF48Q96MX3 618 aaPredicted RBP10.54□□□□□ -0.72
ACER3-201ENST00000278544 IGHV7-81A0A0B4J1V7 117 aa10.53□□□□□ -0.72
ACER3-201ENST00000278544 RPS10-NUDT3A0A1W2PQS6 291 aa10.53□□□□□ -0.72
ACER3-201ENST00000278544 TEX22C9J3V5 150 aa10.53□□□□□ -0.72
ACER3-201ENST00000278544 HOXA3O43365 443 aaPredicted RBP10.53□□□□□ -0.72
ACER3-201ENST00000278544 UNQ5815/PRO19632Q6UWF5 114 aa10.53□□□□□ -0.72
ACER3-201ENST00000278544 OR52E5Q8NH55 327 aa10.53□□□□□ -0.72
ACER3-201ENST00000278544 ATRQ13535 2644 aa10.53□□□□□ -0.72
ACER3-201ENST00000278544 NSD1Q96L73 2696 aaPredicted RBP10.53□□□□□ -0.72
ACER3-201ENST00000278544 C2CD3Q4AC94 2353 aa10.53□□□□□ -0.72
ACER3-201ENST00000278544 OR2J3O76001 311 aa10.53□□□□□ -0.72
ACER3-201ENST00000278544 LRRC75BQ2VPJ9 315 aa10.53□□□□□ -0.72
ACER3-201ENST00000278544 ZNF257Q9Y2Q1 563 aa10.53□□□□□ -0.72
ACER3-201ENST00000278544 SELENOKQ9Y6D0 94 aa10.53□□□□□ -0.72
ACER3-201ENST00000278544 FAM90A9PA6NNJ1 464 aa10.53□□□□□ -0.72
ACER3-201ENST00000278544 RND2P52198 227 aa10.53□□□□□ -0.72
ACER3-201ENST00000278544 NARS2Q96I59 477 aaKnown RBP10.53□□□□□ -0.72
ACER3-201ENST00000278544 DMRT1Q9Y5R6 373 aa10.53□□□□□ -0.72
ACER3-201ENST00000278544 RAB2AP61019 212 aa10.52□□□□□ -0.73
ACER3-201ENST00000278544 TREML4Q6UXN2 200 aa10.52□□□□□ -0.73
ACER3-201ENST00000278544 OR5B12Q96R08 314 aa10.52□□□□□ -0.73
ACER3-201ENST00000278544 WDR61Q9GZS3 305 aaKnown RBP10.52□□□□□ -0.73
ACER3-201ENST00000278544 SLC25A22Q9H936 323 aa10.52□□□□□ -0.73
ACER3-201ENST00000278544 A0A1W2PN81 502 aa10.52□□□□□ -0.73
ACER3-201ENST00000278544 DFFBO76075 338 aa10.52□□□□□ -0.73
ACER3-201ENST00000278544 CHRNA7P36544 502 aa10.52□□□□□ -0.73
ACER3-201ENST00000278544 TAS2R30P59541 319 aa10.52□□□□□ -0.73
ACER3-201ENST00000278544 RPP30P78346 268 aaKnown RBP10.52□□□□□ -0.73
ACER3-201ENST00000278544 PRSS57Q6UWY2 283 aa10.52□□□□□ -0.73
ACER3-201ENST00000278544 ZNF709Q8N972 641 aa10.52□□□□□ -0.73
ACER3-201ENST00000278544 TMEM147Q9BVK8 224 aa10.52□□□□□ -0.73
ACER3-201ENST00000278544 IGKV1OR2-108A0A075B7D4 117 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 MT-CO2P00403 227 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 AMY1AP04745 511 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 CEBPGP53567 150 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 ZNF90Q03938 601 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 GAMTQ14353 236 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 AKR1C8PQ5T2L2 129 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 PXDC1Q5TGL8 231 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 C10orf99Q6UWK7 81 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 COMMD7Q86VX2 200 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 STOML3Q8TAV4 291 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 ZFP92A6NM28 416 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 PDLIM3Q53GG5 364 aaPredicted RBP10.51□□□□□ -0.73
ACER3-201ENST00000278544 FFAR4Q5NUL3 377 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 SIGLECL1Q8N7X8 197 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 SFT2D1Q8WV19 159 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 C1RLQ9NZP8 487 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 CYSRT1A8MQ03 144 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 OR10J1P30954 320 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 ACSM6Q6P461 480 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 Q8N6K4 173 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 RPRMQ9NS64 109 aa10.51□□□□□ -0.73
ACER3-201ENST00000278544 OOSP1A8MZH6 123 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 GATA3P23771 443 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 ASPHD1Q5U4P2 390 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 BPIFCQ8NFQ6 507 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 NPCDR1Q9BY65 106 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 NDUFA3O95167 84 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 HSPB1P04792 205 aaKnown RBP10.5□□□□□ -0.73
ACER3-201ENST00000278544 FAM157CP0CG43 387 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 FAM122CQ6P4D5 195 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 ZNF562Q6V9R5 426 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 NPBQ8NG41 125 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 RNF141Q8WVD5 230 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 FOXC2Q99958 501 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 SPP1P10451 314 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 EIF5AP63241 154 aaKnown RBP10.5□□□□□ -0.73
ACER3-201ENST00000278544 SSX7Q7RTT5 188 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 SLC16A13Q7RTY0 426 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 C5orf56Q8N8D9 126 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 C11orf44Q8N8P7 122 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 OR4A5Q8NH83 315 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 MGST2Q99735 147 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 GINS3Q9BRX5 216 aa10.5□□□□□ -0.73
ACER3-201ENST00000278544 MFSD2BA6NFX1 497 aa10.49□□□□□ -0.73
ACER3-201ENST00000278544 CCL20P78556 96 aa10.49□□□□□ -0.73
ACER3-201ENST00000278544 SRSF3P84103 164 aaKnown RBP10.49□□□□□ -0.73
ACER3-201ENST00000278544 AARDQ4LEZ3 155 aa10.49□□□□□ -0.73
ACER3-201ENST00000278544 IGHV3-11P01762 117 aa10.49□□□□□ -0.73
ACER3-201ENST00000278544 C1orf159Q96HA4 380 aa10.49□□□□□ -0.73
ACER3-201ENST00000278544 UHRF2Q96PU4 802 aa10.49□□□□□ -0.73
ACER3-201ENST00000278544 PBDC1Q9BVG4 233 aa10.49□□□□□ -0.73
ACER3-201ENST00000278544 TMPRSS5Q9H3S3 457 aa10.49□□□□□ -0.73
ACER3-201ENST00000278544 MOB4Q9Y3A3 225 aa10.49□□□□□ -0.73
ACER3-201ENST00000278544 SUB1P53999 127 aaKnown RBP eCLIP10.49□□□□□ -0.73
ACER3-201ENST00000278544 EIF5AL1Q6IS14 154 aaKnown RBP10.49□□□□□ -0.73
ACER3-201ENST00000278544 SLC35E1Q96K37 410 aa10.49□□□□□ -0.73
ACER3-201ENST00000278544 RBM14Q96PK6 669 aaKnown RBP10.49□□□□□ -0.73
ACER3-201ENST00000278544 CACFD1Q9UGQ2 172 aa10.49□□□□□ -0.73
ACER3-201ENST00000278544 EGR2P11161 476 aaPredicted RBP10.48□□□□□ -0.73
ACER3-201ENST00000278544 NPVFQ9HCQ7 196 aa10.48□□□□□ -0.73
ACER3-201ENST00000278544 PRSS46E5RG02 174 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms