RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 NOX3Q9HBY0 568 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 CALML5Q9NZT1 146 aa3.42□□□□□ -1.86
CD44-202ENST00000278385 TNRC6AQ8NDV7 1962 aaKnown RBP3.42□□□□□ -1.86
CD44-202ENST00000278385 DOCK7Q96N67 2140 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 NBEAQ8NFP9 2946 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 TRAV36DV7A0A075B6V5 113 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 IGHV6-1A0A0B4J1U7 121 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 IGHV2-26A0A0B4J1V2 119 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 LOC389332A0A1B0GUA5 103 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 RPL37AP8A6NKH3 93 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.41□□□□□ -1.86
CD44-202ENST00000278385 RGS5O15539 181 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 ZNF354AO60765 605 aaPredicted RBP3.41□□□□□ -1.86
CD44-202ENST00000278385 KBTBD11O94819 623 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 NDUFC2O95298 119 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 IGLV2-11P01706 119 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 CLPSP04118 112 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 CCL3P10147 92 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 ORM2P19652 201 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 EMP1P54849 157 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 SYNJ2BPP57105 145 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 TAS2R19P59542 299 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 TMEM267Q0VDI3 215 aaPredicted RBP3.41□□□□□ -1.86
CD44-202ENST00000278385 DAZ2Q13117 558 aaKnown RBP3.41□□□□□ -1.86
CD44-202ENST00000278385 ZNF343Q6P1L6 599 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 RPS27LQ71UM5 84 aaKnown RBP3.41□□□□□ -1.86
CD44-202ENST00000278385 DAZ4Q86SG3 579 aaKnown RBP3.41□□□□□ -1.86
CD44-202ENST00000278385 C11orf53Q8IXP5 236 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 ZNF519Q8TB69 540 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 MBD3L1Q8WWY6 194 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 OR5P3Q8WZ94 311 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 GPR82Q96P67 336 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 LINC01587Q99440 93 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 TMEM147Q9BVK8 224 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 OR52D1Q9H346 318 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 ZNF702PQ9H963 129 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 PROK2Q9HC23 129 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 DAZ1Q9NQZ3 744 aaKnown RBP3.41□□□□□ -1.86
CD44-202ENST00000278385 DAZ3Q9NR90 486 aaKnown RBP3.41□□□□□ -1.86
CD44-202ENST00000278385 AIG1Q9NVV5 245 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 INSIG2Q9Y5U4 225 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 CHCHD2Q9Y6H1 151 aaPredicted RBP3.41□□□□□ -1.86
CD44-202ENST00000278385 PIEZO2Q9H5I5 2752 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 ATMQ13315 3056 aa3.41□□□□□ -1.86
CD44-202ENST00000278385 ANKRD12Q6UB98 2062 aa3.4□□□□□ -1.86
CD44-202ENST00000278385 TLN1Q9Y490 2541 aaKnown RBP3.4□□□□□ -1.86
CD44-202ENST00000278385 ESPL1Q14674 2120 aa3.4□□□□□ -1.86
CD44-202ENST00000278385 IGLV4-3A0A075B6K6 122 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 IGKV1-27A0A075B6S5 117 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 IGHV3-16A0A0C4DH30 117 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 A0A0G2JMM0 328 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 A0A1W2PPB8 328 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 A0A1W2PRS3 328 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 C5orf63A6NC05 138 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 KNCNA6PVL3 124 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 KIR3DP1A8MWS1 328 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 K7ERU9 68 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 BMPR1BO00238 502 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 SS18L1O75177 396 aaPredicted RBP3.4□□□□□ -1.87
CD44-202ENST00000278385 DUS4LO95620 317 aaKnown RBP3.4□□□□□ -1.87
CD44-202ENST00000278385 IGHV3-48P01763 117 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 SHBGP04278 402 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 CSN2P05814 226 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 IFI6P09912 130 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 TSPAN19P0C672 248 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 METTL15P1P0C7V9 234 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 GATA2P23769 480 aaPredicted RBP3.4□□□□□ -1.87
CD44-202ENST00000278385 BLVRBP30043 206 aaPredicted RBP3.4□□□□□ -1.87
CD44-202ENST00000278385 POLR2IP36954 125 aaKnown RBP3.4□□□□□ -1.87
CD44-202ENST00000278385 RBP2P50120 134 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 WNT4P56705 351 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 TNFAIP6P98066 277 aaPredicted RBP3.4□□□□□ -1.87
CD44-202ENST00000278385 IFITM3Q01628 133 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 REG3AQ06141 175 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 BAMBIQ13145 260 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 ERCC8Q13216 396 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 BTN1A1Q13410 526 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 PCM1Q15154 2024 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 KCNJ8Q15842 424 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 PRR4Q16378 134 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 LTC4SQ16873 150 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 C12orf74Q32Q52 190 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 IBA57Q5T440 356 aaKnown RBP3.4□□□□□ -1.87
CD44-202ENST00000278385 SCIMPQ6UWF3 145 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 ZNF493Q6ZR52 646 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 RNF165Q6ZSG1 346 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 TMEM252Q8N6L7 170 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 ZNF283Q8N7M2 679 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 LY6G5BQ8NDX9 201 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 OR52R1Q8NGF1 315 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 OR1J4Q8NGS1 313 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 OR1L1Q8NH94 360 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 STARD4Q96DR4 205 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 TSPAN32Q96QS1 320 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 ZNF184Q99676 751 aaPredicted RBP3.4□□□□□ -1.87
CD44-202ENST00000278385 MRPL20Q9BYC9 149 aaKnown RBP3.4□□□□□ -1.87
CD44-202ENST00000278385 EIF5A2Q9GZV4 153 aaKnown RBP3.4□□□□□ -1.87
CD44-202ENST00000278385 SLCO1B3Q9NPD5 702 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 CCL28Q9NRJ3 127 aa3.4□□□□□ -1.87
CD44-202ENST00000278385 U3KQ87 197 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms