RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 UBE2L3P68036 154 aaKnown RBP2.38□□□□□ -2.03
HERC4-201ENST00000277817 SLC35B1P78383 322 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 SERF2P84101 59 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 SRSF3P84103 164 aaKnown RBP2.38□□□□□ -2.03
HERC4-201ENST00000277817 SRSF1Q07955 248 aaKnown RBP eCLIP2.38□□□□□ -2.03
HERC4-201ENST00000277817 C5orf64Q2M2E5 130 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 PCSK4Q6UW60 755 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 ZNF383Q8NA42 475 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 OR2T6Q8NHC8 308 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 CA5BP1Q8WTZ4 195 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 FLYWCH2Q96CP2 140 aaKnown RBP2.38□□□□□ -2.03
HERC4-201ENST00000277817 LYZL4Q96KX0 146 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 MAP1LC3CQ9BXW4 147 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 RBKSQ9H477 322 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 PRORYQ9H606 182 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 MANBALQ9NQG1 85 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 IL36RNQ9UBH0 155 aa2.38□□□□□ -2.03
HERC4-201ENST00000277817 DNAH1Q9P2D7 4330 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 WDR87Q6ZQQ6 2873 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 ITPR3Q14573 2671 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 BAHCC1Q9P281 2608 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 MPDZO75970 2070 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 CDH23Q9H251 3354 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 IGLV3-12A0A075B6K2 115 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 TGIF2-C20orf24A0A0A6YYL0 155 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 C16orf97H3BN30 126 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 MGST3O14880 152 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 GATCO43716 136 aaKnown RBP2.37□□□□□ -2.03
HERC4-201ENST00000277817 ZG16O60844 167 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 ZNF253O75346 499 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 SRSF10O75494 262 aaKnown RBP2.37□□□□□ -2.03
HERC4-201ENST00000277817 HPRT1P00492 218 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 CRISP2P16562 243 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 NPY1RP25929 384 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 KIR2DS2P43631 304 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 KCNMB1Q16558 191 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 IQCJQ1A5X6 159 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 RPEL1Q2QD12 228 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 Q56UQ5 140 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 STPG1Q5TH74 334 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 MRPL54Q6P161 138 aaKnown RBP2.37□□□□□ -2.03
HERC4-201ENST00000277817 RNASEKQ6P5S7 137 aaKnown RBP2.37□□□□□ -2.03
HERC4-201ENST00000277817 C9orf139Q6ZV77 190 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 C16orf82Q7Z2V1 217 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 LRP11Q86VZ4 500 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 ABHD12Q8N2K0 398 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 ZNF441Q8N8Z8 693 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 OR8G5Q8NG78 346 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 SGMS2Q8NHU3 365 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 SPATA3Q8NHX4 192 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 OR5P3Q8WZ94 311 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 LINC00476Q8WZB0 136 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 TAF15Q92804 592 aaKnown RBP eCLIP2.37□□□□□ -2.03
HERC4-201ENST00000277817 ADTRPQ96IZ2 230 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 DCTN5Q9BTE1 182 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 VAMP8Q9BV40 100 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 DDA1Q9BW61 102 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 AAMDCQ9H7C9 122 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 HEXA-AS1Q9H8Q6 139 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 SIRT7Q9NRC8 400 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 CISD1Q9NZ45 108 aaKnown RBP2.37□□□□□ -2.03
HERC4-201ENST00000277817 OR51B2Q9Y5P1 312 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 IGHV3-72A0A0B4J1Y9 119 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 hCG_38984A0A1B0GV85 526 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 IGSF23A1L1A6 192 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 C5orf63A6NC05 138 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 RAB29O14966 203 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 KLF7O75840 302 aaPredicted RBP2.37□□□□□ -2.03
HERC4-201ENST00000277817 CLPSP04118 112 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 SP9P0CG40 484 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 SSTR5P35346 364 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 AMTP48728 403 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 LYZP61626 148 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 RANP62826 216 aaKnown RBP2.37□□□□□ -2.03
HERC4-201ENST00000277817 MEF2BQ02080 365 aaPredicted RBP2.37□□□□□ -2.03
HERC4-201ENST00000277817 P2RY6Q15077 328 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 GABRA6Q16445 453 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 FAM120AOSQ5T036 256 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 MIC13Q5XKP0 118 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 WDR25Q64LD2 544 aaPredicted RBP2.37□□□□□ -2.03
HERC4-201ENST00000277817 TGIF2LYQ8IUE0 185 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 LINC00518Q8N0U6 118 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 DRAM1Q8N682 238 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 ZNRF1Q8ND25 227 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 OR4X1Q8NH49 305 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 ITLN1Q8WWA0 313 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 VOPP1Q96AW1 172 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 NOL4LQ96MY1 436 aaPredicted RBP2.37□□□□□ -2.03
HERC4-201ENST00000277817 TM2D1Q9BX74 207 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 SMDT1Q9H4I9 107 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 NPVFQ9HCQ7 196 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 RPRMQ9NS64 109 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 INSIG2Q9Y5U4 225 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 A0A0A6YYD4 124 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 PDE6DO43924 150 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 S1PR2O95136 353 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 CXorf1O96002 111 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 IGHV3-48P01763 117 aa2.37□□□□□ -2.03
HERC4-201ENST00000277817 APOHP02749 345 aaPredicted RBP2.37□□□□□ -2.03
HERC4-201ENST00000277817 HSPB1P04792 205 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms