RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 OOSP1A8MZH6 123 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 TEX22C9J3V5 150 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 MOSP00540 346 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 ARL14EPLP0DKL9 152 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 AREGP15514 252 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 HOXB4P17483 251 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-201ENST00000276573 GATA2P23769 480 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-201ENST00000276573 GNB1P62873 340 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 SSBP2P81877 361 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-201ENST00000276573 MINOS1Q5TGZ0 78 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 SPATA31B1PQ5VZV4 182 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 SPNS3Q6ZMD2 512 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 CYP2G1PQ6ZSU1 146 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 NPBQ8NG41 125 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 OR4F5Q8NH21 305 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 NPIPB3Q92617 1050 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 ACY3Q96HD9 319 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 OR4F4Q96R69 305 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 C19orf24Q9BVV8 132 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 MINOS1-NBL1R4GNA1 71 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 B4DEV8 164 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 FOXH1O75593 365 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 TOX4O94842 621 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 PRB1P04280 392 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 CRYGCP07315 174 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 RNF224P0DH78 156 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 MFAP2P55001 183 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 LGALS4P56470 323 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 PNRC1Q12796 327 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-201ENST00000276573 PLGLAQ15195 96 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 DYNAPQ8N1N2 210 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 THAP8Q8NA92 274 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 NANPQ8TBE9 248 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 EAF1Q96JC9 268 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-201ENST00000276573 BBC3Q96PG8 261 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-201ENST00000276573 SPOCK3Q9BQ16 436 aa7.66□□□□□ -1.18
TRIM55-201ENST00000276573 KLF2Q9Y5W3 355 aaPredicted RBP7.66□□□□□ -1.18
TRIM55-201ENST00000276573 C11orf94C9JXX5 98 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 NBR2O15453 112 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 NDUFA3O95167 84 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 OR2C1O95371 312 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 MT-ND4LP03901 98 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 GCHFRP30047 84 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 MMDQ15546 238 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 SSX2Q16385 188 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 TMEM241Q24JQ0 296 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 FAM78BQ5VT40 261 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 ETFRF1Q6IPR1 90 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 CCDC144NLQ6NUI1 221 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 OR1P1Q8NH06 330 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 SRSF12Q8WXF0 261 aaKnown RBP7.65□□□□□ -1.18
TRIM55-201ENST00000276573 HIST1H2BAQ96A08 127 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 ISOC2Q96AB3 205 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 SMIM7Q9BQ49 75 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 TXNDC17Q9BRA2 123 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 MRPL36Q9P0J6 103 aaKnown RBP7.65□□□□□ -1.18
TRIM55-201ENST00000276573 FUT9Q9Y231 359 aa7.65□□□□□ -1.18
TRIM55-201ENST00000276573 IGKV1D-37A0A075B6S9 117 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 CLN5O75503 358 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 IGHV3-48P01763 117 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 CRYBA1P05813 215 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 APELAP0DMC3 54 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 NPPCP23582 126 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 CD24P25063 80 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 UBE2G2P60604 165 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 CST9LP1Q5W188 147 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 MIR17HGQ75NE6 70 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 OR2T10Q8NGZ9 312 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 RPUSD4Q96CM3 377 aaKnown RBP7.64□□□□□ -1.19
TRIM55-201ENST00000276573 MISP3Q96FF7 219 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 TBX15Q96SF7 602 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 CCL19Q99731 98 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 SRSF8Q9BRL6 282 aaKnown RBP7.64□□□□□ -1.19
TRIM55-201ENST00000276573 SLC25A33Q9BSK2 321 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 PARLQ9H300 379 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 NAT8Q9UHE5 227 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 F11RQ9Y624 299 aaKnown RBP7.64□□□□□ -1.19
TRIM55-201ENST00000276573 TCRBV4S1A1TA0A5B7 111 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 PSMB11A5LHX3 300 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 PDE6DO43924 150 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 CNIH1O95406 144 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 MT-CO2P00403 227 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 OR5G3P0C626 314 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 ATP5G3P48201 142 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 UBE2E1P51965 193 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 EBI3Q14213 229 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 HES1Q14469 280 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 ZNF674Q2M3X9 581 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 RNF212Q495C1 297 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 C19orf35Q6ZS72 473 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 FAM24BQ8N5W8 94 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 TMEM37Q8WXS4 190 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 YPEL4Q96NS1 127 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 DNAJC4Q9NNZ3 241 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 TECRQ9NZ01 308 aaKnown RBP7.64□□□□□ -1.19
TRIM55-201ENST00000276573 POLR3KQ9Y2Y1 108 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-201ENST00000276573 TBL2Q9Y4P3 447 aaKnown RBP7.64□□□□□ -1.19
TRIM55-201ENST00000276573 IGSF10Q6WRI0 2623 aa7.64□□□□□ -1.19
TRIM55-201ENST00000276573 CXorf65A6NEN9 183 aa7.63□□□□□ -1.19
TRIM55-201ENST00000276573 F6UZH7 168 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms