RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 TEX15Q9BXT5 2789 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 NKX6-3A6NJ46 265 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 ZNF324O75467 553 aaPredicted RBP8.47□□□□□ -1.05
UPF3B-201ENST00000276201 NDUFB8O95169 186 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 AMY1AP04745 511 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 OR9G9P0C7N8 305 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 IER3P46695 156 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 PCP4P48539 62 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 MS4A5Q9H3V2 200 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 TBL2Q9Y4P3 447 aaKnown RBP8.47□□□□□ -1.05
UPF3B-201ENST00000276201 LRBAP50851 2863 aa8.46□□□□□ -1.05
UPF3B-201ENST00000276201 HRNRQ86YZ3 2850 aaPredicted RBP8.46□□□□□ -1.05
UPF3B-201ENST00000276201 A0A1W2PS18 150 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 HYPMO75409 117 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 THBDP07204 575 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 IGHV1-2P23083 117 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 FOXG1P55316 489 aaPredicted RBP8.46□□□□□ -1.06
UPF3B-201ENST00000276201 OR52L2PQ8NGH6 319 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 OR4P4Q8NGL7 312 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 C19orf24Q9BVV8 132 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 SMIM27A0A1W2PRY6 76 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 LINC00473A8K010 186 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 LYZL6O75951 148 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 ATP5IP56385 69 aaPredicted RBP8.46□□□□□ -1.06
UPF3B-201ENST00000276201 PRR20EP86478 221 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 PRR20CP86479 221 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 PRR20DP86480 221 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 PRR20BP86481 221 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 PRR20AP86496 221 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 RAB31Q13636 194 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 EFNB3Q15768 340 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 TBC1D28Q2M2D7 210 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 MIC13Q5XKP0 118 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 NIT1Q86X76 327 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 COQ2Q96H96 371 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 C1orf159Q96HA4 380 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 COMMD5Q9GZQ3 224 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 RNF114Q9Y508 228 aa8.46□□□□□ -1.06
UPF3B-201ENST00000276201 ABCA4P78363 2273 aa8.45□□□□□ -1.06
UPF3B-201ENST00000276201 PRR14LQ5THK1 2151 aa8.45□□□□□ -1.06
UPF3B-201ENST00000276201 TET2Q6N021 2002 aaPredicted RBP8.45□□□□□ -1.06
UPF3B-201ENST00000276201 IGHV2-26A0A0B4J1V2 119 aa8.45□□□□□ -1.06
UPF3B-201ENST00000276201 DEFA4P12838 97 aa8.45□□□□□ -1.06
UPF3B-201ENST00000276201 THBS3P49746 956 aa8.45□□□□□ -1.06
UPF3B-201ENST00000276201 HNRNPA3P51991 378 aaKnown RBP8.45□□□□□ -1.06
UPF3B-201ENST00000276201 KLF5Q13887 457 aaPredicted RBP8.45□□□□□ -1.06
UPF3B-201ENST00000276201 CR1LQ2VPA4 569 aa8.45□□□□□ -1.06
UPF3B-201ENST00000276201 SAPCD1Q5SSQ6 148 aa8.45□□□□□ -1.06
UPF3B-201ENST00000276201 LEMD1Q68G75 181 aa8.45□□□□□ -1.06
UPF3B-201ENST00000276201 BHLHA15Q7RTS1 189 aaPredicted RBP8.45□□□□□ -1.06
UPF3B-201ENST00000276201 STPG4Q8N801 248 aa8.45□□□□□ -1.06
UPF3B-201ENST00000276201 TUBG2Q9NRH3 451 aa8.45□□□□□ -1.06
UPF3B-201ENST00000276201 C1RLQ9NZP8 487 aa8.45□□□□□ -1.06
UPF3B-201ENST00000276201 IL19Q9UHD0 177 aa8.45□□□□□ -1.06
UPF3B-201ENST00000276201 DEFB108AA8MXU0 73 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 F2Z2F3 143 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 SLC17A3O00476 420 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 PSPNO60542 156 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 SMPD2O60906 423 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 CD33P20138 364 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 CDKN1BP46527 198 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 AMTP48728 403 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 SELENOVP59797 346 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 KRTDAPP60985 99 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 RELBQ01201 579 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 UBE2V1Q13404 147 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 TEPPQ6URK8 271 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 OR4A16Q8NH70 328 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 PDZD2O15018 2839 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 SPG11Q96JI7 2443 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 IZUMO1RA6ND01 250 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 DPRXA6NFQ7 191 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 C15orf65H3BRN8 121 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 TCF21O43680 179 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 RBMXL2O75526 392 aaKnown RBP8.44□□□□□ -1.06
UPF3B-201ENST00000276201 C3orf79P0CE67 100 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 GNG4P50150 75 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 ZNF83P51522 516 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 RBX1P62877 108 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 MMDQ15546 238 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 OR8I2Q8N0Y5 310 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 NEUROG1Q92886 237 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 SLC35D1Q9NTN3 355 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 NAT8BQ9UHF3 227 aa8.44□□□□□ -1.06
UPF3B-201ENST00000276201 HELTA6NFD8 242 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 BMPR1BO00238 502 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 GOSR1O95249 250 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 LOXP28300 417 aaPredicted RBP8.43□□□□□ -1.06
UPF3B-201ENST00000276201 PRAMEF5Q5TYX0 476 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 C9orf135Q5VTT2 229 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 PRAMEF6Q5VXH4 476 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 ACP7Q6ZNF0 438 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 FAM231DQ6ZW35 169 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 MDP1Q86V88 176 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 WFDC8Q8IUA0 241 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 UBALD1Q8TB05 177 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 NCOR1P1Q9H4R4 102 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 HEYLQ9NQ87 328 aaPredicted RBP8.43□□□□□ -1.06
UPF3B-201ENST00000276201 BET1LQ9NYM9 111 aa8.43□□□□□ -1.06
UPF3B-201ENST00000276201 JPT1Q9UK76 154 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms