RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 HNF1AP20823 631 aa16.4■□□□□ 0.22
RAB5A-201ENST00000273047 RELQ04864 619 aaPredicted RBP16.4■□□□□ 0.22
RAB5A-201ENST00000273047 NEIL1Q96FI4 390 aaPredicted RBP16.4■□□□□ 0.22
RAB5A-201ENST00000273047 HARBI1Q96MB7 349 aa16.4■□□□□ 0.22
RAB5A-201ENST00000273047 GAL3ST2Q9H3Q3 398 aa16.4■□□□□ 0.22
RAB5A-201ENST00000273047 PLEKHA3Q9HB20 300 aa16.4■□□□□ 0.22
RAB5A-201ENST00000273047 SPTBN1Q01082 2364 aaKnown RBP16.39■□□□□ 0.22
RAB5A-201ENST00000273047 IGHV3-48P01763 117 aa16.39■□□□□ 0.21
RAB5A-201ENST00000273047 TMPRSS3P57727 454 aa16.39■□□□□ 0.21
RAB5A-201ENST00000273047 TEPPQ6URK8 271 aa16.39■□□□□ 0.21
RAB5A-201ENST00000273047 ADTRPQ96IZ2 230 aa16.39■□□□□ 0.21
RAB5A-201ENST00000273047 NAGKQ9UJ70 344 aa16.39■□□□□ 0.21
RAB5A-201ENST00000273047 IGKV1OR2-108A0A075B7D4 117 aa16.39■□□□□ 0.21
RAB5A-201ENST00000273047 A0A1B0GUS0 222 aa16.39■□□□□ 0.21
RAB5A-201ENST00000273047 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.39■□□□□ 0.21
RAB5A-201ENST00000273047 SFTPCP11686 197 aa16.39■□□□□ 0.21
RAB5A-201ENST00000273047 C10orf55Q5SWW7 151 aa16.39■□□□□ 0.21
RAB5A-201ENST00000273047 TMEM256Q8N2U0 113 aa16.39■□□□□ 0.21
RAB5A-201ENST00000273047 ZNF114Q8NC26 417 aa16.39■□□□□ 0.21
RAB5A-201ENST00000273047 OR10X1Q8NGY0 326 aa16.39■□□□□ 0.21
RAB5A-201ENST00000273047 FAM216AQ8WUB2 273 aa16.39■□□□□ 0.21
RAB5A-201ENST00000273047 RITA1Q96K30 269 aa16.39■□□□□ 0.21
RAB5A-201ENST00000273047 COL25A1Q9BXS0 654 aaPredicted RBP16.39■□□□□ 0.21
RAB5A-201ENST00000273047 IGHV3-72A0A0B4J1Y9 119 aa16.38■□□□□ 0.21
RAB5A-201ENST00000273047 NDUFB3O43676 98 aa16.38■□□□□ 0.21
RAB5A-201ENST00000273047 CHRNA7P36544 502 aa16.38■□□□□ 0.21
RAB5A-201ENST00000273047 CDSNQ15517 529 aa16.38■□□□□ 0.21
RAB5A-201ENST00000273047 EFNB3Q15768 340 aa16.38■□□□□ 0.21
RAB5A-201ENST00000273047 ZNF833PQ6ZTB9 187 aa16.38■□□□□ 0.21
RAB5A-201ENST00000273047 NUPR1O60356 82 aa16.38■□□□□ 0.21
RAB5A-201ENST00000273047 IL3RAP26951 378 aa16.38■□□□□ 0.21
RAB5A-201ENST00000273047 H0YJW9 148 aa16.37■□□□□ 0.21
RAB5A-201ENST00000273047 MPDU1O75352 247 aa16.37■□□□□ 0.21
RAB5A-201ENST00000273047 RPL29P47914 159 aaKnown RBP16.37■□□□□ 0.21
RAB5A-201ENST00000273047 RPL15P61313 204 aaKnown RBP16.37■□□□□ 0.21
RAB5A-201ENST00000273047 FAM78BQ5VT40 261 aa16.37■□□□□ 0.21
RAB5A-201ENST00000273047 KCNIP4Q6PIL6 250 aa16.37■□□□□ 0.21
RAB5A-201ENST00000273047 LOXP28300 417 aaPredicted RBP16.37■□□□□ 0.21
RAB5A-201ENST00000273047 OR10J1P30954 320 aa16.37■□□□□ 0.21
RAB5A-201ENST00000273047 PRCDQ00LT1 54 aa16.37■□□□□ 0.21
RAB5A-201ENST00000273047 TMEM208Q9BTX3 173 aa16.37■□□□□ 0.21
RAB5A-201ENST00000273047 PRNDQ9UKY0 176 aa16.37■□□□□ 0.21
RAB5A-201ENST00000273047 YTHDF2Q9Y5A9 579 aaKnown RBP16.37■□□□□ 0.21
RAB5A-201ENST00000273047 LCN2P80188 198 aa16.36■□□□□ 0.21
RAB5A-201ENST00000273047 LRRC10Q5BKY1 277 aa16.36■□□□□ 0.21
RAB5A-201ENST00000273047 MS4A10Q96PG2 267 aa16.36■□□□□ 0.21
RAB5A-201ENST00000273047 RAXQ9Y2V3 346 aa16.36■□□□□ 0.21
RAB5A-201ENST00000273047 TRAPPC1Q9Y5R8 145 aa16.36■□□□□ 0.21
RAB5A-201ENST00000273047 ZFHX3Q15911 3703 aa16.36■□□□□ 0.21
RAB5A-201ENST00000273047 SCO2A0A1W2PP80 73 aa16.36■□□□□ 0.21
RAB5A-201ENST00000273047 VENTXO95231 258 aa16.36■□□□□ 0.21
RAB5A-201ENST00000273047 STAG3L2P0CL84 134 aa16.36■□□□□ 0.21
RAB5A-201ENST00000273047 STAG3L3P0CL85 134 aa16.36■□□□□ 0.21
RAB5A-201ENST00000273047 POU2AF1Q16633 256 aa16.36■□□□□ 0.21
RAB5A-201ENST00000273047 TPSG1Q9NRR2 321 aa16.36■□□□□ 0.21
RAB5A-201ENST00000273047 TRBV20OR9-2A0A075B6H5 130 aa16.35■□□□□ 0.21
RAB5A-201ENST00000273047 A0A0U1RQK1 487 aa16.35■□□□□ 0.21
RAB5A-201ENST00000273047 ZNF320A2RRD8 509 aa16.35■□□□□ 0.21
RAB5A-201ENST00000273047 ZNF705FA8MVS1 300 aaPredicted RBP16.35■□□□□ 0.21
RAB5A-201ENST00000273047 TNFRSF13BO14836 293 aaPredicted RBP16.35■□□□□ 0.21
RAB5A-201ENST00000273047 LY6HO94772 140 aa16.35■□□□□ 0.21
RAB5A-201ENST00000273047 ZNF705DP0CH99 300 aaPredicted RBP16.35■□□□□ 0.21
RAB5A-201ENST00000273047 ZNF705BP0CI00 300 aaPredicted RBP16.35■□□□□ 0.21
RAB5A-201ENST00000273047 ZNF705AQ6ZN79 300 aaPredicted RBP16.35■□□□□ 0.21
RAB5A-201ENST00000273047 OR4P4Q8NGL7 312 aa16.35■□□□□ 0.21
RAB5A-201ENST00000273047 DLEU1O43261 78 aa16.35■□□□□ 0.21
RAB5A-201ENST00000273047 C1QTNF9P0C862 333 aa16.35■□□□□ 0.21
RAB5A-201ENST00000273047 APELAP0DMC3 54 aa16.35■□□□□ 0.21
RAB5A-201ENST00000273047 MEF2CQ06413 473 aaPredicted RBP16.35■□□□□ 0.21
RAB5A-201ENST00000273047 MIR17HGQ75NE6 70 aa16.35■□□□□ 0.21
RAB5A-201ENST00000273047 OR9G1Q8NH87 305 aa16.35■□□□□ 0.21
RAB5A-201ENST00000273047 TBX15Q96SF7 602 aa16.35■□□□□ 0.21
RAB5A-201ENST00000273047 RALYQ9UKM9 306 aaKnown RBP16.35■□□□□ 0.21
RAB5A-201ENST00000273047 A6NNC1 897 aa16.34■□□□□ 0.21
RAB5A-201ENST00000273047 RAB1CQ92928 201 aa16.34■□□□□ 0.21
RAB5A-201ENST00000273047 GOLT1BQ9Y3E0 138 aa16.34■□□□□ 0.21
RAB5A-201ENST00000273047 MED13LQ71F56 2210 aa16.34■□□□□ 0.21
RAB5A-201ENST00000273047 IGHV1-69-2A0A0G2JMI3 117 aa16.34■□□□□ 0.21
RAB5A-201ENST00000273047 SIAH2O43255 324 aa16.34■□□□□ 0.21
RAB5A-201ENST00000273047 OR2T6Q8NHC8 308 aa16.34■□□□□ 0.21
RAB5A-201ENST00000273047 FLYWCH2Q96CP2 140 aaKnown RBP16.34■□□□□ 0.21
RAB5A-201ENST00000273047 IMMP2LQ96T52 175 aa16.34■□□□□ 0.21
RAB5A-201ENST00000273047 APOA2P02652 100 aa16.33■□□□□ 0.2
RAB5A-201ENST00000273047 REG1AP05451 166 aa16.33■□□□□ 0.2
RAB5A-201ENST00000273047 LINC00869P0C866 280 aa16.33■□□□□ 0.2
RAB5A-201ENST00000273047 SSBP2P81877 361 aaPredicted RBP16.33■□□□□ 0.2
RAB5A-201ENST00000273047 TMEM144Q7Z5S9 345 aa16.33■□□□□ 0.2
RAB5A-201ENST00000273047 VPS13CQ709C8 3753 aa16.33■□□□□ 0.2
RAB5A-201ENST00000273047 M0QZK8 103 aa16.33■□□□□ 0.2
RAB5A-201ENST00000273047 RPLP1P05386 114 aaKnown RBP16.33■□□□□ 0.2
RAB5A-201ENST00000273047 NPSP0C0P6 89 aa16.33■□□□□ 0.2
RAB5A-201ENST00000273047 RBPJQ06330 500 aa16.33■□□□□ 0.2
RAB5A-201ENST00000273047 LINC01551Q86U37 167 aa16.33■□□□□ 0.2
RAB5A-201ENST00000273047 OR5AN1Q8NGI8 311 aa16.33■□□□□ 0.2
RAB5A-201ENST00000273047 VKORC1Q9BQB6 163 aa16.33■□□□□ 0.2
RAB5A-201ENST00000273047 CXorf1O96002 111 aa16.32■□□□□ 0.2
RAB5A-201ENST00000273047 RNASE2P10153 161 aaKnown RBP16.32■□□□□ 0.2
RAB5A-201ENST00000273047 CD33P20138 364 aa16.32■□□□□ 0.2
RAB5A-201ENST00000273047 NABP2Q9BQ15 211 aa16.32■□□□□ 0.2
RAB5A-201ENST00000273047 COMMD5Q9GZQ3 224 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms