RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 PRR20EP86478 221 aa7.1□□□□□ -1.27
TRIM43-201ENST00000272395 PRR20CP86479 221 aa7.1□□□□□ -1.27
TRIM43-201ENST00000272395 PRR20DP86480 221 aa7.1□□□□□ -1.27
TRIM43-201ENST00000272395 PRR20BP86481 221 aa7.1□□□□□ -1.27
TRIM43-201ENST00000272395 PRR20AP86496 221 aa7.1□□□□□ -1.27
TRIM43-201ENST00000272395 TNFAIP6P98066 277 aaPredicted RBP7.1□□□□□ -1.27
TRIM43-201ENST00000272395 SPRNQ5BIV9 151 aa7.1□□□□□ -1.27
TRIM43-201ENST00000272395 ARSJQ5FYB0 599 aaPredicted RBP7.1□□□□□ -1.27
TRIM43-201ENST00000272395 MIC13Q5XKP0 118 aa7.1□□□□□ -1.27
TRIM43-201ENST00000272395 ZNF788Q6ZQV5 615 aa7.1□□□□□ -1.27
TRIM43-201ENST00000272395 VKORC1L1Q8N0U8 176 aa7.1□□□□□ -1.27
TRIM43-201ENST00000272395 PNKDQ8N490 385 aa7.1□□□□□ -1.27
TRIM43-201ENST00000272395 TMEM18Q96B42 140 aa7.1□□□□□ -1.27
TRIM43-201ENST00000272395 SFRP2Q96HF1 295 aa7.1□□□□□ -1.27
TRIM43-201ENST00000272395 GCM1Q9NP62 436 aa7.1□□□□□ -1.27
TRIM43-201ENST00000272395 YLPM1P49750 1951 aaKnown RBP7.1□□□□□ -1.27
TRIM43-201ENST00000272395 NOTCH2Q04721 2471 aa7.1□□□□□ -1.27
TRIM43-201ENST00000272395 SPG11Q96JI7 2443 aa7.1□□□□□ -1.27
TRIM43-201ENST00000272395 CA2P00918 260 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 IGHV1-46P01743 117 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 DEFA4P12838 97 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 IRF2P14316 349 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 IL3RAP26951 378 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 CHRNA7P36544 502 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 PPOXP50336 477 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 RPL15P61313 204 aaKnown RBP7.09□□□□□ -1.27
TRIM43-201ENST00000272395 PRCDQ00LT1 54 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 MEF2CQ06413 473 aaPredicted RBP7.09□□□□□ -1.27
TRIM43-201ENST00000272395 GAMTQ14353 236 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 TEX36Q5VZQ5 186 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 SLC25A48Q6ZT89 311 aaKnown RBP7.09□□□□□ -1.27
TRIM43-201ENST00000272395 LYG1Q8N1E2 194 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 STPG3Q8N7X2 389 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 MBD6Q96DN6 1003 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 C1orf159Q96HA4 380 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 SLC35E1Q96K37 410 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 GAFA1Q96PS6 74 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 TMEM167BQ9NRX6 74 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 BEX4Q9NWD9 120 aaPredicted RBP7.09□□□□□ -1.27
TRIM43-201ENST00000272395 RPUSD1Q9UJJ7 312 aaKnown RBP7.09□□□□□ -1.27
TRIM43-201ENST00000272395 FUT9Q9Y231 359 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 OR51B2Q9Y5P1 312 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 AKAP9Q99996 3911 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 CSMD1Q96PZ7 3565 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 NAV2Q8IVL1 2488 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 hADV38S2A0JD32 116 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 NKX6-3A6NJ46 265 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 C17orf100A8MU93 164 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 LYNX1G3V0Z9 82 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 UPK2O00526 184 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 LYNX1P0DP58 116 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 PAX1P15863 534 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 CNN1P51911 297 aaKnown RBP7.09□□□□□ -1.27
TRIM43-201ENST00000272395 CCL8P80075 99 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 C2orf83Q53S99 150 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 FAM78BQ5VT40 261 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 TEX38Q6PEX7 206 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 OR10G8Q8NGN5 311 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 OR5B3Q8NH48 314 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 TMEM37Q8WXS4 190 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 GAL3ST2Q9H3Q3 398 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 PLEKHA3Q9HB20 300 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 BET1LQ9NYM9 111 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 SLC45A2Q9UMX9 530 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 LINC00312Q9Y6C7 94 aa7.09□□□□□ -1.27
TRIM43-201ENST00000272395 PLCE1Q9P212 2302 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 TRBV20OR9-2A0A075B6H5 130 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 TRBV23-1A0A0A0MS06 115 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 A0A0U1RQK1 487 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 ZNF320A2RRD8 509 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 INS-IGF2F8WCM5 200 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 J3QR06 171 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 GZMBP10144 247 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 TNFRSF1AP19438 455 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 DDTP30046 118 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 YPEL3P61236 119 aaPredicted RBP7.08□□□□□ -1.28
TRIM43-201ENST00000272395 RPL19P84098 196 aaKnown RBP7.08□□□□□ -1.28
TRIM43-201ENST00000272395 LBHQ53QV2 105 aaPredicted RBP7.08□□□□□ -1.28
TRIM43-201ENST00000272395 C9orf152Q5JTZ5 239 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 CDPF1Q6NVV7 123 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 C1orf229Q6ZS94 237 aaPredicted RBP7.08□□□□□ -1.28
TRIM43-201ENST00000272395 TCF23Q7RTU1 214 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 REC114Q7Z4M0 266 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 KRTAP1-3Q8IUG1 177 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 OR1L8Q8NGR8 309 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 SGMS2Q8NHU3 365 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 OSR1Q8TAX0 266 aaPredicted RBP7.08□□□□□ -1.28
TRIM43-201ENST00000272395 SSMEM1Q8WWF3 244 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 NOL4LQ96MY1 436 aaPredicted RBP7.08□□□□□ -1.28
TRIM43-201ENST00000272395 RNF2Q99496 336 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 DERL1Q9BUN8 251 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 YTHDF2Q9Y5A9 579 aaKnown RBP7.08□□□□□ -1.28
TRIM43-201ENST00000272395 TRAPPC1Q9Y5R8 145 aa7.08□□□□□ -1.28
TRIM43-201ENST00000272395 OTOGQ6ZRI0 2925 aa7.07□□□□□ -1.28
TRIM43-201ENST00000272395 TEX15Q9BXT5 2789 aa7.07□□□□□ -1.28
TRIM43-201ENST00000272395 TRBV9A0A0B4J1U6 114 aa7.07□□□□□ -1.28
TRIM43-201ENST00000272395 SCO2A0A1W2PP80 73 aa7.07□□□□□ -1.28
TRIM43-201ENST00000272395 IGHV3-7P01780 117 aa7.07□□□□□ -1.28
TRIM43-201ENST00000272395 LINC00869P0C866 280 aa7.07□□□□□ -1.28
TRIM43-201ENST00000272395 EFNA4P52798 201 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms