RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 PVRIGQ6DKI7 326 aa9.81□□□□□ -0.84
SS18-202ENST00000269138 CLEC19AQ6UXS0 136 aa9.81□□□□□ -0.84
SS18-202ENST00000269138 OR1L6Q8NGR2 347 aa9.81□□□□□ -0.84
SS18-202ENST00000269138 ZNF502Q8TBZ5 544 aa9.81□□□□□ -0.84
SS18-202ENST00000269138 DTD1Q8TEA8 209 aa9.81□□□□□ -0.84
SS18-202ENST00000269138 SCARB1Q8WTV0 552 aa9.81□□□□□ -0.84
SS18-202ENST00000269138 TMEM170AQ8WVE7 144 aa9.81□□□□□ -0.84
SS18-202ENST00000269138 DCUN1D4Q92564 292 aa9.81□□□□□ -0.84
SS18-202ENST00000269138 DLX4Q92988 240 aaPredicted RBP9.81□□□□□ -0.84
SS18-202ENST00000269138 EEF1AKMT3Q96AZ1 226 aa9.81□□□□□ -0.84
SS18-202ENST00000269138 RANGRFQ9HD47 186 aaPredicted RBP9.81□□□□□ -0.84
SS18-202ENST00000269138 PALMDQ9NP74 551 aa9.81□□□□□ -0.84
SS18-202ENST00000269138 THYN1Q9P016 225 aa9.81□□□□□ -0.84
SS18-202ENST00000269138 I3L2K1 104 aa9.8□□□□□ -0.84
SS18-202ENST00000269138 PTTG1O95997 202 aa9.8□□□□□ -0.84
SS18-202ENST00000269138 MT-CO2P00403 227 aa9.8□□□□□ -0.84
SS18-202ENST00000269138 OR8U8P0C7N1 319 aa9.8□□□□□ -0.84
SS18-202ENST00000269138 IAPPP10997 89 aa9.8□□□□□ -0.84
SS18-202ENST00000269138 IGLL1P15814 213 aa9.8□□□□□ -0.84
SS18-202ENST00000269138 HOXD3P31249 432 aaPredicted RBP9.8□□□□□ -0.84
SS18-202ENST00000269138 MLANAQ16655 118 aa9.8□□□□□ -0.84
SS18-202ENST00000269138 IAH1Q2TAA2 248 aaPredicted RBP9.8□□□□□ -0.84
SS18-202ENST00000269138 OR4D5Q8NGN0 318 aa9.8□□□□□ -0.84
SS18-202ENST00000269138 VN1R17PQ8TDU5 208 aa9.8□□□□□ -0.84
SS18-202ENST00000269138 PINX1Q96BK5 328 aaKnown RBP9.8□□□□□ -0.84
SS18-202ENST00000269138 CXorf58Q96LI9 332 aa9.8□□□□□ -0.84
SS18-202ENST00000269138 GPN1Q9HCN4 374 aaPredicted RBP9.8□□□□□ -0.84
SS18-202ENST00000269138 ZC4H2Q9NQZ6 224 aa9.8□□□□□ -0.84
SS18-202ENST00000269138 GSKIPQ9P0R6 139 aa9.8□□□□□ -0.84
SS18-202ENST00000269138 CACFD1Q9UGQ2 172 aa9.8□□□□□ -0.84
SS18-202ENST00000269138 TRBV7-1A0A0A6YYK4 115 aa9.79□□□□□ -0.84
SS18-202ENST00000269138 SNRPGP15A8MWD9 76 aa9.79□□□□□ -0.84
SS18-202ENST00000269138 FAM25EA8MYX2 175 aa9.79□□□□□ -0.84
SS18-202ENST00000269138 FAM90A26D6RGX4 464 aa9.79□□□□□ -0.84
SS18-202ENST00000269138 PRAF2O60831 178 aa9.79□□□□□ -0.84
SS18-202ENST00000269138 CLEC3BP05452 202 aa9.79□□□□□ -0.84
SS18-202ENST00000269138 HTR2BP41595 481 aa9.79□□□□□ -0.84
SS18-202ENST00000269138 SUB1P53999 127 aaKnown RBP eCLIP9.79□□□□□ -0.84
SS18-202ENST00000269138 POLR2GP62487 172 aaKnown RBP eCLIP9.79□□□□□ -0.84
SS18-202ENST00000269138 ID3Q02535 119 aa9.79□□□□□ -0.84
SS18-202ENST00000269138 OXLD1Q5BKU9 147 aa9.79□□□□□ -0.84
SS18-202ENST00000269138 ZBTB8BQ8NAP8 495 aaPredicted RBP9.79□□□□□ -0.84
SS18-202ENST00000269138 SLC24A4Q8NFF2 622 aa9.79□□□□□ -0.84
SS18-202ENST00000269138 HIPK2Q9H2X6 1198 aa9.79□□□□□ -0.84
SS18-202ENST00000269138 NOTCH3Q9UM47 2321 aa9.79□□□□□ -0.84
SS18-202ENST00000269138 C5orf51A6NDU8 294 aa9.78□□□□□ -0.84
SS18-202ENST00000269138 F8W735 103 aaPredicted RBP9.78□□□□□ -0.84
SS18-202ENST00000269138 G3V4G9 280 aa9.78□□□□□ -0.84
SS18-202ENST00000269138 SYNGR2O43760 224 aa9.78□□□□□ -0.84
SS18-202ENST00000269138 OR2C1O95371 312 aa9.78□□□□□ -0.84
SS18-202ENST00000269138 IFNA10P01566 189 aa9.78□□□□□ -0.84
SS18-202ENST00000269138 GPR183P32249 361 aa9.78□□□□□ -0.84
SS18-202ENST00000269138 C2orf83Q53S99 150 aa9.78□□□□□ -0.84
SS18-202ENST00000269138 FNDC4Q9H6D8 234 aaPredicted RBP9.78□□□□□ -0.84
SS18-202ENST00000269138 C21orf62Q9NYP8 219 aa9.78□□□□□ -0.84
SS18-202ENST00000269138 OR2T8A6NH00 312 aa9.77□□□□□ -0.84
SS18-202ENST00000269138 WRBO00258 174 aa9.77□□□□□ -0.84
SS18-202ENST00000269138 OVOL1O14753 267 aa9.77□□□□□ -0.84
SS18-202ENST00000269138 MED6O75586 246 aa9.77□□□□□ -0.84
SS18-202ENST00000269138 SIX6O95475 246 aa9.77□□□□□ -0.84
SS18-202ENST00000269138 SCGB1D2O95969 90 aa9.77□□□□□ -0.84
SS18-202ENST00000269138 ZP3P21754 424 aa9.77□□□□□ -0.84
SS18-202ENST00000269138 NPY1RP25929 384 aa9.77□□□□□ -0.84
SS18-202ENST00000269138 ARL3P36405 182 aa9.77□□□□□ -0.84
SS18-202ENST00000269138 NKX2-1P43699 371 aaPredicted RBP9.77□□□□□ -0.84
SS18-202ENST00000269138 SYNJ2BPP57105 145 aa9.77□□□□□ -0.84
SS18-202ENST00000269138 KLF5Q13887 457 aaPredicted RBP9.77□□□□□ -0.84
SS18-202ENST00000269138 C1QL4Q86Z23 238 aa9.77□□□□□ -0.84
SS18-202ENST00000269138 MRPL36Q9P0J6 103 aaKnown RBP9.77□□□□□ -0.84
SS18-202ENST00000269138 IGHV3-35A0A0C4DH35 117 aa9.77□□□□□ -0.85
SS18-202ENST00000269138 MBPP02686 304 aaPredicted RBP9.77□□□□□ -0.85
SS18-202ENST00000269138 TATDN3Q17R31 274 aa9.77□□□□□ -0.85
SS18-202ENST00000269138 RPEL1Q2QD12 228 aa9.77□□□□□ -0.85
SS18-202ENST00000269138 Q56UQ5 140 aa9.77□□□□□ -0.85
SS18-202ENST00000269138 UBAC2Q8NBM4 344 aa9.77□□□□□ -0.85
SS18-202ENST00000269138 RCC1LQ96I51 464 aaKnown RBP9.77□□□□□ -0.85
SS18-202ENST00000269138 C2orf50Q96LR7 162 aa9.77□□□□□ -0.85
SS18-202ENST00000269138 CHRDL1Q9BU40 450 aa9.77□□□□□ -0.85
SS18-202ENST00000269138 ALG5Q9Y673 324 aa9.77□□□□□ -0.85
SS18-202ENST00000269138 U3KQ87 197 aa9.77□□□□□ -0.85
SS18-202ENST00000269138 NBEAL1Q6ZS30 2694 aa9.76□□□□□ -0.85
SS18-202ENST00000269138 C7orf66A4D0T2 115 aa9.76□□□□□ -0.85
SS18-202ENST00000269138 C15orf62A8K5M9 175 aa9.76□□□□□ -0.85
SS18-202ENST00000269138 GOSR2O14653 212 aa9.76□□□□□ -0.85
SS18-202ENST00000269138 TGOLN2O43493 480 aa9.76□□□□□ -0.85
SS18-202ENST00000269138 SSSCA1O60232 199 aa9.76□□□□□ -0.85
SS18-202ENST00000269138 GGCTO75223 188 aaKnown RBP9.76□□□□□ -0.85
SS18-202ENST00000269138 TMEM50AO95807 157 aa9.76□□□□□ -0.85
SS18-202ENST00000269138 ADMP35318 185 aa9.76□□□□□ -0.85
SS18-202ENST00000269138 OPRK1P41145 380 aa9.76□□□□□ -0.85
SS18-202ENST00000269138 MFAP4P55083 255 aa9.76□□□□□ -0.85
SS18-202ENST00000269138 RGS21Q2M5E4 152 aa9.76□□□□□ -0.85
SS18-202ENST00000269138 FAM209BQ5JX69 171 aa9.76□□□□□ -0.85
SS18-202ENST00000269138 SAMD5Q5TGI4 173 aa9.76□□□□□ -0.85
SS18-202ENST00000269138 ACSM6Q6P461 480 aa9.76□□□□□ -0.85
SS18-202ENST00000269138 GSG1LQ6UXU4 331 aa9.76□□□□□ -0.85
SS18-202ENST00000269138 OR4C12Q96R67 309 aa9.76□□□□□ -0.85
SS18-202ENST00000269138 SEC14L6B5MCN3 397 aa9.75□□□□□ -0.85
SS18-202ENST00000269138 H3BP45 60 aa9.75□□□□□ -0.85
SS18-202ENST00000269138 CORTO00230 105 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms