RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 IL6RP08887 468 aaPredicted RBP6.58□□□□□ -1.36
USP3-201ENST00000268049 DLX6P56179 175 aa6.58□□□□□ -1.36
USP3-201ENST00000268049 DMRTC2Q8IXT2 367 aaPredicted RBP6.58□□□□□ -1.36
USP3-201ENST00000268049 HIST3H2BBQ8N257 126 aa6.58□□□□□ -1.36
USP3-201ENST00000268049 ORAOV1Q8WV07 137 aa6.58□□□□□ -1.36
USP3-201ENST00000268049 TMEM54Q969K7 222 aa6.58□□□□□ -1.36
USP3-201ENST00000268049 CITED2Q99967 270 aaPredicted RBP6.58□□□□□ -1.36
USP3-201ENST00000268049 FOXA2Q9Y261 457 aaPredicted RBP6.58□□□□□ -1.36
USP3-201ENST00000268049 PCM1Q15154 2024 aa6.58□□□□□ -1.36
USP3-201ENST00000268049 LY6G6EA0A0G2JKS1 128 aa6.58□□□□□ -1.36
USP3-201ENST00000268049 RPL36A-HNRNPH2H7BZ11 118 aa6.58□□□□□ -1.36
USP3-201ENST00000268049 VENTXO95231 258 aa6.58□□□□□ -1.36
USP3-201ENST00000268049 LHX2P50458 406 aa6.58□□□□□ -1.36
USP3-201ENST00000268049 TMEM249Q2WGJ8 235 aa6.58□□□□□ -1.36
USP3-201ENST00000268049 C9orf66Q5T8R8 295 aa6.58□□□□□ -1.36
USP3-201ENST00000268049 U3KQA8 63 aa6.58□□□□□ -1.36
USP3-201ENST00000268049 ANKRD36A6QL64 1941 aa6.58□□□□□ -1.36
USP3-201ENST00000268049 NPFFO15130 113 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 KLF4O43474 513 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 TNFSF13O75888 250 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 CD8AP01732 235 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 ASAH2BP0C7U1 165 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 ARTNQ5T4W7 220 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 OR4X1Q8NH49 305 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 SDHCQ99643 169 aaPredicted RBP6.57□□□□□ -1.36
USP3-201ENST00000268049 RBKSQ9H477 322 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 TRBV5-3A0A0A0MS03 114 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 CDC42EP2O14613 210 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 CKS2P33552 79 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 SHISA2Q6UWI4 295 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 SPANXA1Q9NS26 97 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 SPRR3Q9UBC9 169 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 TRAV39A0A0B4J263 110 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 OR11H12B2RN74 326 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 RFPL3SP0C7P2 107 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 C1orf194Q5T5A4 169 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 TEPPQ6URK8 271 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 HOGA1Q86XE5 327 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 MDS2Q8NDY4 140 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 OR11H1Q8NG94 326 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 OR11H2Q8NH07 326 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 TMEM170AQ8WVE7 144 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 PCNX2A6NKB5 2137 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 CENPVL1A0A0U1RR11 272 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 TEX48A0A1B0GUV7 120 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 TMEM250H0YL14 139 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 TGFBR3LH3BV60 316 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 PRSS2P07478 247 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 ZNF735P0CB33 412 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 LGALS3P17931 250 aaKnown RBP6.57□□□□□ -1.36
USP3-201ENST00000268049 WNT5AP41221 380 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 SRSF6Q13247 344 aaKnown RBP6.57□□□□□ -1.36
USP3-201ENST00000268049 PRSS53Q2L4Q9 553 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 VAX1Q5SQQ9 334 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 MRGPRFQ96AM1 343 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 ZNF414Q96IQ9 312 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 FBXL7Q9UJT9 491 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 FCGR3AP08637 254 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 SEC11AP67812 179 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 UNC119Q13432 240 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 SLC25A47Q6Q0C1 308 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 GPR82Q96P67 336 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 PAXXQ9BUH6 204 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 BPESC1Q9GZL8 116 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 CCL28Q9NRJ3 127 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 RPRMQ9NS64 109 aa6.57□□□□□ -1.36
USP3-201ENST00000268049 TMSB15BA0A087X1C1 80 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 ANOS1P23352 680 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 TDGF1P3P51864 188 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 ATP5IP56385 69 aaPredicted RBP6.56□□□□□ -1.36
USP3-201ENST00000268049 HIST1H1AQ02539 215 aaPredicted RBP6.56□□□□□ -1.36
USP3-201ENST00000268049 PYY3Q5JQD4 70 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 PSMG4Q5JS54 123 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.56□□□□□ -1.36
USP3-201ENST00000268049 PTX4Q96A99 478 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 TRAV8-6A0A0B4J262 113 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 H3BUX3 64 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 GPX1P07203 203 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 FAM159AQ6UWV7 190 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 ACP7Q6ZNF0 438 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 PQLC2Q6ZP29 291 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 COPS9Q8WXC6 57 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 ABHD14BQ96IU4 210 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 AICDAQ9GZX7 198 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 COL6A6A6NMZ7 2263 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 C2orf16Q68DN1 1984 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 UCP3P55916 312 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 C3orf36Q3SXR2 165 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 SPANXN1Q5VSR9 72 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 OR9G4Q8NGQ1 327 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 MAP1LC3AQ9H492 121 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 PIEZO1Q92508 2521 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 COLCA2A8K830 154 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 C17orf51A8MQB3 221 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 NBR2O15453 112 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 RAMP1O60894 148 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 SERF1AO75920 110 aa6.56□□□□□ -1.36
USP3-201ENST00000268049 ZNF324BQ6AW86 544 aaPredicted RBP6.56□□□□□ -1.36
USP3-201ENST00000268049 FAM53AQ6NSI3 398 aaPredicted RBP6.56□□□□□ -1.36
USP3-201ENST00000268049 LCNL1Q6ZST4 164 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms