RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 RPP25LQ8N5L8 163 aaKnown RBP12.99□□□□□ -0.33
TPM1-201ENST00000267996 LFNGQ8NES3 379 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 PIFOQ8TCI5 191 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 SSMEM1Q8WWF3 244 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 RCC1LQ96I51 464 aaKnown RBP12.99□□□□□ -0.33
TPM1-201ENST00000267996 Q96MF0 132 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 FNDC4Q9H6D8 234 aaPredicted RBP12.99□□□□□ -0.33
TPM1-201ENST00000267996 AGPAT2O15120 278 aa12.98□□□□□ -0.33
TPM1-201ENST00000267996 HLA-DRB1P01911 266 aa12.98□□□□□ -0.33
TPM1-201ENST00000267996 CRYGCP07315 174 aa12.98□□□□□ -0.33
TPM1-201ENST00000267996 RAB2AP61019 212 aa12.98□□□□□ -0.33
TPM1-201ENST00000267996 AKR1C1Q04828 323 aa12.98□□□□□ -0.33
TPM1-201ENST00000267996 TMEM249Q2WGJ8 235 aa12.98□□□□□ -0.33
TPM1-201ENST00000267996 MAPK1IP1LQ8NDC0 245 aa12.98□□□□□ -0.33
TPM1-201ENST00000267996 FAM210AQ96ND0 272 aa12.98□□□□□ -0.33
TPM1-201ENST00000267996 KCNIP2Q9NS61 270 aa12.98□□□□□ -0.33
TPM1-201ENST00000267996 NBPF19A0A087WUL8 3843 aa12.98□□□□□ -0.33
TPM1-201ENST00000267996 CREBBPQ92793 2442 aa12.97□□□□□ -0.33
TPM1-201ENST00000267996 KRBOX1C9JBD0 128 aa12.97□□□□□ -0.33
TPM1-201ENST00000267996 TGFAP01135 160 aa12.97□□□□□ -0.33
TPM1-201ENST00000267996 HBE1P02100 147 aa12.97□□□□□ -0.33
TPM1-201ENST00000267996 CD5P06127 495 aa12.97□□□□□ -0.33
TPM1-201ENST00000267996 CTRB1P17538 263 aa12.97□□□□□ -0.33
TPM1-201ENST00000267996 ZP3P21754 424 aa12.97□□□□□ -0.33
TPM1-201ENST00000267996 SRSF3P84103 164 aaKnown RBP12.97□□□□□ -0.33
TPM1-201ENST00000267996 RAB31Q13636 194 aa12.97□□□□□ -0.33
TPM1-201ENST00000267996 CTRB2Q6GPI1 263 aa12.97□□□□□ -0.33
TPM1-201ENST00000267996 DMRT1Q9Y5R6 373 aa12.97□□□□□ -0.33
TPM1-201ENST00000267996 ABCA1O95477 2261 aa12.97□□□□□ -0.33
TPM1-201ENST00000267996 PRRC2AP48634 2157 aaKnown RBP12.97□□□□□ -0.33
TPM1-201ENST00000267996 IGKV1OR2-108A0A075B7D4 117 aa12.96□□□□□ -0.33
TPM1-201ENST00000267996 CORTO00230 105 aa12.96□□□□□ -0.33
TPM1-201ENST00000267996 YIF1AO95070 293 aa12.96□□□□□ -0.33
TPM1-201ENST00000267996 APELAP0DMC3 54 aa12.96□□□□□ -0.33
TPM1-201ENST00000267996 M6PRP20645 277 aa12.96□□□□□ -0.33
TPM1-201ENST00000267996 RPL29P47914 159 aaKnown RBP12.96□□□□□ -0.33
TPM1-201ENST00000267996 BPIFB3P59826 476 aa12.96□□□□□ -0.33
TPM1-201ENST00000267996 CCL20P78556 96 aa12.96□□□□□ -0.33
TPM1-201ENST00000267996 NDPQ00604 133 aa12.96□□□□□ -0.33
TPM1-201ENST00000267996 ACOT6Q3I5F7 207 aaPredicted RBP12.96□□□□□ -0.33
TPM1-201ENST00000267996 SSX7Q7RTT5 188 aa12.96□□□□□ -0.33
TPM1-201ENST00000267996 BPIFCQ8NFQ6 507 aa12.96□□□□□ -0.33
TPM1-201ENST00000267996 SFT2D1Q8WV19 159 aa12.96□□□□□ -0.33
TPM1-201ENST00000267996 ARPC1AQ92747 370 aa12.96□□□□□ -0.33
TPM1-201ENST00000267996 SLC35E1Q96K37 410 aa12.96□□□□□ -0.33
TPM1-201ENST00000267996 LINC00052Q96N35 136 aa12.96□□□□□ -0.33
TPM1-201ENST00000267996 SLC45A2Q9UMX9 530 aa12.96□□□□□ -0.33
TPM1-201ENST00000267996 PXMP4Q9Y6I8 212 aa12.96□□□□□ -0.33
TPM1-201ENST00000267996 IGHV7-81A0A0B4J1V7 117 aa12.96□□□□□ -0.34
TPM1-201ENST00000267996 PRR20EP86478 221 aa12.96□□□□□ -0.34
TPM1-201ENST00000267996 PRR20CP86479 221 aa12.96□□□□□ -0.34
TPM1-201ENST00000267996 PRR20DP86480 221 aa12.96□□□□□ -0.34
TPM1-201ENST00000267996 PRR20BP86481 221 aa12.96□□□□□ -0.34
TPM1-201ENST00000267996 PRR20AP86496 221 aa12.96□□□□□ -0.34
TPM1-201ENST00000267996 C19orf35Q6ZS72 473 aa12.96□□□□□ -0.34
TPM1-201ENST00000267996 OR10G4Q8NGN3 311 aa12.96□□□□□ -0.34
TPM1-201ENST00000267996 OR10G9Q8NGN4 311 aa12.96□□□□□ -0.34
TPM1-201ENST00000267996 OR10G7Q8NGN6 311 aa12.96□□□□□ -0.34
TPM1-201ENST00000267996 OR2T6Q8NHC8 308 aa12.96□□□□□ -0.34
TPM1-201ENST00000267996 ABHD5Q8WTS1 349 aa12.96□□□□□ -0.34
TPM1-201ENST00000267996 CSPG4Q6UVK1 2322 aa12.95□□□□□ -0.34
TPM1-201ENST00000267996 SVEP1Q4LDE5 3571 aa12.95□□□□□ -0.34
TPM1-201ENST00000267996 SEC14L6B5MCN3 397 aa12.95□□□□□ -0.34
TPM1-201ENST00000267996 FSHBP01225 129 aa12.95□□□□□ -0.34
TPM1-201ENST00000267996 LINC00869P0C866 280 aa12.95□□□□□ -0.34
TPM1-201ENST00000267996 EGR2P11161 476 aaPredicted RBP12.95□□□□□ -0.34
TPM1-201ENST00000267996 ASPHD1Q5U4P2 390 aa12.95□□□□□ -0.34
TPM1-201ENST00000267996 MIC13Q5XKP0 118 aa12.95□□□□□ -0.34
TPM1-201ENST00000267996 ETFRF1Q6IPR1 90 aa12.95□□□□□ -0.34
TPM1-201ENST00000267996 THAP8Q8NA92 274 aa12.95□□□□□ -0.34
TPM1-201ENST00000267996 RBM14Q96PK6 669 aaKnown RBP12.95□□□□□ -0.34
TPM1-201ENST00000267996 RASL11BQ9BPW5 248 aa12.95□□□□□ -0.34
TPM1-201ENST00000267996 WNT10AQ9GZT5 417 aa12.95□□□□□ -0.34
TPM1-201ENST00000267996 FAM96BQ9Y3D0 163 aa12.95□□□□□ -0.34
TPM1-201ENST00000267996 SOX21Q9Y651 276 aaPredicted RBP12.95□□□□□ -0.34
TPM1-201ENST00000267996 CTXND1A0A1B0GTU2 59 aa12.94□□□□□ -0.34
TPM1-201ENST00000267996 TMEM218A2RU14 115 aa12.94□□□□□ -0.34
TPM1-201ENST00000267996 NPIPB5A8MRT5 1133 aa12.94□□□□□ -0.34
TPM1-201ENST00000267996 TSPAN9O75954 239 aa12.94□□□□□ -0.34
TPM1-201ENST00000267996 FBP1P09467 338 aa12.94□□□□□ -0.34
TPM1-201ENST00000267996 GUK1Q16774 197 aa12.94□□□□□ -0.34
TPM1-201ENST00000267996 OR1L6Q8NGR2 347 aa12.94□□□□□ -0.34
TPM1-201ENST00000267996 MISP3Q96FF7 219 aa12.94□□□□□ -0.34
TPM1-201ENST00000267996 SSX3Q99909 188 aa12.94□□□□□ -0.34
TPM1-201ENST00000267996 FAM103A1Q9BTL3 118 aaKnown RBP12.94□□□□□ -0.34
TPM1-201ENST00000267996 ACTR3CQ9C0K3 210 aaPredicted RBP12.94□□□□□ -0.34
TPM1-201ENST00000267996 MRPL36Q9P0J6 103 aaKnown RBP12.94□□□□□ -0.34
TPM1-201ENST00000267996 CYB5BO43169 146 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 B2MP61769 119 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 PMS2P11Q13670 270 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 LCN15Q6UWW0 184 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 TTC9CQ8N5M4 171 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 STPG3Q8N7X2 389 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 C5orf56Q8N8D9 126 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 ACY3Q96HD9 319 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 SLC39A9Q9NUM3 307 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 GCN1Q92616 2671 aaKnown RBP12.93□□□□□ -0.34
TPM1-201ENST00000267996 A0A1B0GV50 99 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 MAP1LC3B2A6NCE7 125 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 I3L2K1 104 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms