RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 FAM106CPP0CH98 169 aa9.21□□□□□ -0.93
SCAF11-201ENST00000266589 DEFA4P12838 97 aa9.21□□□□□ -0.93
SCAF11-201ENST00000266589 PPT1P50897 306 aa9.21□□□□□ -0.93
SCAF11-201ENST00000266589 CACNG8Q8WXS5 425 aa9.21□□□□□ -0.93
SCAF11-201ENST00000266589 SLC35E1Q96K37 410 aa9.21□□□□□ -0.93
SCAF11-201ENST00000266589 RARRES2Q99969 163 aa9.21□□□□□ -0.93
SCAF11-201ENST00000266589 ACTR3CQ9C0K3 210 aaPredicted RBP9.21□□□□□ -0.93
SCAF11-201ENST00000266589 ANKRD17O75179 2603 aaKnown RBP9.21□□□□□ -0.94
SCAF11-201ENST00000266589 IGHV1-69DA0A0B4J2H0 117 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 HMGB3O15347 200 aaKnown RBP9.2□□□□□ -0.94
SCAF11-201ENST00000266589 YIF1AO95070 293 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 IGHV1-69P01742 117 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 BRS3P32247 399 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 B2MP61769 119 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 DEFA5Q01523 94 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 HAGHQ16775 308 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 GCSAMLQ5JQS6 135 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 FAM120AOSQ5T036 256 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 C19orf35Q6ZS72 473 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 STPG3Q8N7X2 389 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 ABHD5Q8WTS1 349 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 FNDC4Q9H6D8 234 aaPredicted RBP9.2□□□□□ -0.94
SCAF11-201ENST00000266589 BEX4Q9NWD9 120 aaPredicted RBP9.2□□□□□ -0.94
SCAF11-201ENST00000266589 USP9YO00507 2555 aaPredicted RBP9.2□□□□□ -0.94
SCAF11-201ENST00000266589 CELSR2Q9HCU4 2923 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 IGKV1OR2-108A0A075B7D4 117 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 CYB5BO43169 146 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 CDC34P49427 236 aaPredicted RBP9.2□□□□□ -0.94
SCAF11-201ENST00000266589 MFAP2P55001 183 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 FXYD3Q14802 87 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 DEFB113Q30KQ7 82 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 BRD3OSQ6XYD6 125 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 OR2T6Q8NHC8 308 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 MISP3Q96FF7 219 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 ACY3Q96HD9 319 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 SEC11CQ9BY50 192 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 C7orf69Q9H7B7 122 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 GNG13Q9P2W3 67 aa9.2□□□□□ -0.94
SCAF11-201ENST00000266589 A0A096LNT2 108 aa9.19□□□□□ -0.94
SCAF11-201ENST00000266589 RPL29P47914 159 aaKnown RBP9.19□□□□□ -0.94
SCAF11-201ENST00000266589 C10orf91Q5T1B1 145 aa9.19□□□□□ -0.94
SCAF11-201ENST00000266589 PVRIGQ6DKI7 326 aa9.19□□□□□ -0.94
SCAF11-201ENST00000266589 OR1P1Q8NH06 330 aa9.19□□□□□ -0.94
SCAF11-201ENST00000266589 RAB24Q969Q5 203 aa9.19□□□□□ -0.94
SCAF11-201ENST00000266589 SRSF8Q9BRL6 282 aaKnown RBP9.19□□□□□ -0.94
SCAF11-201ENST00000266589 FAM103A1Q9BTL3 118 aaKnown RBP9.19□□□□□ -0.94
SCAF11-201ENST00000266589 HIF1ANQ9NWT6 349 aa9.19□□□□□ -0.94
SCAF11-201ENST00000266589 CARHSP1Q9Y2V2 147 aaKnown RBP9.19□□□□□ -0.94
SCAF11-201ENST00000266589 F11RQ9Y624 299 aaKnown RBP9.19□□□□□ -0.94
SCAF11-201ENST00000266589 ZFP92A6NM28 416 aa9.19□□□□□ -0.94
SCAF11-201ENST00000266589 SEC14L6B5MCN3 397 aa9.19□□□□□ -0.94
SCAF11-201ENST00000266589 IGHV3-48P01763 117 aa9.19□□□□□ -0.94
SCAF11-201ENST00000266589 OR10J1P30954 320 aa9.19□□□□□ -0.94
SCAF11-201ENST00000266589 PRR20EP86478 221 aa9.19□□□□□ -0.94
SCAF11-201ENST00000266589 PRR20CP86479 221 aa9.19□□□□□ -0.94
SCAF11-201ENST00000266589 PRR20DP86480 221 aa9.19□□□□□ -0.94
SCAF11-201ENST00000266589 PRR20BP86481 221 aa9.19□□□□□ -0.94
SCAF11-201ENST00000266589 PRR20AP86496 221 aa9.19□□□□□ -0.94
SCAF11-201ENST00000266589 SLC45A2Q9UMX9 530 aa9.19□□□□□ -0.94
SCAF11-201ENST00000266589 CSMD2Q7Z408 3487 aa9.18□□□□□ -0.94
SCAF11-201ENST00000266589 CENPEQ02224 2701 aa9.18□□□□□ -0.94
SCAF11-201ENST00000266589 TRAV20A0A0B4J274 112 aa9.18□□□□□ -0.94
SCAF11-201ENST00000266589 A0A1W2PPV4 95 aa9.18□□□□□ -0.94
SCAF11-201ENST00000266589 CORTO00230 105 aa9.18□□□□□ -0.94
SCAF11-201ENST00000266589 IGHV4-38-2P0DP08 117 aa9.18□□□□□ -0.94
SCAF11-201ENST00000266589 CX3CL1P78423 397 aa9.18□□□□□ -0.94
SCAF11-201ENST00000266589 ICAM4Q14773 271 aa9.18□□□□□ -0.94
SCAF11-201ENST00000266589 GUCA2BQ16661 112 aa9.18□□□□□ -0.94
SCAF11-201ENST00000266589 ZNF506Q5JVG8 444 aa9.18□□□□□ -0.94
SCAF11-201ENST00000266589 NPIPB3Q92617 1050 aa9.18□□□□□ -0.94
SCAF11-201ENST00000266589 SMDT1Q9H4I9 107 aa9.18□□□□□ -0.94
SCAF11-201ENST00000266589 C1RLQ9NZP8 487 aa9.18□□□□□ -0.94
SCAF11-201ENST00000266589 LOC102723971A0A1B0GUV8 181 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 LINC00869P0C866 280 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 ETFRF1Q6IPR1 90 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 ATRAIDQ6UW56 229 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 ZNF562Q6V9R5 426 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 LRRC75A-AS1Q8N1F1 130 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 SVBPQ8N300 66 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 Q8N9W7 124 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 LINC01356Q8N9X3 169 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 MAPK1IP1LQ8NDC0 245 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 RXFP4Q8TDU9 374 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 ARPC1AQ92747 370 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 SLC35B3Q9H1N7 401 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 TMPRSS5Q9H3S3 457 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 MRPL36Q9P0J6 103 aaKnown RBP9.17□□□□□ -0.94
SCAF11-201ENST00000266589 DMRT1Q9Y5R6 373 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 A0A0U1RQK1 487 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 BCL2P10415 239 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 CTRB1P17538 263 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 GATA2P23769 480 aaPredicted RBP9.17□□□□□ -0.94
SCAF11-201ENST00000266589 GATA3P23771 443 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 RND2P52198 227 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 NDPQ00604 133 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 KHDC3LQ587J8 217 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 Q5PR19 223 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 HIST2H2BCQ6DN03 193 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 CTRB2Q6GPI1 263 aa9.17□□□□□ -0.94
SCAF11-201ENST00000266589 IQCF2Q8IXL9 164 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms