RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 RNF126Q9BV68 326 aa15.08■□□□□ 0.01
COL5A3-201ENST00000264828 RBMY1BA6NDE4 496 aaKnown RBP15.08■□□□□ 0
COL5A3-201ENST00000264828 RBMY1EA6NEQ0 496 aaKnown RBP15.08■□□□□ 0
COL5A3-201ENST00000264828 NPIPB13A6NJU9 1138 aa15.08■□□□□ 0
COL5A3-201ENST00000264828 RBMY1DP0C7P1 496 aaKnown RBP15.08■□□□□ 0
COL5A3-201ENST00000264828 RBMY1A1P0DJD3 496 aaKnown RBP15.08■□□□□ 0
COL5A3-201ENST00000264828 RBMY1CP0DJD4 496 aa15.08■□□□□ 0
COL5A3-201ENST00000264828 GLRXP35754 106 aa15.08■□□□□ 0
COL5A3-201ENST00000264828 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.08■□□□□ 0
COL5A3-201ENST00000264828 IGHV2OR16-5A0A0B4J2B6 119 aa15.08■□□□□ 0
COL5A3-201ENST00000264828 TM4SF5O14894 197 aa15.08■□□□□ 0
COL5A3-201ENST00000264828 RAMP3O60896 148 aa15.08■□□□□ 0
COL5A3-201ENST00000264828 SAA2-SAA4A0A096LPE2 208 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 EFEMP2O95967 443 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 SAA2P0DJI9 122 aaPredicted RBP15.07■□□□□ 0
COL5A3-201ENST00000264828 PPIFP30405 207 aaKnown RBP15.07■□□□□ 0
COL5A3-201ENST00000264828 TIMM23BQ5SRD1 257 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 TMEM170AQ8WVE7 144 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 DEPPQ9NTK1 212 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 IGKV1D-13A0A0B4J2D9 117 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 IGKV1-13P0DP09 117 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 BTCP35070 178 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 CSRP3P50461 194 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 PRR31Q5SQ13 230 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 CFAP161Q6P656 301 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 PYYP10082 97 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 TEX29Q8N6K0 151 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 VKORC1Q9BQB6 163 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 A0A0G2JMZ2 1700 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 LRRC37A2A6NM11 1700 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 PSG7Q13046 419 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 C1QTNF5Q9BXJ0 243 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 ZNF257Q9Y2Q1 563 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 SCN8AQ9UQD0 1980 aa15.07■□□□□ 0
COL5A3-201ENST00000264828 IGHV1-2P23083 117 aa15.06■□□□□ 0
COL5A3-201ENST00000264828 TRGV2A0A075B6R0 118 aa15.06■□□□□ 0
COL5A3-201ENST00000264828 CCL3L1P16619 93 aa15.06■□□□□ 0
COL5A3-201ENST00000264828 PAX2Q02962 417 aa15.06■□□□□ 0
COL5A3-201ENST00000264828 OTORQ9NRC9 128 aa15.06■□□□□ 0
COL5A3-201ENST00000264828 A6NNC1 897 aa15.06■□□□□ 0
COL5A3-201ENST00000264828 CD7P09564 240 aa15.06■□□□□ 0
COL5A3-201ENST00000264828 CD24P25063 80 aa15.06■□□□□ 0
COL5A3-201ENST00000264828 FBLN7Q53RD9 439 aa15.06■□□□□ 0
COL5A3-201ENST00000264828 WFDC12Q8WWY7 111 aa15.06■□□□□ 0
COL5A3-201ENST00000264828 C5orf30Q96GV9 206 aa15.06■□□□□ 0
COL5A3-201ENST00000264828 NR2C2APQ86WQ0 139 aa15.06■□□□□ 0
COL5A3-201ENST00000264828 COQ2Q96H96 371 aa15.06■□□□□ 0
COL5A3-201ENST00000264828 TRAV2A0A0B4J234 112 aa15.05■□□□□ 0
COL5A3-201ENST00000264828 IGHV3-64A0A075B6Q5 118 aa15.05■□□□□ 0
COL5A3-201ENST00000264828 A0A1B0GW15 77 aa15.05■□□□□ -0
COL5A3-201ENST00000264828 J3QW42 95 aa15.05■□□□□ -0
COL5A3-201ENST00000264828 TRAV9-1A0A075B6T8 112 aa15.05■□□□□ -0
COL5A3-201ENST00000264828 PTPRFP10586 1907 aa15.05■□□□□ -0
COL5A3-201ENST00000264828 IGFBP3P17936 291 aaPredicted RBP15.05■□□□□ -0
COL5A3-201ENST00000264828 SELENOKQ9Y6D0 94 aa15.05■□□□□ -0
COL5A3-201ENST00000264828 MALP21145 153 aa15.04■□□□□ -0
COL5A3-201ENST00000264828 ST20Q9HBF5 79 aa15.04■□□□□ -0
COL5A3-201ENST00000264828 Q6AWC8 147 aa15.04■□□□□ -0
COL5A3-201ENST00000264828 WFDC1Q9HC57 220 aa15.04■□□□□ -0
COL5A3-201ENST00000264828 CSRP2Q16527 193 aa15.04■□□□□ -0
COL5A3-201ENST00000264828 SCN2AQ99250 2005 aa15.04■□□□□ -0
COL5A3-201ENST00000264828 LHX2P50458 406 aa15.04■□□□□ -0
COL5A3-201ENST00000264828 A0A1B0GTI1 187 aa15.03■□□□□ -0
COL5A3-201ENST00000264828 PAX1P15863 534 aa15.03■□□□□ -0
COL5A3-201ENST00000264828 LYZL4Q96KX0 146 aa15.03■□□□□ -0
COL5A3-201ENST00000264828 PDCD11Q14690 1871 aaKnown RBP15.03■□□□□ -0
COL5A3-201ENST00000264828 ZNF585BQ52M93 769 aa15.03■□□□□ -0
COL5A3-201ENST00000264828 VSIRQ9H7M9 311 aa15.03■□□□□ -0
COL5A3-201ENST00000264828 LTBP1Q14766 1721 aa15.03■□□□□ -0
COL5A3-201ENST00000264828 VCX2Q9H322 139 aa15.03■□□□□ -0
COL5A3-201ENST00000264828 CCL20P78556 96 aa15.03■□□□□ -0
COL5A3-201ENST00000264828 RTN4RL2Q86UN3 420 aa15.03■□□□□ -0
COL5A3-201ENST00000264828 A0A0G2JLM5 398 aa15.03■□□□□ -0
COL5A3-201ENST00000264828 TMEM42Q69YG0 159 aa15.03■□□□□ -0
COL5A3-201ENST00000264828 DNAJC13O75165 2243 aa15.03■□□□□ -0
COL5A3-201ENST00000264828 ZNF815PA8K554 130 aa15.02■□□□□ -0
COL5A3-201ENST00000264828 UPK2O00526 184 aa15.02■□□□□ -0
COL5A3-201ENST00000264828 TRAV21A0A0B4J279 112 aa15.02□□□□□ -0.01
COL5A3-201ENST00000264828 A0A0U1RRA0 63 aa15.02□□□□□ -0.01
COL5A3-201ENST00000264828 UMODP07911 640 aa15.02□□□□□ -0.01
COL5A3-201ENST00000264828 CACNG8Q8WXS5 425 aa15.02□□□□□ -0.01
COL5A3-201ENST00000264828 HIST1H2BKO60814 126 aa15.02□□□□□ -0.01
COL5A3-201ENST00000264828 HIST1H2BJP06899 126 aa15.02□□□□□ -0.01
COL5A3-201ENST00000264828 HIST1H2BOP23527 126 aa15.02□□□□□ -0.01
COL5A3-201ENST00000264828 HIST1H2BBP33778 126 aa15.02□□□□□ -0.01
COL5A3-201ENST00000264828 HIST1H2BDP58876 126 aa15.02□□□□□ -0.01
COL5A3-201ENST00000264828 HIST1H2BCP62807 126 aa15.02□□□□□ -0.01
COL5A3-201ENST00000264828 HIST2H2BEQ16778 126 aa15.02□□□□□ -0.01
COL5A3-201ENST00000264828 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.02□□□□□ -0.01
COL5A3-201ENST00000264828 LY6G6FQ5SQ64 297 aa15.02□□□□□ -0.01
COL5A3-201ENST00000264828 HIST1H2BHQ93079 126 aa15.02□□□□□ -0.01
COL5A3-201ENST00000264828 HIST1H2BNQ99877 126 aa15.02□□□□□ -0.01
COL5A3-201ENST00000264828 HIST1H2BMQ99879 126 aa15.02□□□□□ -0.01
COL5A3-201ENST00000264828 EPDR1Q9UM22 224 aa15.02□□□□□ -0.01
COL5A3-201ENST00000264828 TRBV6-7A0A0A0MS04 114 aa15.01□□□□□ -0.01
COL5A3-201ENST00000264828 HOXA3O43365 443 aaPredicted RBP15.01□□□□□ -0.01
COL5A3-201ENST00000264828 KIR3DL3Q8N743 410 aa15.01□□□□□ -0.01
COL5A3-201ENST00000264828 CHTOPQ9Y3Y2 248 aaKnown RBP15.01□□□□□ -0.01
COL5A3-201ENST00000264828 C15orf61A6NNL5 157 aa15.01□□□□□ -0.01
COL5A3-201ENST00000264828 DPM2O94777 84 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms