RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 TMEM177Q53S58 311 aa13.52□□□□□ -0.25
GPC1-201ENST00000264039 OR52E5Q8NH55 327 aa13.52□□□□□ -0.25
GPC1-201ENST00000264039 TMEM186Q96B77 213 aa13.52□□□□□ -0.25
GPC1-201ENST00000264039 POM121L2Q96KW2 1035 aa13.52□□□□□ -0.25
GPC1-201ENST00000264039 THSD7BQ9C0I4 1608 aa13.52□□□□□ -0.25
GPC1-201ENST00000264039 PGPA6NDG6 321 aa13.52□□□□□ -0.25
GPC1-201ENST00000264039 OR2K2Q8NGT1 345 aa13.52□□□□□ -0.25
GPC1-201ENST00000264039 TNFRSF19Q9NS68 423 aa13.52□□□□□ -0.25
GPC1-201ENST00000264039 SSUH2Q9Y2M2 353 aa13.52□□□□□ -0.25
GPC1-201ENST00000264039 J3QR89 54 aa13.51□□□□□ -0.25
GPC1-201ENST00000264039 TBR1Q16650 682 aa13.51□□□□□ -0.25
GPC1-201ENST00000264039 Q8IYB0 196 aa13.51□□□□□ -0.25
GPC1-201ENST00000264039 OR1L4Q8NGR5 311 aa13.51□□□□□ -0.25
GPC1-201ENST00000264039 OR10AG1Q8NH19 301 aa13.51□□□□□ -0.25
GPC1-201ENST00000264039 SFXN3Q9BWM7 321 aa13.51□□□□□ -0.25
GPC1-201ENST00000264039 YLPM1P49750 1951 aaKnown RBP13.51□□□□□ -0.25
GPC1-201ENST00000264039 FAM162BQ5T6X4 162 aa13.51□□□□□ -0.25
GPC1-201ENST00000264039 MTURNQ8N3F0 131 aa13.51□□□□□ -0.25
GPC1-201ENST00000264039 SARAFQ96BY9 339 aa13.51□□□□□ -0.25
GPC1-201ENST00000264039 HSPB8Q9UJY1 196 aa13.51□□□□□ -0.25
GPC1-201ENST00000264039 NXPH1P58417 271 aa13.51□□□□□ -0.25
GPC1-201ENST00000264039 SPACA3Q8IXA5 215 aa13.51□□□□□ -0.25
GPC1-201ENST00000264039 OR9G1Q8NH87 305 aa13.51□□□□□ -0.25
GPC1-201ENST00000264039 LRRC29Q8WV35 223 aa13.51□□□□□ -0.25
GPC1-201ENST00000264039 PERPQ96FX8 193 aa13.51□□□□□ -0.25
GPC1-201ENST00000264039 PAXXQ9BUH6 204 aa13.51□□□□□ -0.25
GPC1-201ENST00000264039 FGF23Q9GZV9 251 aaPredicted RBP13.51□□□□□ -0.25
GPC1-201ENST00000264039 CELA3AP09093 270 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 FABP2P12104 132 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 REG1BP48304 166 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 FER1L6-AS1Q8NA97 138 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 HES7Q9BYE0 225 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 NOTCH3Q9UM47 2321 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 FAM87AP0C7U9 286 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 ZBTB34Q8NCN2 500 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 NUP35Q8NFH5 326 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 OR2Z1Q8NG97 314 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 SNRNP40Q96DI7 357 aaKnown RBP13.5□□□□□ -0.25
GPC1-201ENST00000264039 OSTCQ9NRP0 149 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 CREBBPQ92793 2442 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 FREM2Q5SZK8 3169 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 YPEL1O60688 119 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 AGFG2O95081 481 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 BVES-AS1Q5T3Y7 98 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 FADS6Q8N9I5 356 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 YPEL2Q96QA6 119 aa13.5□□□□□ -0.25
GPC1-201ENST00000264039 EML6Q6ZMW3 1958 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 TRAV9-1A0A075B6T8 112 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 CELA3BP08861 270 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 CD46P15529 392 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 CSN1S1P47710 185 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 PDPNQ86YL7 162 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 LOC102723996A0A087X1L8 192 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 TRGV10A0A0A0MS01 117 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 SP1P08047 785 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 C8orf88P0DMB2 117 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 MAGEA5P43359 124 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 CENPVQ7Z7K6 275 aaPredicted RBP13.49□□□□□ -0.25
GPC1-201ENST00000264039 ASCL2Q99929 193 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 C2CD4DB7Z1M9 353 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 SYS1-DBNDD2H3BUS1 97 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 MNX1P50219 401 aaPredicted RBP13.49□□□□□ -0.25
GPC1-201ENST00000264039 TMEM97Q5BJF2 176 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 ADTRPQ96IZ2 230 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 C18orf15Q96N68 181 aa13.49□□□□□ -0.25
GPC1-201ENST00000264039 ZNF716A6NP11 495 aa13.48□□□□□ -0.25
GPC1-201ENST00000264039 K7EP13 123 aa13.48□□□□□ -0.25
GPC1-201ENST00000264039 FOXF2Q12947 444 aa13.48□□□□□ -0.25
GPC1-201ENST00000264039 SMIM21Q3B7S5 101 aa13.48□□□□□ -0.25
GPC1-201ENST00000264039 ZNF497Q6ZNH5 498 aa13.48□□□□□ -0.25
GPC1-201ENST00000264039 GUCD1Q96NT3 240 aa13.48□□□□□ -0.25
GPC1-201ENST00000264039 OR51B2Q9Y5P1 312 aa13.48□□□□□ -0.25
GPC1-201ENST00000264039 MED13Q9UHV7 2174 aa13.48□□□□□ -0.25
GPC1-201ENST00000264039 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.48□□□□□ -0.25
GPC1-201ENST00000264039 SFTA2Q6UW10 78 aa13.48□□□□□ -0.25
GPC1-201ENST00000264039 HES4Q9HCC6 221 aa13.48□□□□□ -0.25
GPC1-201ENST00000264039 PRDM6Q9NQX0 595 aa13.48□□□□□ -0.25
GPC1-201ENST00000264039 TAX1BP3O14907 124 aa13.48□□□□□ -0.25
GPC1-201ENST00000264039 KLF7O75840 302 aaPredicted RBP13.48□□□□□ -0.25
GPC1-201ENST00000264039 ARL3P36405 182 aa13.48□□□□□ -0.25
GPC1-201ENST00000264039 APC2O95996 2303 aa13.48□□□□□ -0.25
GPC1-201ENST00000264039 IGHV5-10-1A0A0J9YXX1 117 aa13.47□□□□□ -0.25
GPC1-201ENST00000264039 APOHP02749 345 aaPredicted RBP13.47□□□□□ -0.25
GPC1-201ENST00000264039 HBBP68871 147 aa13.47□□□□□ -0.25
GPC1-201ENST00000264039 ERHP84090 104 aaKnown RBP13.47□□□□□ -0.25
GPC1-201ENST00000264039 PRNTQ86SH4 94 aa13.47□□□□□ -0.25
GPC1-201ENST00000264039 AP5S1Q9NUS5 200 aa13.47□□□□□ -0.25
GPC1-201ENST00000264039 A8MWL6 223 aa13.47□□□□□ -0.25
GPC1-201ENST00000264039 C10orf113Q5VZT2 155 aa13.47□□□□□ -0.25
GPC1-201ENST00000264039 LINC00596Q86U02 117 aa13.47□□□□□ -0.25
GPC1-201ENST00000264039 ST20Q9HBF5 79 aa13.47□□□□□ -0.25
GPC1-201ENST00000264039 EPOPA6NHQ4 379 aa13.47□□□□□ -0.25
GPC1-201ENST00000264039 PRSS1P07477 247 aa13.47□□□□□ -0.25
GPC1-201ENST00000264039 CTRLP40313 264 aa13.47□□□□□ -0.25
GPC1-201ENST00000264039 PRSS57Q6UWY2 283 aa13.47□□□□□ -0.25
GPC1-201ENST00000264039 ZNRF1Q8ND25 227 aa13.47□□□□□ -0.25
GPC1-201ENST00000264039 LOXL2Q9Y4K0 774 aa13.47□□□□□ -0.25
GPC1-201ENST00000264039 ABCA4P78363 2273 aa13.46□□□□□ -0.25
GPC1-201ENST00000264039 hADV38S2A0JD32 116 aa13.46□□□□□ -0.25
GPC1-201ENST00000264039 REG1AP05451 166 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms