RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 RTBDNQ9BSG5 229 aaPredicted RBP12.04□□□□□ -0.48
USE1-201ENST00000263897 HIPK2Q9H2X6 1198 aa12.04□□□□□ -0.48
USE1-201ENST00000263897 INS-IGF2F8WCM5 200 aa12.03□□□□□ -0.48
USE1-201ENST00000263897 ST8SIA3O43173 380 aa12.03□□□□□ -0.48
USE1-201ENST00000263897 MT-CO2P00403 227 aa12.03□□□□□ -0.48
USE1-201ENST00000263897 LYL1P12980 280 aa12.03□□□□□ -0.48
USE1-201ENST00000263897 SPINK9Q5DT21 86 aa12.03□□□□□ -0.48
USE1-201ENST00000263897 RRNAD1Q96FB5 475 aaKnown RBP12.03□□□□□ -0.48
USE1-201ENST00000263897 ZNF414Q96IQ9 312 aa12.03□□□□□ -0.48
USE1-201ENST00000263897 C20orf24Q9BUV8 137 aa12.03□□□□□ -0.48
USE1-201ENST00000263897 SLIRPQ9GZT3 109 aaKnown RBP12.03□□□□□ -0.48
USE1-201ENST00000263897 C6orf62Q9GZU0 229 aaPredicted RBP12.03□□□□□ -0.48
USE1-201ENST00000263897 TMEM222Q9H0R3 208 aa12.03□□□□□ -0.48
USE1-201ENST00000263897 GPR132Q9UNW8 380 aa12.03□□□□□ -0.48
USE1-201ENST00000263897 C14orf166Q9Y224 244 aaKnown RBP12.03□□□□□ -0.48
USE1-201ENST00000263897 KMT2CQ8NEZ4 4911 aaKnown RBP12.03□□□□□ -0.48
USE1-201ENST00000263897 IGHV3OR16-8A0A075B7F1 116 aa12.02□□□□□ -0.49
USE1-201ENST00000263897 TEX13DA0A0J9YY54 714 aaPredicted RBP12.02□□□□□ -0.49
USE1-201ENST00000263897 C15orf62A8K5M9 175 aa12.02□□□□□ -0.49
USE1-201ENST00000263897 H3BMQ9 156 aa12.02□□□□□ -0.49
USE1-201ENST00000263897 NUPL2O15504 423 aaKnown RBP12.02□□□□□ -0.49
USE1-201ENST00000263897 GSTZ1O43708 216 aaPredicted RBP12.02□□□□□ -0.49
USE1-201ENST00000263897 CDS2O95674 445 aa12.02□□□□□ -0.49
USE1-201ENST00000263897 IFNA17P01571 189 aa12.02□□□□□ -0.49
USE1-201ENST00000263897 TNFSF8P32971 234 aa12.02□□□□□ -0.49
USE1-201ENST00000263897 SNCAP37840 140 aa12.02□□□□□ -0.49
USE1-201ENST00000263897 ETV6P41212 452 aa12.02□□□□□ -0.49
USE1-201ENST00000263897 RELQ04864 619 aaPredicted RBP12.02□□□□□ -0.49
USE1-201ENST00000263897 OR4C16Q8NGL9 310 aa12.02□□□□□ -0.49
USE1-201ENST00000263897 GLYATL2Q8WU03 294 aa12.02□□□□□ -0.49
USE1-201ENST00000263897 ISOC1Q96CN7 298 aa12.02□□□□□ -0.49
USE1-201ENST00000263897 SOSTQ9BQB4 213 aa12.02□□□□□ -0.49
USE1-201ENST00000263897 RSL24D1Q9UHA3 163 aaKnown RBP12.02□□□□□ -0.49
USE1-201ENST00000263897 A0A0G2JRQ6 117 aa12.01□□□□□ -0.49
USE1-201ENST00000263897 ANKRD20A5PA0PJZ0 165 aa12.01□□□□□ -0.49
USE1-201ENST00000263897 TSPAN4O14817 238 aa12.01□□□□□ -0.49
USE1-201ENST00000263897 ZNF207O43670 478 aaKnown RBP12.01□□□□□ -0.49
USE1-201ENST00000263897 NOL3O60936 208 aaKnown RBP12.01□□□□□ -0.49
USE1-201ENST00000263897 IGHV3-48P01763 117 aa12.01□□□□□ -0.49
USE1-201ENST00000263897 PVRIGQ6DKI7 326 aa12.01□□□□□ -0.49
USE1-201ENST00000263897 LAMTOR1Q6IAA8 161 aa12.01□□□□□ -0.49
USE1-201ENST00000263897 Q6ZRM9 215 aa12.01□□□□□ -0.49
USE1-201ENST00000263897 SLC35G3Q8N808 338 aa12.01□□□□□ -0.49
USE1-201ENST00000263897 PINX1Q96BK5 328 aaKnown RBP12.01□□□□□ -0.49
USE1-201ENST00000263897 SPAG8Q99932 426 aaPredicted RBP12.01□□□□□ -0.49
USE1-201ENST00000263897 PRRT1Q99946 306 aa12.01□□□□□ -0.49
USE1-201ENST00000263897 PDCD10Q9BUL8 212 aa12.01□□□□□ -0.49
USE1-201ENST00000263897 NXF2Q9GZY0 626 aaKnown RBP12.01□□□□□ -0.49
USE1-201ENST00000263897 NAA60Q9H7X0 242 aa12.01□□□□□ -0.49
USE1-201ENST00000263897 SMPXQ9UHP9 88 aa12.01□□□□□ -0.49
USE1-201ENST00000263897 FABP12A6NFH5 140 aa12□□□□□ -0.49
USE1-201ENST00000263897 OR5AC1P0C628 307 aa12□□□□□ -0.49
USE1-201ENST00000263897 SUB1P53999 127 aaKnown RBP eCLIP12□□□□□ -0.49
USE1-201ENST00000263897 DHODHQ02127 395 aa12□□□□□ -0.49
USE1-201ENST00000263897 FAM219AQ8IW50 185 aa12□□□□□ -0.49
USE1-201ENST00000263897 SELENOHQ8IZQ5 122 aaKnown RBP12□□□□□ -0.49
USE1-201ENST00000263897 OR51S1Q8NGJ8 323 aa12□□□□□ -0.49
USE1-201ENST00000263897 MCFD2Q8NI22 146 aa12□□□□□ -0.49
USE1-201ENST00000263897 RNASE11Q8TAA1 199 aaKnown RBP12□□□□□ -0.49
USE1-201ENST00000263897 OR10C1Q96KK4 312 aa12□□□□□ -0.49
USE1-201ENST00000263897 RETNQ9HD89 108 aa12□□□□□ -0.49
USE1-201ENST00000263897 CTNNBIP1Q9NSA3 81 aaPredicted RBP12□□□□□ -0.49
USE1-201ENST00000263897 GNG7O60262 68 aa11.99□□□□□ -0.49
USE1-201ENST00000263897 YIF1AO95070 293 aa11.99□□□□□ -0.49
USE1-201ENST00000263897 RNASE2P10153 161 aaKnown RBP11.99□□□□□ -0.49
USE1-201ENST00000263897 NPBWR1P48145 328 aa11.99□□□□□ -0.49
USE1-201ENST00000263897 AARDQ4LEZ3 155 aa11.99□□□□□ -0.49
USE1-201ENST00000263897 DUSP18Q8NEJ0 188 aa11.99□□□□□ -0.49
USE1-201ENST00000263897 LHFPL5Q8TAF8 219 aa11.99□□□□□ -0.49
USE1-201ENST00000263897 RBPMSQ93062 196 aaKnown RBP11.99□□□□□ -0.49
USE1-201ENST00000263897 IGHV7-4-1A0A0J9YVY3 117 aa11.98□□□□□ -0.49
USE1-201ENST00000263897 CRYM-AS1A6NIL9 109 aa11.98□□□□□ -0.49
USE1-201ENST00000263897 SPCS3P61009 180 aa11.98□□□□□ -0.49
USE1-201ENST00000263897 TMEM116Q8NCL8 245 aa11.98□□□□□ -0.49
USE1-201ENST00000263897 OR52E5Q8NH55 327 aa11.98□□□□□ -0.49
USE1-201ENST00000263897 FAM110AQ9BQ89 295 aa11.98□□□□□ -0.49
USE1-201ENST00000263897 RHPN1-AS1Q9BWJ2 59 aa11.98□□□□□ -0.49
USE1-201ENST00000263897 ENY2Q9NPA8 101 aa11.98□□□□□ -0.49
USE1-201ENST00000263897 SCP2D1Q9UJQ7 156 aa11.98□□□□□ -0.49
USE1-201ENST00000263897 LOC102724200A0A096LPH7 203 aaPredicted RBP11.97□□□□□ -0.49
USE1-201ENST00000263897 TRAV14DV4A0A0A6YYC5 116 aa11.97□□□□□ -0.49
USE1-201ENST00000263897 CORTO00230 105 aa11.97□□□□□ -0.49
USE1-201ENST00000263897 CHEK1O14757 476 aa11.97□□□□□ -0.49
USE1-201ENST00000263897 TMEM50AO95807 157 aa11.97□□□□□ -0.49
USE1-201ENST00000263897 HOXA1P49639 335 aaPredicted RBP11.97□□□□□ -0.49
USE1-201ENST00000263897 ZFAND6Q6FIF0 208 aa11.97□□□□□ -0.49
USE1-201ENST00000263897 GPR146Q96CH1 333 aa11.97□□□□□ -0.49
USE1-201ENST00000263897 SCGB3A2Q96PL1 93 aa11.97□□□□□ -0.49
USE1-201ENST00000263897 RNF2Q99496 336 aa11.97□□□□□ -0.49
USE1-201ENST00000263897 GGTLC1Q9BX51 225 aa11.97□□□□□ -0.49
USE1-201ENST00000263897 KCNIP3Q9Y2W7 256 aa11.97□□□□□ -0.49
USE1-201ENST00000263897 TMEM56-RWDD3S4R434 201 aa11.97□□□□□ -0.49
USE1-201ENST00000263897 TENM2Q9NT68 2774 aa11.97□□□□□ -0.49
USE1-201ENST00000263897 DNAH7Q8WXX0 4024 aa11.97□□□□□ -0.49
USE1-201ENST00000263897 IGHV3-49A0A0A0MS15 119 aa11.96□□□□□ -0.49
USE1-201ENST00000263897 OR4C46A6NHA9 309 aa11.96□□□□□ -0.49
USE1-201ENST00000263897 MLANAQ16655 118 aa11.96□□□□□ -0.49
USE1-201ENST00000263897 BSXQ3C1V8 233 aa11.96□□□□□ -0.49
USE1-201ENST00000263897 TMEM268Q5VZI3 342 aa11.96□□□□□ -0.49
USE1-201ENST00000263897 TOMM20LQ6UXN7 152 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms