RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 UPK1BO75841 260 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 DFFBO76075 338 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 S100A1P23297 94 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 MFAP4P55083 255 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 DEFA1P59665 94 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 DEFA3P59666 94 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 HERV-K104P61576 105 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 SPCS2Q15005 226 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 TMEM41BQ5BJD5 291 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 FAM90A2PQ658T7 463 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 TCF24Q7RTU0 167 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 STHQ8IWL8 128 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 Q8NAQ8 132 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 OR1P1Q8NH06 330 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 GIMAP1Q8WWP7 306 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 SLC25A46Q96AG3 418 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 MISP3Q96FF7 219 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 TXN2Q99757 166 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 GINS3Q9BRX5 216 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 SLIRPQ9GZT3 109 aaKnown RBP6.53□□□□□ -1.36
LCN1-201ENST00000263598 PRNDQ9UKY0 176 aa6.53□□□□□ -1.36
LCN1-201ENST00000263598 IGHV4-4A0A075B6R2 117 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 TRAV18A0A075B6X5 111 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 TRAV2A0A0B4J234 112 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 ST8SIA3O43173 380 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 GNG7O60262 68 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 KRASP01116 189 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 RLN1P04808 185 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 MIFP14174 115 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 F2RP25116 425 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 HLA-DMBP28068 263 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 GNRHRP30968 328 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 FGF9P31371 208 aaPredicted RBP6.52□□□□□ -1.37
LCN1-201ENST00000263598 S100A5P33763 92 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 CBX5P45973 191 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 SCAND1P57086 179 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 DEFB131AP59861 70 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 RPL11P62913 178 aaKnown RBP6.52□□□□□ -1.37
LCN1-201ENST00000263598 LEMD1Q68G75 181 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 SFXN4Q6P4A7 337 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 CADM3Q8N126 398 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 DUSP18Q8NEJ0 188 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 OR5AP2Q8NGF4 316 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 LGALS14Q8TCE9 139 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 MS4A6AQ9H2W1 248 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 TXNL4BQ9NX01 149 aaKnown RBP6.52□□□□□ -1.37
LCN1-201ENST00000263598 NSG2Q9Y328 171 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 VPS13DQ5THJ4 4388 aa6.52□□□□□ -1.37
LCN1-201ENST00000263598 IGHV3OR16-13A0A075B7E8 117 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 A0A0A6YYH2 397 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 IGHV3-74A0A0B4J1X5 117 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 IGHV4-28A0A0C4DH34 117 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 A6NJ64 397 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 PGLYRP1O75594 196 aaPredicted RBP6.51□□□□□ -1.37
LCN1-201ENST00000263598 APOA1P02647 267 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 FCER2P06734 321 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 G6PCP35575 357 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 LPAR6P43657 344 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 PVRIGQ6DKI7 326 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 MORN3Q6PF18 240 aaPredicted RBP6.51□□□□□ -1.37
LCN1-201ENST00000263598 Q6ZTC4 211 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 CMTM1Q8IZ96 169 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 MCFD2Q8NI22 146 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 FCAMRQ8WWV6 532 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 RNF126Q9BV68 326 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 TMEM231Q9H6L2 316 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 DIABLOQ9NR28 239 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 TMEM14BQ9NUH8 114 aa6.51□□□□□ -1.37
LCN1-201ENST00000263598 A0A1B0GVY2 172 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 PRSS29PA6NIE9 313 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 BOLA2-SMG1P6H3BVE0 249 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 I3L2K1 104 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 RGS13O14921 159 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 MT-CO2P00403 227 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 RBMY1A1P0DJD3 496 aaKnown RBP6.5□□□□□ -1.37
LCN1-201ENST00000263598 RBMY1CP0DJD4 496 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 P0DMU3 169 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 FAM231AP0DMU4 169 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 FAM231CP0DMU5 169 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 SPP1P10451 314 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 PSMB9P28065 219 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 EIF2B2P49770 351 aaKnown RBP6.5□□□□□ -1.37
LCN1-201ENST00000263598 RBMY1FQ15415 496 aaKnown RBP6.5□□□□□ -1.37
LCN1-201ENST00000263598 DHRS11Q6UWP2 260 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 LYSMD2Q8IV50 215 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 ST8SIA2Q92186 375 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 PINX1Q96BK5 328 aaKnown RBP6.5□□□□□ -1.37
LCN1-201ENST00000263598 ZNF414Q96IQ9 312 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 VSIRQ9H7M9 311 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 AUNIPQ9H7T9 357 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 IFT46Q9NQC8 304 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 EHFQ9NZC4 300 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 RABAC1Q9UI14 185 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 SSR3Q9UNL2 185 aa6.5□□□□□ -1.37
LCN1-201ENST00000263598 IGHV3-66A0A0C4DH42 116 aa6.49□□□□□ -1.37
LCN1-201ENST00000263598 A0A1W2PS18 150 aa6.49□□□□□ -1.37
LCN1-201ENST00000263598 DBX1A6NMT0 343 aa6.49□□□□□ -1.37
LCN1-201ENST00000263598 ZNF705EA8MWA4 302 aaPredicted RBP6.49□□□□□ -1.37
LCN1-201ENST00000263598 IGHV3-48P01763 117 aa6.49□□□□□ -1.37
LCN1-201ENST00000263598 S100GP29377 79 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms