RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 TEX22C9J3V5 150 aa12.53□□□□□ -0.4
FOXRED1-201ENST00000263578 FCN1O00602 326 aa12.53□□□□□ -0.4
FOXRED1-201ENST00000263578 EIF3GO75821 320 aaKnown RBP eCLIP12.53□□□□□ -0.4
FOXRED1-201ENST00000263578 AREGP15514 252 aa12.53□□□□□ -0.4
FOXRED1-201ENST00000263578 SAA4P35542 130 aa12.53□□□□□ -0.4
FOXRED1-201ENST00000263578 PAX8Q06710 450 aa12.53□□□□□ -0.4
FOXRED1-201ENST00000263578 ICAM4Q14773 271 aa12.53□□□□□ -0.4
FOXRED1-201ENST00000263578 GCSAMLQ5JQS6 135 aa12.53□□□□□ -0.4
FOXRED1-201ENST00000263578 LINC00469Q8N7U9 141 aa12.53□□□□□ -0.4
FOXRED1-201ENST00000263578 RAB24Q969Q5 203 aa12.53□□□□□ -0.4
FOXRED1-201ENST00000263578 NKX6-2Q9C056 277 aaPredicted RBP12.53□□□□□ -0.4
FOXRED1-201ENST00000263578 LOC102723971A0A1B0GUV8 181 aa12.52□□□□□ -0.4
FOXRED1-201ENST00000263578 BCL2P10415 239 aa12.52□□□□□ -0.4
FOXRED1-201ENST00000263578 RPL29P47914 159 aaKnown RBP12.52□□□□□ -0.4
FOXRED1-201ENST00000263578 FBLN7Q53RD9 439 aa12.52□□□□□ -0.4
FOXRED1-201ENST00000263578 KHDC3LQ587J8 217 aa12.52□□□□□ -0.4
FOXRED1-201ENST00000263578 STPG3Q8N7X2 389 aa12.52□□□□□ -0.4
FOXRED1-201ENST00000263578 ZFP92A6NM28 416 aa12.52□□□□□ -0.41
FOXRED1-201ENST00000263578 NPFFO15130 113 aa12.52□□□□□ -0.41
FOXRED1-201ENST00000263578 HMGB3O15347 200 aaKnown RBP12.52□□□□□ -0.41
FOXRED1-201ENST00000263578 IFNA1P01562 189 aa12.52□□□□□ -0.41
FOXRED1-201ENST00000263578 HSPB1P04792 205 aaKnown RBP12.52□□□□□ -0.41
FOXRED1-201ENST00000263578 DEFA4P12838 97 aa12.52□□□□□ -0.41
FOXRED1-201ENST00000263578 EBI3Q14213 229 aa12.52□□□□□ -0.41
FOXRED1-201ENST00000263578 MLANAQ16655 118 aa12.52□□□□□ -0.41
FOXRED1-201ENST00000263578 Q8N6K4 173 aa12.52□□□□□ -0.41
FOXRED1-201ENST00000263578 AJUBAQ96IF1 538 aa12.52□□□□□ -0.41
FOXRED1-201ENST00000263578 SRSF8Q9BRL6 282 aaKnown RBP12.52□□□□□ -0.41
FOXRED1-201ENST00000263578 IGKV1OR2-108A0A075B7D4 117 aa12.51□□□□□ -0.41
FOXRED1-201ENST00000263578 SNAPINO95295 136 aa12.51□□□□□ -0.41
FOXRED1-201ENST00000263578 APELAP0DMC3 54 aa12.51□□□□□ -0.41
FOXRED1-201ENST00000263578 PRR20EP86478 221 aa12.51□□□□□ -0.41
FOXRED1-201ENST00000263578 PRR20CP86479 221 aa12.51□□□□□ -0.41
FOXRED1-201ENST00000263578 PRR20DP86480 221 aa12.51□□□□□ -0.41
FOXRED1-201ENST00000263578 PRR20BP86481 221 aa12.51□□□□□ -0.41
FOXRED1-201ENST00000263578 PRR20AP86496 221 aa12.51□□□□□ -0.41
FOXRED1-201ENST00000263578 C5orf64Q2M2E5 130 aa12.51□□□□□ -0.41
FOXRED1-201ENST00000263578 PVRIGQ6DKI7 326 aa12.51□□□□□ -0.41
FOXRED1-201ENST00000263578 RXFP4Q8TDU9 374 aa12.51□□□□□ -0.41
FOXRED1-201ENST00000263578 FNDC4Q9H6D8 234 aaPredicted RBP12.51□□□□□ -0.41
FOXRED1-201ENST00000263578 CENPVL3A0A0U1RRI6 287 aa12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 A0A1W2PPV4 95 aa12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 CNIH1O95406 144 aa12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 PMS2P11Q13670 270 aa12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 OR1P1Q8NH06 330 aa12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 ACY3Q96HD9 319 aa12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 SLC45A2Q9UMX9 530 aa12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 KMT2BQ9UMN6 2715 aaPredicted RBP12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 SRP19P09132 144 aaKnown RBP12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 SLC25A16P16260 332 aa12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 TMEM11P17152 192 aa12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 ATF4P18848 351 aaPredicted RBP12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 OR10J1P30954 320 aa12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 BTN1A1Q13410 526 aa12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 CLEC12BQ2HXU8 276 aa12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 OR2T6Q8NHC8 308 aa12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 MISP3Q96FF7 219 aa12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 F11RQ9Y624 299 aaKnown RBP12.5□□□□□ -0.41
FOXRED1-201ENST00000263578 CORTO00230 105 aa12.49□□□□□ -0.41
FOXRED1-201ENST00000263578 TSPAN4O14817 238 aa12.49□□□□□ -0.41
FOXRED1-201ENST00000263578 MSMBP08118 114 aa12.49□□□□□ -0.41
FOXRED1-201ENST00000263578 FAM106CPP0CH98 169 aa12.49□□□□□ -0.41
FOXRED1-201ENST00000263578 BRS3P32247 399 aa12.49□□□□□ -0.41
FOXRED1-201ENST00000263578 MFAP2P55001 183 aa12.49□□□□□ -0.41
FOXRED1-201ENST00000263578 ETFRF1Q6IPR1 90 aa12.49□□□□□ -0.41
FOXRED1-201ENST00000263578 PIP4P2Q8N4L2 257 aa12.49□□□□□ -0.41
FOXRED1-201ENST00000263578 ABHD5Q8WTS1 349 aa12.49□□□□□ -0.41
FOXRED1-201ENST00000263578 NCBP2LA6PVI3 153 aaKnown RBP12.49□□□□□ -0.41
FOXRED1-201ENST00000263578 LINC00869P0C866 280 aa12.49□□□□□ -0.41
FOXRED1-201ENST00000263578 COL8A1P27658 744 aa12.49□□□□□ -0.41
FOXRED1-201ENST00000263578 SOHLH1Q5JUK2 328 aa12.49□□□□□ -0.41
FOXRED1-201ENST00000263578 RBMS3Q6XE24 437 aaKnown RBP12.49□□□□□ -0.41
FOXRED1-201ENST00000263578 C19orf35Q6ZS72 473 aa12.49□□□□□ -0.41
FOXRED1-201ENST00000263578 VAX2Q9UIW0 290 aa12.49□□□□□ -0.41
FOXRED1-201ENST00000263578 NPBWR1P48145 328 aa12.48□□□□□ -0.41
FOXRED1-201ENST00000263578 FXYD3Q14802 87 aa12.48□□□□□ -0.41
FOXRED1-201ENST00000263578 TMEM249Q2WGJ8 235 aa12.48□□□□□ -0.41
FOXRED1-201ENST00000263578 TMPRSS5Q9H3S3 457 aa12.48□□□□□ -0.41
FOXRED1-201ENST00000263578 MANBALQ9NQG1 85 aa12.48□□□□□ -0.41
FOXRED1-201ENST00000263578 VPS13CQ709C8 3753 aa12.48□□□□□ -0.41
FOXRED1-201ENST00000263578 FBN2P35556 2912 aa12.48□□□□□ -0.41
FOXRED1-201ENST00000263578 ANKRD17O75179 2603 aaKnown RBP12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 TRAV40A0A0B4J280 105 aa12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 IGHV1-69DA0A0B4J2H0 117 aa12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 IGHV1-69P01742 117 aa12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 TAGLN2P37802 199 aaKnown RBP12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 RHOBP62745 196 aa12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 CYB561D1Q8N8Q1 229 aa12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 CLRN3Q8NCR9 226 aa12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 NPIPB3Q92617 1050 aa12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 IGHV3-48P01763 117 aa12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 CRYGCP07315 174 aa12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 FBP1P09467 338 aa12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 RND2P52198 227 aa12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 CEBPGP53567 150 aa12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 FAM120AOSQ5T036 256 aa12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 CYP2G1PQ6ZSU1 146 aa12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 SLC35E3Q7Z769 313 aa12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 THAP8Q8NA92 274 aa12.47□□□□□ -0.41
FOXRED1-201ENST00000263578 C22orf15Q8WYQ4 148 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms