RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 CD24P25063 80 aa7.45□□□□□ -1.22
MSH4-201ENST00000263187 GUSBP1Q15486 140 aa7.45□□□□□ -1.22
MSH4-201ENST00000263187 MBNL2Q5VZF2 373 aaKnown RBP7.45□□□□□ -1.22
MSH4-201ENST00000263187 TCTEX1D1Q8N7M0 179 aa7.45□□□□□ -1.22
MSH4-201ENST00000263187 DDB2Q92466 427 aa7.45□□□□□ -1.22
MSH4-201ENST00000263187 ZNF503Q96F45 646 aa7.45□□□□□ -1.22
MSH4-201ENST00000263187 TEX50A0A1B0GTY4 177 aa7.45□□□□□ -1.22
MSH4-201ENST00000263187 IGLV1-44P01699 117 aa7.45□□□□□ -1.22
MSH4-201ENST00000263187 SAA1P0DJI8 122 aaPredicted RBP7.45□□□□□ -1.22
MSH4-201ENST00000263187 GPR6P46095 362 aaPredicted RBP7.45□□□□□ -1.22
MSH4-201ENST00000263187 NUTF2P61970 127 aaKnown RBP7.45□□□□□ -1.22
MSH4-201ENST00000263187 BLNKQ8WV28 456 aa7.45□□□□□ -1.22
MSH4-201ENST00000263187 V9GYV3 84 aa7.45□□□□□ -1.22
MSH4-201ENST00000263187 DYSFO75923 2080 aa7.45□□□□□ -1.22
MSH4-201ENST00000263187 IRF2P14316 349 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 SRIP30626 198 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 AMTP48728 403 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 TPPP2P59282 170 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 SSTP61278 116 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 GNG5P63218 68 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 OR5AU1Q8NGC0 362 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 SSBP4Q9BWG4 385 aaPredicted RBP7.44□□□□□ -1.22
MSH4-201ENST00000263187 MRPL20Q9BYC9 149 aaKnown RBP7.44□□□□□ -1.22
MSH4-201ENST00000263187 TMEM14BQ9NUH8 114 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 FBXL7Q9UJT9 491 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 M0R143 59 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 F2RL2O00254 374 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 ZNF253O75346 499 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 CD99P14209 185 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 MAJINQ3KP22 176 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 C1orf194Q5T5A4 169 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 SIGLECL1Q8N7X8 197 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 ZNF355PQ9NSJ1 428 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 ZNF891A8MT65 544 aaPredicted RBP7.44□□□□□ -1.22
MSH4-201ENST00000263187 MT-CO2P00403 227 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 IGHV1-46P01743 117 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 OR5G3P0C626 314 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 FTH1P19P0C7X4 201 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 CAMPP49913 170 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 UBE2L3P68036 154 aaKnown RBP7.44□□□□□ -1.22
MSH4-201ENST00000263187 ZNF124Q15973 351 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 TIGITQ495A1 244 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 HCP5Q6MZN7 132 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 TRAT1Q6PIZ9 186 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 WFDC8Q8IUA0 241 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 CCL17Q92583 94 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 HARBI1Q96MB7 349 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 ASCL2Q99929 193 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 RNF7Q9UBF6 113 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 TIMM8BQ9Y5J9 83 aaPredicted RBP7.44□□□□□ -1.22
MSH4-201ENST00000263187 WNK2Q9Y3S1 2297 aa7.44□□□□□ -1.22
MSH4-201ENST00000263187 ENSAO43768 121 aaKnown RBP7.43□□□□□ -1.22
MSH4-201ENST00000263187 PAX1P15863 534 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 RANP62826 216 aaKnown RBP7.43□□□□□ -1.22
MSH4-201ENST00000263187 PRR20EP86478 221 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 PRR20CP86479 221 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 PRR20DP86480 221 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 PRR20BP86481 221 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 PRR20AP86496 221 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 RUSC1-AS1Q66K80 236 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 LEMD1Q68G75 181 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 LCN12Q6JVE5 192 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 ASCL5Q7RTU5 278 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 OR52E5Q8NH55 327 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 IGFBPL1Q8WX77 278 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 GAFA1Q96PS6 74 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 VAMP8Q9BV40 100 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 SLC45A2Q9UMX9 530 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 TBL2Q9Y4P3 447 aaKnown RBP7.43□□□□□ -1.22
MSH4-201ENST00000263187 ATRXP46100 2492 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 SPTBN1Q01082 2364 aaKnown RBP7.43□□□□□ -1.22
MSH4-201ENST00000263187 SPTAN1Q13813 2472 aaKnown RBP7.43□□□□□ -1.22
MSH4-201ENST00000263187 A0A1W2PN81 502 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 MOSP00540 346 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 ORM2P19652 201 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 YPEL3P61236 119 aaPredicted RBP7.43□□□□□ -1.22
MSH4-201ENST00000263187 DNLZQ5SXM8 178 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 IBA57Q5T440 356 aaKnown RBP7.43□□□□□ -1.22
MSH4-201ENST00000263187 TPTE2P1Q5T6R2 138 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 NPIPB3Q92617 1050 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 RITA1Q96K30 269 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 COMMD5Q9GZQ3 224 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 GSX1Q9H4S2 264 aaPredicted RBP7.43□□□□□ -1.22
MSH4-201ENST00000263187 IL19Q9UHD0 177 aa7.43□□□□□ -1.22
MSH4-201ENST00000263187 RAB7AP51149 207 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 STUMQ69YW2 141 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 TPSG1Q9NRR2 321 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 MRPL36Q9P0J6 103 aaKnown RBP7.42□□□□□ -1.22
MSH4-201ENST00000263187 FOXA2Q9Y261 457 aaPredicted RBP7.42□□□□□ -1.22
MSH4-201ENST00000263187 MALRD1Q5VYJ5 2156 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 CORTO00230 105 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 TMPRSS3P57727 454 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 RTL8BQ17RB0 113 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 TECRQ9NZ01 308 aaKnown RBP7.42□□□□□ -1.22
MSH4-201ENST00000263187 FAM215AQ9Y5M1 114 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 DIRC3C9JPN6 131 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 M0QZ24 198 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 UPK2O00526 184 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 LHBP01229 141 aa7.42□□□□□ -1.22
MSH4-201ENST00000263187 CGB3P0DN86 165 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 194.7 ms