RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 MEGF9Q9H1U4 602 aa22.01■■□□□ 1.11
SMARCD3-201ENST00000262188 A0A0G2JRQ6 117 aa22■■□□□ 1.11
SMARCD3-201ENST00000262188 TMEM56Q96MV1 263 aa22■■□□□ 1.11
SMARCD3-201ENST00000262188 TNFRSF19Q9NS68 423 aa22■■□□□ 1.11
SMARCD3-201ENST00000262188 TMEM56-RWDD3S4R434 201 aa22■■□□□ 1.11
SMARCD3-201ENST00000262188 AGPAT2O15120 278 aa21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 IGKV1-5P01602 117 aa21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 RPS16P62249 146 aaKnown RBP21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 ARSJQ5FYB0 599 aaPredicted RBP21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 COA6Q5JTJ3 125 aaKnown RBP21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 GFI1BQ5VTD9 330 aa21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 DMRTA1Q5VZB9 504 aa21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 PDPNQ86YL7 162 aa21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 FLYWCH2Q96CP2 140 aaKnown RBP21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 CD1BP29016 333 aa21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 MC5RP33032 325 aa21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 KIR2DS2P43631 304 aa21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 IQCJQ1A5X6 159 aa21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 C9orf139Q6ZV77 190 aa21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 LGI3Q8N145 548 aa21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 EAF1Q96JC9 268 aaPredicted RBP21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 HARBI1Q96MB7 349 aa21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 C20orf24Q9BUV8 137 aa21.99■■□□□ 1.11
SMARCD3-201ENST00000262188 TRGC1P0CF51 173 aa21.98■■□□□ 1.11
SMARCD3-201ENST00000262188 LY6EQ16553 131 aa21.98■■□□□ 1.11
SMARCD3-201ENST00000262188 TMEM219Q86XT9 240 aa21.98■■□□□ 1.11
SMARCD3-201ENST00000262188 CD300LFQ8TDQ1 290 aa21.98■■□□□ 1.11
SMARCD3-201ENST00000262188 STRAPQ9Y3F4 350 aaKnown RBP21.98■■□□□ 1.11
SMARCD3-201ENST00000262188 C5orf51A6NDU8 294 aa21.98■■□□□ 1.11
SMARCD3-201ENST00000262188 H3BUX3 64 aa21.98■■□□□ 1.11
SMARCD3-201ENST00000262188 RBFOX2O43251 390 aaKnown RBP eCLIP21.98■■□□□ 1.11
SMARCD3-201ENST00000262188 HPRT1P00492 218 aa21.98■■□□□ 1.11
SMARCD3-201ENST00000262188 Q8WTZ3 238 aa21.98■■□□□ 1.11
SMARCD3-201ENST00000262188 FAM90A9PA6NNJ1 464 aa21.97■■□□□ 1.11
SMARCD3-201ENST00000262188 IGHV4-59P01825 116 aa21.97■■□□□ 1.11
SMARCD3-201ENST00000262188 HNF1AP20823 631 aa21.97■■□□□ 1.11
SMARCD3-201ENST00000262188 TMEM177Q53S58 311 aa21.97■■□□□ 1.11
SMARCD3-201ENST00000262188 C1orf194Q5T5A4 169 aa21.97■■□□□ 1.11
SMARCD3-201ENST00000262188 SMIM15Q7Z3B0 74 aa21.97■■□□□ 1.11
SMARCD3-201ENST00000262188 FAM219AQ8IW50 185 aa21.97■■□□□ 1.11
SMARCD3-201ENST00000262188 VAX2Q9UIW0 290 aa21.97■■□□□ 1.11
SMARCD3-201ENST00000262188 KIR2DL5BA0A0G2JN68 375 aa21.96■■□□□ 1.11
SMARCD3-201ENST00000262188 KIR2DL5BA0A0G2JPC4 375 aa21.96■■□□□ 1.11
SMARCD3-201ENST00000262188 B4DEV8 164 aa21.96■■□□□ 1.11
SMARCD3-201ENST00000262188 BRS3P32247 399 aa21.96■■□□□ 1.11
SMARCD3-201ENST00000262188 LRRC75BQ2VPJ9 315 aa21.96■■□□□ 1.11
SMARCD3-201ENST00000262188 SOHLH1Q5JUK2 328 aa21.96■■□□□ 1.11
SMARCD3-201ENST00000262188 KIR2DL5AQ8N109 375 aa21.96■■□□□ 1.11
SMARCD3-201ENST00000262188 TCTEX1D1Q8N7M0 179 aa21.96■■□□□ 1.11
SMARCD3-201ENST00000262188 OR4C13Q8NGP0 309 aa21.96■■□□□ 1.11
SMARCD3-201ENST00000262188 EIF5A2Q9GZV4 153 aaKnown RBP21.96■■□□□ 1.11
SMARCD3-201ENST00000262188 RAB18Q9NP72 206 aa21.96■■□□□ 1.11
SMARCD3-201ENST00000262188 IGLV2-23P01705 113 aa21.96■■□□□ 1.11
SMARCD3-201ENST00000262188 SIGLECL1Q8N7X8 197 aa21.96■■□□□ 1.11
SMARCD3-201ENST00000262188 TPSG1Q9NRR2 321 aa21.96■■□□□ 1.11
SMARCD3-201ENST00000262188 K7EP13 123 aa21.95■■□□□ 1.1
SMARCD3-201ENST00000262188 MOSP00540 346 aa21.95■■□□□ 1.1
SMARCD3-201ENST00000262188 LRTM2Q8N967 370 aa21.95■■□□□ 1.1
SMARCD3-201ENST00000262188 ZDHHC16Q969W1 377 aa21.95■■□□□ 1.1
SMARCD3-201ENST00000262188 FAM210BQ96KR6 192 aa21.95■■□□□ 1.1
SMARCD3-201ENST00000262188 DUX5Q96PT3 197 aa21.95■■□□□ 1.1
SMARCD3-201ENST00000262188 TMEM160Q9NX00 188 aa21.95■■□□□ 1.1
SMARCD3-201ENST00000262188 NSG2Q9Y328 171 aa21.95■■□□□ 1.1
SMARCD3-201ENST00000262188 MMP24Q9Y5R2 645 aa21.95■■□□□ 1.1
SMARCD3-201ENST00000262188 TRAV3A0A0B4J244 114 aa21.94■■□□□ 1.1
SMARCD3-201ENST00000262188 PRSS47A8MTI9 375 aa21.94■■□□□ 1.1
SMARCD3-201ENST00000262188 TRGC2P03986 189 aa21.94■■□□□ 1.1
SMARCD3-201ENST00000262188 FOXRED2Q8IWF2 684 aa21.94■■□□□ 1.1
SMARCD3-201ENST00000262188 SLC25A17O43808 307 aa21.94■■□□□ 1.1
SMARCD3-201ENST00000262188 SAA1P0DJI8 122 aaPredicted RBP21.94■■□□□ 1.1
SMARCD3-201ENST00000262188 Q6ZRM9 215 aa21.94■■□□□ 1.1
SMARCD3-201ENST00000262188 OR2T10Q8NGZ9 312 aa21.94■■□□□ 1.1
SMARCD3-201ENST00000262188 FN1P02751 2386 aaKnown RBP21.93■■□□□ 1.1
SMARCD3-201ENST00000262188 PPP5D1E7EU14 171 aa21.93■■□□□ 1.1
SMARCD3-201ENST00000262188 H0YIZ8 118 aa21.93■■□□□ 1.1
SMARCD3-201ENST00000262188 SEC11BP0C7V7 166 aa21.93■■□□□ 1.1
SMARCD3-201ENST00000262188 PDZD11Q5EBL8 140 aa21.93■■□□□ 1.1
SMARCD3-201ENST00000262188 ARV1Q9H2C2 271 aa21.93■■□□□ 1.1
SMARCD3-201ENST00000262188 TMEM242Q9NWH2 141 aa21.93■■□□□ 1.1
SMARCD3-201ENST00000262188 ZFP30Q9Y2G7 519 aa21.93■■□□□ 1.1
SMARCD3-201ENST00000262188 NSD1Q96L73 2696 aaPredicted RBP21.93■■□□□ 1.1
SMARCD3-201ENST00000262188 C13orf42A0A1B0GVH6 325 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 CXCL1P09341 107 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 FAM106CPP0CH98 169 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 SRPXP78539 464 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 MMDQ15546 238 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 OR4A47Q6IF82 309 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 TEX29Q8N6K0 151 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 Q8N6K4 173 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 OSR1Q8TAX0 266 aaPredicted RBP21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 ABHD5Q8WTS1 349 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 GPR146Q96CH1 333 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 OR10C1Q96KK4 312 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 TMEM140Q9NV12 185 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 SOX15O60248 233 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 NXPH3O95157 252 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 AMBPP02760 352 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 OR9G9P0C7N8 305 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 SRD5A1P18405 259 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 EBI3Q14213 229 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms