RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 CEACAM4O75871 244 aa11.85□□□□□ -0.51
SFSWAP-201ENST00000261674 KLF3P57682 345 aaPredicted RBP11.85□□□□□ -0.51
SFSWAP-201ENST00000261674 TRAV5A0A0B4J249 113 aa11.85□□□□□ -0.51
SFSWAP-201ENST00000261674 ZNF253O75346 499 aa11.85□□□□□ -0.51
SFSWAP-201ENST00000261674 PLAUP00749 431 aa11.85□□□□□ -0.51
SFSWAP-201ENST00000261674 IGFL2Q6UWQ7 119 aa11.85□□□□□ -0.51
SFSWAP-201ENST00000261674 FAM19A2Q8N3H0 131 aa11.85□□□□□ -0.51
SFSWAP-201ENST00000261674 SLC35D1Q9NTN3 355 aa11.85□□□□□ -0.51
SFSWAP-201ENST00000261674 LSM4Q9Y4Z0 139 aaKnown RBP11.85□□□□□ -0.51
SFSWAP-201ENST00000261674 PRSS46E5RG02 174 aa11.84□□□□□ -0.51
SFSWAP-201ENST00000261674 IDI2-AS1Q9NZ38 188 aa11.84□□□□□ -0.51
SFSWAP-201ENST00000261674 RPH3ALQ9UNE2 315 aa11.84□□□□□ -0.51
SFSWAP-201ENST00000261674 UTP20O75691 2785 aaKnown RBP11.84□□□□□ -0.51
SFSWAP-201ENST00000261674 CCL8P80075 99 aa11.84□□□□□ -0.51
SFSWAP-201ENST00000261674 MZT1Q08AG7 82 aa11.84□□□□□ -0.51
SFSWAP-201ENST00000261674 FAM90A1Q86YD7 464 aa11.84□□□□□ -0.51
SFSWAP-201ENST00000261674 STARD4Q96DR4 205 aa11.84□□□□□ -0.51
SFSWAP-201ENST00000261674 GNB4Q9HAV0 340 aa11.84□□□□□ -0.51
SFSWAP-201ENST00000261674 FAM208BQ5VWN6 2430 aa11.84□□□□□ -0.51
SFSWAP-201ENST00000261674 SRRM4A7MD48 611 aaKnown RBP11.84□□□□□ -0.51
SFSWAP-201ENST00000261674 APELAP0DMC3 54 aa11.84□□□□□ -0.51
SFSWAP-201ENST00000261674 PAX1P15863 534 aa11.84□□□□□ -0.51
SFSWAP-201ENST00000261674 ATOH7Q8N100 152 aa11.84□□□□□ -0.51
SFSWAP-201ENST00000261674 IL19Q9UHD0 177 aa11.84□□□□□ -0.51
SFSWAP-201ENST00000261674 IGKV1OR2-108A0A075B7D4 117 aa11.83□□□□□ -0.52
SFSWAP-201ENST00000261674 TRAV34A0A0B4J273 112 aa11.83□□□□□ -0.52
SFSWAP-201ENST00000261674 TRGV8A0A0C4DH27 118 aa11.83□□□□□ -0.52
SFSWAP-201ENST00000261674 IRF2P14316 349 aa11.83□□□□□ -0.52
SFSWAP-201ENST00000261674 FOSL1P15407 271 aa11.83□□□□□ -0.52
SFSWAP-201ENST00000261674 YPEL3P61236 119 aaPredicted RBP11.83□□□□□ -0.52
SFSWAP-201ENST00000261674 C17orf58Q2M2W7 97 aa11.83□□□□□ -0.52
SFSWAP-201ENST00000261674 OR52E5Q8NH55 327 aa11.83□□□□□ -0.52
SFSWAP-201ENST00000261674 OR2T6Q8NHC8 308 aa11.83□□□□□ -0.52
SFSWAP-201ENST00000261674 TXNDC17Q9BRA2 123 aa11.83□□□□□ -0.52
SFSWAP-201ENST00000261674 SLC45A2Q9UMX9 530 aa11.83□□□□□ -0.52
SFSWAP-201ENST00000261674 FLNCQ14315 2725 aa11.83□□□□□ -0.52
SFSWAP-201ENST00000261674 RAB7AP51149 207 aa11.83□□□□□ -0.52
SFSWAP-201ENST00000261674 LGALS4P56470 323 aa11.83□□□□□ -0.52
SFSWAP-201ENST00000261674 KBTBD11-OT1A0A1B0GTJ5 212 aa11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 SRIP30626 198 aa11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 TFPI2P48307 235 aa11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 LINC00310P59036 64 aa11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 RANP62826 216 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 PPIAL4AQ9Y536 164 aa11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 ZNF462Q96JM2 2506 aa11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 LINC00869P0C866 280 aa11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 TNFAIP6P98066 277 aaPredicted RBP11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 TECRQ9NZ01 308 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 DYSFO75923 2080 aa11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 ASH1LQ9NR48 2969 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 CHRNB4P30926 498 aa11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 MBNL2Q5VZF2 373 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 WNT10AQ9GZT5 417 aa11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 TBL2Q9Y4P3 447 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 RNF114Q9Y508 228 aa11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 V9GYV3 84 aa11.82□□□□□ -0.52
SFSWAP-201ENST00000261674 DIRC3C9JPN6 131 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 F2RL2O00254 374 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 TNFSF13O75888 250 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 SELENOVP59797 346 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 PAFAH1B2P68402 229 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 IBA57Q5T440 356 aaKnown RBP11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 COMMD5Q9GZQ3 224 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 TMEM14BQ9NUH8 114 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 DKK4Q9UBT3 224 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 SPG11Q96JI7 2443 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 IGHG3P01860 377 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 UBE2L3P68036 154 aaKnown RBP11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 TMEM183BQ1AE95 376 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 MORN5Q5VZ52 161 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 SEM1Q6ZVN7 128 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 RCHY1Q96PM5 261 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 PLSCR4Q9NRQ2 329 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 ZNF586Q9NXT0 402 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 FBXL7Q9UJT9 491 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 SLC25A15Q9Y619 301 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 GGTLC3B5MD39 225 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 PRB1P04280 392 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 OR5G3P0C626 314 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 PYYP10082 97 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 PRB4P10163 310 aaPredicted RBP11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 KIR2DS2P43631 304 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 TDGF1P3P51864 188 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 TMEM249Q2WGJ8 235 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 C10orf55Q5SWW7 151 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 TPTE2P1Q5T6R2 138 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 DDB2Q92466 427 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 CORO2AQ92828 525 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 NEU1Q99519 415 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 TUBG2Q9NRH3 451 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 TMEM167BQ9NRX6 74 aa11.81□□□□□ -0.52
SFSWAP-201ENST00000261674 HIVEP3Q5T1R4 2406 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 IGHV3-21A0A0B4J1V1 117 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 CAMPP49913 170 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 RTL8BQ17RB0 113 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 H1FXQ92522 213 aaKnown RBP11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 FAM168AQ92567 244 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 ZNF355PQ9NSJ1 428 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 RNF7Q9UBF6 113 aa11.8□□□□□ -0.52
SFSWAP-201ENST00000261674 FAM90A9PA6NNJ1 464 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms