RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 PROCRQ9UNN8 238 aa7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 HCFC2Q9Y5Z7 792 aa7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 ARID1BQ8NFD5 2236 aaPredicted RBP7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 IGHV3-43A0A0B4J1X8 118 aa7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 TRAV2A0A0B4J234 112 aa7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 SNAI2O43623 268 aa7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 OR2H2O95918 312 aa7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 IGHV3-43DP0DP04 118 aa7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 C9orf153Q5TBE3 101 aa7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 RFESDQ8TAC1 157 aa7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 IFI27L2Q9H2X8 130 aa7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 SPTY2D1-AS1A0A0U1RR47 76 aa7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 NPIPB6E9PJ23 425 aa7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 IFNL4K9M1U5 179 aa7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 CACNG7P62955 275 aa7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 KIR2DL4Q99706 377 aa7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 PTPRSQ13332 1948 aa7.02□□□□□ -1.29
SNCAIP-201ENST00000261367 CD40P25942 277 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 DGAT2L7PQ6IED9 249 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 ASCL4Q6XD76 172 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 DEFB123Q8N688 67 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 KIR3DL3Q8N743 410 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 C12orf49Q9H741 205 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 PLXNB3Q9ULL4 1909 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 IGKV1-8A0A0C4DH67 115 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 G3V4G9 280 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 IGHV3-9P01782 118 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 CXCL12P48061 93 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 C12orf76Q8N812 135 aaPredicted RBP7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 SARAFQ96BY9 339 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 RNASE7Q9H1E1 156 aaKnown RBP7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 ALPK2Q86TB3 2170 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 PEBP1P30086 187 aaKnown RBP7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 DRD3P35462 400 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 QRFPP83859 136 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 SRSF1Q07955 248 aaKnown RBP eCLIP7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 TMEM78Q5T7P6 136 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 CRIPAKQ8N1N5 446 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 OR9G1Q8NH87 305 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 C18orf32Q8TCD1 76 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 SCGB3A1Q96QR1 104 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 CHAC1Q9BUX1 264 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 ERG28Q9UKR5 140 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 TRBV20OR9-2A0A075B6H5 130 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 NBEAP1P0C6P0 100 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 ZNF83P51522 516 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 EGR4Q05215 589 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 UBALD2Q8IYN6 164 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 RPP25LQ8N5L8 163 aaKnown RBP7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 ONECUT1Q9UBC0 465 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 ATG2BQ96BY7 2078 aa7.01□□□□□ -1.29
SNCAIP-201ENST00000261367 SH2D7A6NKC9 451 aaPredicted RBP7□□□□□ -1.29
SNCAIP-201ENST00000261367 H7C2G1 150 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 C1QTNF4Q9BXJ3 329 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 EPDR1Q9UM22 224 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 TRBV6-6A0A0A6YYG2 114 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 LEPP41159 167 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 LGALS9BQ3B8N2 356 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 LGALS9CQ6DKI2 356 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 INO80CQ6PI98 192 aaPredicted RBP7□□□□□ -1.29
SNCAIP-201ENST00000261367 MOB3BQ86TA1 216 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 OR4C13Q8NGP0 309 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 ATP6V0E2Q8NHE4 81 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 SPXQ9BT56 116 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 hDV102S1A0JD36 115 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 ZNF688P0C7X2 276 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 RPL15P61313 204 aaKnown RBP7□□□□□ -1.29
SNCAIP-201ENST00000261367 FAM231DQ6ZW35 169 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 DEFB119Q8N690 84 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 COQ2Q96H96 371 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 MMP17Q9ULZ9 603 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 MGPP08493 103 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 GFRA1P56159 465 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 PSG4Q00888 419 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 KLF5Q13887 457 aaPredicted RBP7□□□□□ -1.29
SNCAIP-201ENST00000261367 FAM53AQ6NSI3 398 aaPredicted RBP7□□□□□ -1.29
SNCAIP-201ENST00000261367 WIPF2Q8TF74 440 aaPredicted RBP7□□□□□ -1.29
SNCAIP-201ENST00000261367 FAM222BQ8WU58 562 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 VGLL1Q99990 258 aa7□□□□□ -1.29
SNCAIP-201ENST00000261367 F2Z2F3 143 aa6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 LMO7DNF2Z398 122 aa6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 TM4SF20Q53R12 229 aa6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 CRIM1Q9NZV1 1036 aa6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 TRGV8A0A0C4DH27 118 aa6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 RPL27AP46776 148 aaKnown RBP6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 RPL11P62913 178 aaKnown RBP6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 SLAQ13239 276 aa6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 EFNB3Q15768 340 aa6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 VSIRQ9H7M9 311 aa6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 ZNF492Q9P255 531 aa6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 ZNF319Q9P2F9 582 aa6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 A0A0A6YYD4 124 aa6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 CDX4O14627 284 aaPredicted RBP6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 EFEMP2O95967 443 aa6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 CXCL10P02778 98 aa6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 IL15RAQ13261 267 aa6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 KRTCAP3Q53RY4 240 aa6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 WDR82Q6UXN9 313 aa6.99□□□□□ -1.29
SNCAIP-201ENST00000261367 CCL4L1Q8NHW4 92 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms