RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 PI3P19957 117 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 KHDC1LQ5JSQ8 128 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 TMEM14EPQ6UXP3 125 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 GJC3Q8NFK1 279 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 FAM3DQ96BQ1 224 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 ALKBH4Q9NXW9 302 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 LOC107986453A0A1B0GWG9 222 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 K7EQS6 105 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 PFN2P35080 140 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 CLDN17P56750 224 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 CFAP126Q5VTH2 177 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 TMEM200BQ69YZ2 307 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 GAGE2AQ6NT46 116 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 PHLDA1Q8WV24 401 aaPredicted RBP6.35□□□□□ -1.39
GPNMB-201ENST00000258733 LINC00526Q96FQ7 95 aa6.35□□□□□ -1.39
GPNMB-201ENST00000258733 DNAJB12Q9NXW2 375 aaKnown RBP6.35□□□□□ -1.39
GPNMB-201ENST00000258733 MDFIC2A0A1B0GVS7 189 aa6.34□□□□□ -1.39
GPNMB-201ENST00000258733 STC2O76061 302 aa6.34□□□□□ -1.39
GPNMB-201ENST00000258733 NTN1O95631 604 aa6.34□□□□□ -1.39
GPNMB-201ENST00000258733 APCSP02743 223 aa6.34□□□□□ -1.39
GPNMB-201ENST00000258733 ZNF117Q03924 483 aa6.34□□□□□ -1.39
GPNMB-201ENST00000258733 TEN1Q86WV5 123 aa6.34□□□□□ -1.39
GPNMB-201ENST00000258733 IGFBPL1Q8WX77 278 aa6.34□□□□□ -1.39
GPNMB-201ENST00000258733 OR1A2Q9Y585 309 aa6.34□□□□□ -1.39
GPNMB-201ENST00000258733 KMT2EQ8IZD2 1858 aa6.34□□□□□ -1.39
GPNMB-201ENST00000258733 RBAKDNA6NC62 111 aa6.34□□□□□ -1.39
GPNMB-201ENST00000258733 CPSF4LA6NMK7 179 aaKnown RBP6.34□□□□□ -1.39
GPNMB-201ENST00000258733 IGLL5B9A064 214 aa6.34□□□□□ -1.39
GPNMB-201ENST00000258733 BMPR1BO00238 502 aa6.34□□□□□ -1.39
GPNMB-201ENST00000258733 SMCPP49901 116 aaPredicted RBP6.34□□□□□ -1.39
GPNMB-201ENST00000258733 RPS4XP62701 263 aaKnown RBP6.34□□□□□ -1.39
GPNMB-201ENST00000258733 CDSNQ15517 529 aa6.34□□□□□ -1.39
GPNMB-201ENST00000258733 SP6Q3SY56 376 aa6.34□□□□□ -1.39
GPNMB-201ENST00000258733 TRAPPC6BQ86SZ2 158 aa6.34□□□□□ -1.39
GPNMB-201ENST00000258733 GVQW1Q8N7I0 195 aa6.34□□□□□ -1.39
GPNMB-201ENST00000258733 MRPL24Q96A35 216 aaKnown RBP6.34□□□□□ -1.39
GPNMB-201ENST00000258733 TEX22C9J3V5 150 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 CHEK1O14757 476 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 NUDT14O95848 222 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 ASAH2BP0C7U1 165 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 BCL3P20749 454 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 UTRNP46939 3433 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 SGSHP51688 502 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 OR11H6Q8NGC7 330 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 DLX4Q92988 240 aaPredicted RBP6.33□□□□□ -1.4
GPNMB-201ENST00000258733 F11RQ9Y624 299 aaKnown RBP6.33□□□□□ -1.4
GPNMB-201ENST00000258733 A0A0U1RQV1 116 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 SMIM28A0A1B0GU29 152 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 CFPP27918 469 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 ARL16Q0P5N6 197 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 RFLNBQ8N5W9 214 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 TMEM171Q8WVE6 324 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 KLK6Q92876 244 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 ELSPBP1Q96BH3 223 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 C1QTNF5Q9BXJ0 243 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 IL36BQ9NZH7 164 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 SIT1Q9Y3P8 196 aa6.33□□□□□ -1.4
GPNMB-201ENST00000258733 A8MWL6 223 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 K7ERJ3 54 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 CCL22O00626 93 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 FRMD6-AS1P0C7T7 363 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 TESK1Q15569 626 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 WFDC6Q9BQY6 131 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 TPSG1Q9NRR2 321 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 TMEM74BQ9NUR3 256 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 PEMTQ9UBM1 199 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 LMO7DNF2Z398 122 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 PTGESO14684 152 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 RRHO14718 337 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 OVOL1O14753 267 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 DSCR4P56555 118 aaPredicted RBP6.32□□□□□ -1.4
GPNMB-201ENST00000258733 PMS2CLQ68D20 193 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 ABCA7Q8IZY2 2146 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 WDR31Q8NA23 367 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 OR9G1Q8NH87 305 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 IL1F10Q8WWZ1 152 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 RND1Q92730 232 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 R3HDMLQ9H3Y0 253 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 HEYLQ9NQ87 328 aaPredicted RBP6.32□□□□□ -1.4
GPNMB-201ENST00000258733 GNG12Q9UBI6 72 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 FAM90A10PA6NDY2 464 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 WNT10BO00744 389 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 CDX4O14627 284 aaPredicted RBP6.32□□□□□ -1.4
GPNMB-201ENST00000258733 CD164Q04900 197 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 ZNF726P1Q15940 193 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 OR4C11Q6IEV9 310 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 WFDC3Q8IUB2 231 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 TMEFF1Q8IYR6 380 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 OR5C1Q8NGR4 320 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 PLEKHB2Q96CS7 222 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 PLA2G2FQ9BZM2 168 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 TNFRSF19Q9NS68 423 aa6.32□□□□□ -1.4
GPNMB-201ENST00000258733 LY6LH3BQJ8 138 aa6.31□□□□□ -1.4
GPNMB-201ENST00000258733 LMX1BO60663 402 aa6.31□□□□□ -1.4
GPNMB-201ENST00000258733 NKX2-2O95096 273 aa6.31□□□□□ -1.4
GPNMB-201ENST00000258733 SLC25A14O95258 325 aaPredicted RBP6.31□□□□□ -1.4
GPNMB-201ENST00000258733 MPV17P39210 176 aa6.31□□□□□ -1.4
GPNMB-201ENST00000258733 MAGEA5P43359 124 aa6.31□□□□□ -1.4
GPNMB-201ENST00000258733 FXYD2P54710 66 aa6.31□□□□□ -1.4
GPNMB-201ENST00000258733 CLDN2P57739 230 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms