RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 HINT2Q9BX68 163 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 Q9H521 79 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 PRNDQ9UKY0 176 aa7.58□□□□□ -1.2
VPS50-201ENST00000251739 ZNF207O43670 478 aaKnown RBP7.57□□□□□ -1.2
VPS50-201ENST00000251739 IGKV1-39P01597 117 aa7.57□□□□□ -1.2
VPS50-201ENST00000251739 PMP2P02689 132 aa7.57□□□□□ -1.2
VPS50-201ENST00000251739 IGKV1D-39P04432 117 aa7.57□□□□□ -1.2
VPS50-201ENST00000251739 RPL35AP18077 110 aaKnown RBP7.57□□□□□ -1.2
VPS50-201ENST00000251739 S100A1P23297 94 aa7.57□□□□□ -1.2
VPS50-201ENST00000251739 ZNF124Q15973 351 aa7.57□□□□□ -1.2
VPS50-201ENST00000251739 TMEM69Q5SWH9 247 aa7.57□□□□□ -1.2
VPS50-201ENST00000251739 CMTM1Q8IZ96 169 aa7.57□□□□□ -1.2
VPS50-201ENST00000251739 SAMD12Q8N8I0 201 aa7.57□□□□□ -1.2
VPS50-201ENST00000251739 OR5H2Q8NGV7 314 aa7.57□□□□□ -1.2
VPS50-201ENST00000251739 GPX8Q8TED1 209 aa7.57□□□□□ -1.2
VPS50-201ENST00000251739 S100A16Q96FQ6 103 aaKnown RBP7.57□□□□□ -1.2
VPS50-201ENST00000251739 TMEM56Q96MV1 263 aa7.57□□□□□ -1.2
VPS50-201ENST00000251739 RHPN1-AS1Q9BWJ2 59 aa7.57□□□□□ -1.2
VPS50-201ENST00000251739 NXF2Q9GZY0 626 aaKnown RBP7.57□□□□□ -1.2
VPS50-201ENST00000251739 C11orf68Q9H3H3 251 aaKnown RBP7.57□□□□□ -1.2
VPS50-201ENST00000251739 FKBP11Q9NYL4 201 aa7.57□□□□□ -1.2
VPS50-201ENST00000251739 KIAA1109Q2LD37 5005 aa7.56□□□□□ -1.2
VPS50-201ENST00000251739 PFDN1O60925 122 aa7.56□□□□□ -1.2
VPS50-201ENST00000251739 ATP6V1G1O75348 118 aa7.56□□□□□ -1.2
VPS50-201ENST00000251739 SNAPC5O75971 98 aa7.56□□□□□ -1.2
VPS50-201ENST00000251739 HRH1P35367 487 aa7.56□□□□□ -1.2
VPS50-201ENST00000251739 RPS19P39019 145 aaKnown RBP7.56□□□□□ -1.2
VPS50-201ENST00000251739 PRCDQ00LT1 54 aa7.56□□□□□ -1.2
VPS50-201ENST00000251739 RELQ04864 619 aaPredicted RBP7.56□□□□□ -1.2
VPS50-201ENST00000251739 KIR3DS1Q14943 382 aa7.56□□□□□ -1.2
VPS50-201ENST00000251739 Q56UQ5 140 aa7.56□□□□□ -1.2
VPS50-201ENST00000251739 APRG1Q8IVJ8 170 aa7.56□□□□□ -1.2
VPS50-201ENST00000251739 RPP25LQ8N5L8 163 aaKnown RBP7.56□□□□□ -1.2
VPS50-201ENST00000251739 TMEM217Q8N7C4 229 aa7.56□□□□□ -1.2
VPS50-201ENST00000251739 UBAC2Q8NBM4 344 aa7.56□□□□□ -1.2
VPS50-201ENST00000251739 TMEM116Q8NCL8 245 aa7.56□□□□□ -1.2
VPS50-201ENST00000251739 GATAD1Q8WUU5 269 aa7.56□□□□□ -1.2
VPS50-201ENST00000251739 PHLDA1Q8WV24 401 aaPredicted RBP7.56□□□□□ -1.2
VPS50-201ENST00000251739 TXN2Q99757 166 aa7.56□□□□□ -1.2
VPS50-201ENST00000251739 KLK5Q9Y337 293 aaPredicted RBP7.56□□□□□ -1.2
VPS50-201ENST00000251739 FAT2Q9NYQ8 4349 aa7.56□□□□□ -1.2
VPS50-201ENST00000251739 PCLOQ9Y6V0 5065 aa7.55□□□□□ -1.2
VPS50-201ENST00000251739 DNAH17Q9UFH2 4485 aa7.55□□□□□ -1.2
VPS50-201ENST00000251739 NUPL2O15504 423 aaKnown RBP7.55□□□□□ -1.2
VPS50-201ENST00000251739 MT-CO2P00403 227 aa7.55□□□□□ -1.2
VPS50-201ENST00000251739 P0C879 139 aa7.55□□□□□ -1.2
VPS50-201ENST00000251739 PRSS3P35030 304 aa7.55□□□□□ -1.2
VPS50-201ENST00000251739 MFAP4P55083 255 aa7.55□□□□□ -1.2
VPS50-201ENST00000251739 UCP3P55916 312 aa7.55□□□□□ -1.2
VPS50-201ENST00000251739 PHLDA2Q53GA4 152 aa7.55□□□□□ -1.2
VPS50-201ENST00000251739 LGALS9CQ6DKI2 356 aa7.55□□□□□ -1.2
VPS50-201ENST00000251739 PVRIGQ6DKI7 326 aa7.55□□□□□ -1.2
VPS50-201ENST00000251739 OR6F1Q8NGZ6 308 aa7.55□□□□□ -1.2
VPS50-201ENST00000251739 SLC25A46Q96AG3 418 aa7.55□□□□□ -1.2
VPS50-201ENST00000251739 YIPF6Q96EC8 236 aa7.55□□□□□ -1.2
VPS50-201ENST00000251739 CSTL1Q9H114 145 aa7.55□□□□□ -1.2
VPS50-201ENST00000251739 VSIRQ9H7M9 311 aa7.55□□□□□ -1.2
VPS50-201ENST00000251739 PKHD1P08F94 4074 aa7.54□□□□□ -1.2
VPS50-201ENST00000251739 IGHV3-49A0A0A0MS15 119 aa7.54□□□□□ -1.2
VPS50-201ENST00000251739 MPTX1A8MV57 137 aa7.54□□□□□ -1.2
VPS50-201ENST00000251739 INS-IGF2F8WCM5 200 aa7.54□□□□□ -1.2
VPS50-201ENST00000251739 EIF4EP06730 217 aaKnown RBP7.54□□□□□ -1.2
VPS50-201ENST00000251739 HLA-DMAP28067 261 aa7.54□□□□□ -1.2
VPS50-201ENST00000251739 CMC4P56277 68 aaPredicted RBP7.54□□□□□ -1.2
VPS50-201ENST00000251739 HSPE1P61604 102 aaKnown RBP7.54□□□□□ -1.2
VPS50-201ENST00000251739 MLANAQ16655 118 aa7.54□□□□□ -1.2
VPS50-201ENST00000251739 TBC1D26Q86UD7 250 aa7.54□□□□□ -1.2
VPS50-201ENST00000251739 LILRB2Q8N423 598 aa7.54□□□□□ -1.2
VPS50-201ENST00000251739 MRGPRFQ96AM1 343 aa7.54□□□□□ -1.2
VPS50-201ENST00000251739 KRTAP17-1Q9BYP8 105 aa7.54□□□□□ -1.2
VPS50-201ENST00000251739 C6orf62Q9GZU0 229 aaPredicted RBP7.54□□□□□ -1.2
VPS50-201ENST00000251739 SCPEP1Q9HB40 452 aa7.54□□□□□ -1.2
VPS50-201ENST00000251739 NDUFA13Q9P0J0 144 aa7.54□□□□□ -1.2
VPS50-201ENST00000251739 DNAH2Q9P225 4427 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 IGHV3OR16-13A0A075B7E8 117 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 TRAV14DV4A0A0A6YYC5 116 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 IGHV3-74A0A0B4J1X5 117 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 TRAV2A0A0B4J234 112 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 DEDDO75618 318 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 IGKV1-5P01602 117 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 IGHV3-48P01763 117 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 APOA1P02647 267 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 CD5P06127 495 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 NDUFA5Q16718 116 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 LPCAT3Q6P1A2 487 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 TOMM20LQ6UXN7 152 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 TSPAN14Q8NG11 270 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 ST8SIA2Q92186 375 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 RARRES2Q99969 163 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 RABL2BQ9UNT1 228 aa7.53□□□□□ -1.2
VPS50-201ENST00000251739 A0A1B0GU03 582 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 GNG7O60262 68 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 DFFBO76075 338 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 YIF1AO95070 293 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 APOHP02749 345 aaPredicted RBP7.52□□□□□ -1.21
VPS50-201ENST00000251739 GIG44P09565 113 aaPredicted RBP7.52□□□□□ -1.21
VPS50-201ENST00000251739 RCVRNP35243 200 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 TFPI2P48307 235 aa7.52□□□□□ -1.21
VPS50-201ENST00000251739 NANOS2P60321 138 aaKnown RBP7.52□□□□□ -1.21
VPS50-201ENST00000251739 RND3P61587 244 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms