RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CLDN34H7C241 214 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 ITGB1BP1O14713 200 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 CD33P20138 364 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 LRRC10Q5BKY1 277 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 CORO2AQ92828 525 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 VPS25Q9BRG1 176 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 SEPSECSQ9HD40 501 aaKnown RBP12.84□□□□□ -0.35
LRFN1-201ENST00000248668 NAT8Q9UHE5 227 aa12.84□□□□□ -0.35
LRFN1-201ENST00000248668 KBTBD11O94819 623 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 RPL23P62829 140 aaKnown RBP12.83□□□□□ -0.36
LRFN1-201ENST00000248668 PRSS8Q16651 343 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 DNLZQ5SXM8 178 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 TMEM183AQ8IXX5 376 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 NCOR1P1Q9H4R4 102 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 XKRY2A2RUG3 117 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 VSTM5A8MXK1 200 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 LY6HO94772 140 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 IL6RP08887 468 aaPredicted RBP12.83□□□□□ -0.36
LRFN1-201ENST00000248668 PNRC1Q12796 327 aaPredicted RBP12.83□□□□□ -0.36
LRFN1-201ENST00000248668 BSXQ3C1V8 233 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 STPG3Q8N7X2 389 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 NPVFQ9HCQ7 196 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 WNK2Q9Y3S1 2297 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 E7EUB6 86 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 UPK2O00526 184 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 APELAP0DMC3 54 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 CDSNQ15517 529 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 MANBALQ9NQG1 85 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 SSUH2Q9Y2M2 353 aa12.83□□□□□ -0.36
LRFN1-201ENST00000248668 TEX50A0A1B0GTY4 177 aa12.82□□□□□ -0.36
LRFN1-201ENST00000248668 FOXH1O75593 365 aa12.82□□□□□ -0.36
LRFN1-201ENST00000248668 OR1P1Q8NH06 330 aa12.82□□□□□ -0.36
LRFN1-201ENST00000248668 TMEM37Q8WXS4 190 aa12.82□□□□□ -0.36
LRFN1-201ENST00000248668 NEIL1Q96FI4 390 aaPredicted RBP12.82□□□□□ -0.36
LRFN1-201ENST00000248668 NGBQ9NPG2 151 aa12.82□□□□□ -0.36
LRFN1-201ENST00000248668 NDUFB4O95168 129 aa12.82□□□□□ -0.36
LRFN1-201ENST00000248668 PTTG1IPP53801 180 aa12.82□□□□□ -0.36
LRFN1-201ENST00000248668 TEPPQ6URK8 271 aa12.82□□□□□ -0.36
LRFN1-201ENST00000248668 FAM216AQ8WUB2 273 aa12.82□□□□□ -0.36
LRFN1-201ENST00000248668 APOA2P02652 100 aa12.81□□□□□ -0.36
LRFN1-201ENST00000248668 OPRK1P41145 380 aa12.81□□□□□ -0.36
LRFN1-201ENST00000248668 CYP2G1PQ6ZSU1 146 aa12.81□□□□□ -0.36
LRFN1-201ENST00000248668 PRNDQ9UKY0 176 aa12.81□□□□□ -0.36
LRFN1-201ENST00000248668 IGHV1-69-2A0A0G2JMI3 117 aa12.81□□□□□ -0.36
LRFN1-201ENST00000248668 ENSAO43768 121 aaKnown RBP12.81□□□□□ -0.36
LRFN1-201ENST00000248668 CD3EP07766 207 aa12.81□□□□□ -0.36
LRFN1-201ENST00000248668 LOXP28300 417 aaPredicted RBP12.81□□□□□ -0.36
LRFN1-201ENST00000248668 CHRNA7P36544 502 aa12.81□□□□□ -0.36
LRFN1-201ENST00000248668 B4DEV8 164 aa12.81□□□□□ -0.36
LRFN1-201ENST00000248668 H0YJW9 148 aa12.81□□□□□ -0.36
LRFN1-201ENST00000248668 CCL21O00585 134 aa12.81□□□□□ -0.36
LRFN1-201ENST00000248668 Q5PR19 223 aa12.81□□□□□ -0.36
LRFN1-201ENST00000248668 VKORC1Q9BQB6 163 aa12.81□□□□□ -0.36
LRFN1-201ENST00000248668 LINC00574Q9H8X3 128 aa12.81□□□□□ -0.36
LRFN1-201ENST00000248668 GNB1P62873 340 aa12.8□□□□□ -0.36
LRFN1-201ENST00000248668 RITA1Q96K30 269 aa12.8□□□□□ -0.36
LRFN1-201ENST00000248668 ACACBO00763 2458 aa12.8□□□□□ -0.36
LRFN1-201ENST00000248668 TMEM250H0YL14 139 aa12.8□□□□□ -0.36
LRFN1-201ENST00000248668 S100A7AQ86SG5 101 aa12.8□□□□□ -0.36
LRFN1-201ENST00000248668 COMMD5Q9GZQ3 224 aa12.8□□□□□ -0.36
LRFN1-201ENST00000248668 LSM4Q9Y4Z0 139 aaKnown RBP12.8□□□□□ -0.36
LRFN1-201ENST00000248668 REG1AP05451 166 aa12.8□□□□□ -0.36
LRFN1-201ENST00000248668 PRCDQ00LT1 54 aa12.8□□□□□ -0.36
LRFN1-201ENST00000248668 MEF2CQ06413 473 aaPredicted RBP12.8□□□□□ -0.36
LRFN1-201ENST00000248668 EFNB3Q15768 340 aa12.8□□□□□ -0.36
LRFN1-201ENST00000248668 ZNF833PQ6ZTB9 187 aa12.8□□□□□ -0.36
LRFN1-201ENST00000248668 OR4P4Q8NGL7 312 aa12.8□□□□□ -0.36
LRFN1-201ENST00000248668 FLYWCH2Q96CP2 140 aaKnown RBP12.8□□□□□ -0.36
LRFN1-201ENST00000248668 TPSG1Q9NRR2 321 aa12.8□□□□□ -0.36
LRFN1-201ENST00000248668 IGKV1OR2-108A0A075B7D4 117 aa12.79□□□□□ -0.36
LRFN1-201ENST00000248668 H7BYZ3 331 aa12.79□□□□□ -0.36
LRFN1-201ENST00000248668 MPDU1O75352 247 aa12.79□□□□□ -0.36
LRFN1-201ENST00000248668 FAM78BQ5VT40 261 aa12.79□□□□□ -0.36
LRFN1-201ENST00000248668 ERASQ7Z444 233 aa12.79□□□□□ -0.36
LRFN1-201ENST00000248668 OR10A7Q8NGE5 316 aa12.79□□□□□ -0.36
LRFN1-201ENST00000248668 OR9G1Q8NH87 305 aa12.79□□□□□ -0.36
LRFN1-201ENST00000248668 ACY3Q96HD9 319 aa12.79□□□□□ -0.36
LRFN1-201ENST00000248668 RPH3ALQ9UNE2 315 aa12.79□□□□□ -0.36
LRFN1-201ENST00000248668 HRNRQ86YZ3 2850 aaPredicted RBP12.79□□□□□ -0.36
LRFN1-201ENST00000248668 A0A1W2PPQ1 181 aa12.79□□□□□ -0.36
LRFN1-201ENST00000248668 APOBEC3AP31941 199 aaPredicted RBP12.79□□□□□ -0.36
LRFN1-201ENST00000248668 Q6ZVH6 145 aa12.79□□□□□ -0.36
LRFN1-201ENST00000248668 ZNF114Q8NC26 417 aa12.79□□□□□ -0.36
LRFN1-201ENST00000248668 HIVEP3Q5T1R4 2406 aa12.79□□□□□ -0.36
LRFN1-201ENST00000248668 A0A0U1RQK1 487 aa12.78□□□□□ -0.36
LRFN1-201ENST00000248668 A0A1B0GUS0 222 aa12.78□□□□□ -0.36
LRFN1-201ENST00000248668 ERVFC1-1P60608 527 aa12.78□□□□□ -0.36
LRFN1-201ENST00000248668 MIR17HGQ75NE6 70 aa12.78□□□□□ -0.36
LRFN1-201ENST00000248668 LPAR2Q9HBW0 351 aa12.78□□□□□ -0.36
LRFN1-201ENST00000248668 PAM16Q9Y3D7 125 aa12.78□□□□□ -0.36
LRFN1-201ENST00000248668 SCO2A0A1W2PP80 73 aa12.78□□□□□ -0.36
LRFN1-201ENST00000248668 SLC25A17O43808 307 aa12.78□□□□□ -0.36
LRFN1-201ENST00000248668 TMPRSS3P57727 454 aa12.78□□□□□ -0.36
LRFN1-201ENST00000248668 OR1L6Q8NGR2 347 aa12.78□□□□□ -0.36
LRFN1-201ENST00000248668 OR2T6Q8NHC8 308 aa12.78□□□□□ -0.36
LRFN1-201ENST00000248668 IGFBPL1Q8WX77 278 aa12.78□□□□□ -0.36
LRFN1-201ENST00000248668 MSRB2Q9Y3D2 182 aa12.78□□□□□ -0.36
LRFN1-201ENST00000248668 YTHDF2Q9Y5A9 579 aaKnown RBP12.78□□□□□ -0.36
LRFN1-201ENST00000248668 TRAV34A0A0B4J273 112 aa12.78□□□□□ -0.36
LRFN1-201ENST00000248668 C20orf202A1L168 122 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms