RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 TMEM78Q5T7P6 136 aa13.14□□□□□ -0.31
SIN3B-201ENST00000248054 SRSF9Q13242 221 aaKnown RBP eCLIP13.14□□□□□ -0.31
SIN3B-201ENST00000248054 MFAP4P55083 255 aa13.14□□□□□ -0.31
SIN3B-201ENST00000248054 ATP5J2P56134 94 aa13.14□□□□□ -0.31
SIN3B-201ENST00000248054 DLX1P56177 255 aa13.14□□□□□ -0.31
SIN3B-201ENST00000248054 TEX38Q6PEX7 206 aa13.14□□□□□ -0.31
SIN3B-201ENST00000248054 GPR179Q6PRD1 2367 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 A0A1W2PS18 150 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 HLA-DRB1P01911 266 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 PSMB2P49721 201 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 ECSCRQ19T08 205 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 ST6GALNAC3Q8NDV1 305 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 OR4D5Q8NGN0 318 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 CCL19Q99731 98 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 CHODLQ9H9P2 273 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 TRBV24-1A0A075B6N3 115 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 AREGP15514 252 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 MAS1LP35410 378 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 HGFACQ04756 655 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 IL36BQ9NZH7 164 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 K7ENP7 123 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 SRSF6Q13247 344 aaKnown RBP13.13□□□□□ -0.31
SIN3B-201ENST00000248054 OR10AG1Q8NH19 301 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 CACNG8Q8WXS5 425 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 DCTN5Q9BTE1 182 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 MUC22E2RYF6 1773 aaPredicted RBP13.13□□□□□ -0.31
SIN3B-201ENST00000248054 CRYBB3P26998 211 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 SRIP30626 198 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 RELBQ01201 579 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 AP5S1Q9NUS5 200 aa13.13□□□□□ -0.31
SIN3B-201ENST00000248054 WISP1O95388 367 aa13.12□□□□□ -0.31
SIN3B-201ENST00000248054 ATOH7Q8N100 152 aa13.12□□□□□ -0.31
SIN3B-201ENST00000248054 TMEM190Q8WZ59 177 aa13.12□□□□□ -0.31
SIN3B-201ENST00000248054 ANAPC10Q9UM13 185 aa13.12□□□□□ -0.31
SIN3B-201ENST00000248054 TWIST1Q15672 202 aa13.12□□□□□ -0.31
SIN3B-201ENST00000248054 TMEM177Q53S58 311 aa13.12□□□□□ -0.31
SIN3B-201ENST00000248054 Q5PR19 223 aa13.12□□□□□ -0.31
SIN3B-201ENST00000248054 DPF1Q92782 380 aa13.12□□□□□ -0.31
SIN3B-201ENST00000248054 CLEC5AQ9NY25 188 aa13.12□□□□□ -0.31
SIN3B-201ENST00000248054 A0A0G2JNJ9 132 aa13.12□□□□□ -0.31
SIN3B-201ENST00000248054 SUPT4H1P63272 117 aaKnown RBP13.12□□□□□ -0.31
SIN3B-201ENST00000248054 MAP1LC3AQ9H492 121 aa13.12□□□□□ -0.31
SIN3B-201ENST00000248054 Q9UFV3 132 aa13.12□□□□□ -0.31
SIN3B-201ENST00000248054 Q6P435 159 aa13.12□□□□□ -0.31
SIN3B-201ENST00000248054 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.12□□□□□ -0.31
SIN3B-201ENST00000248054 VKORC1L1Q8N0U8 176 aa13.12□□□□□ -0.31
SIN3B-201ENST00000248054 LAMTOR2Q9Y2Q5 125 aa13.12□□□□□ -0.31
SIN3B-201ENST00000248054 IL6RP08887 468 aaPredicted RBP13.11□□□□□ -0.31
SIN3B-201ENST00000248054 CKS2P33552 79 aa13.11□□□□□ -0.31
SIN3B-201ENST00000248054 HCP5Q6MZN7 132 aa13.11□□□□□ -0.31
SIN3B-201ENST00000248054 TCF24Q7RTU0 167 aa13.11□□□□□ -0.31
SIN3B-201ENST00000248054 RNASEH2CQ8TDP1 164 aaKnown RBP13.11□□□□□ -0.31
SIN3B-201ENST00000248054 A0A1B0GW15 77 aa13.11□□□□□ -0.31
SIN3B-201ENST00000248054 ZNF525Q8N782 197 aa13.11□□□□□ -0.31
SIN3B-201ENST00000248054 FABP2P12104 132 aa13.11□□□□□ -0.31
SIN3B-201ENST00000248054 IFI27L2Q9H2X8 130 aa13.11□□□□□ -0.31
SIN3B-201ENST00000248054 SAA2-SAA4A0A096LPE2 208 aa13.11□□□□□ -0.31
SIN3B-201ENST00000248054 SAA2P0DJI9 122 aaPredicted RBP13.11□□□□□ -0.31
SIN3B-201ENST00000248054 DUTP33316 252 aaKnown RBP13.11□□□□□ -0.31
SIN3B-201ENST00000248054 OR52E5Q8NH55 327 aa13.11□□□□□ -0.31
SIN3B-201ENST00000248054 SMIM12Q96EX1 92 aa13.11□□□□□ -0.31
SIN3B-201ENST00000248054 METTL26Q96S19 204 aa13.11□□□□□ -0.31
SIN3B-201ENST00000248054 GAGE10A6NGK3 116 aa13.1□□□□□ -0.31
SIN3B-201ENST00000248054 IGLV3-1P01715 115 aa13.1□□□□□ -0.31
SIN3B-201ENST00000248054 HBBP68871 147 aa13.1□□□□□ -0.31
SIN3B-201ENST00000248054 RFNGQ9Y644 331 aa13.1□□□□□ -0.31
SIN3B-201ENST00000248054 A0A1B0GW64 132 aa13.1□□□□□ -0.31
SIN3B-201ENST00000248054 CENPWQ5EE01 88 aa13.1□□□□□ -0.31
SIN3B-201ENST00000248054 TMEM133Q9H2Q1 129 aa13.1□□□□□ -0.31
SIN3B-201ENST00000248054 UPK2O00526 184 aa13.1□□□□□ -0.31
SIN3B-201ENST00000248054 ZNF474Q6S9Z5 364 aaPredicted RBP13.1□□□□□ -0.31
SIN3B-201ENST00000248054 MED12Q93074 2177 aa13.1□□□□□ -0.31
SIN3B-201ENST00000248054 LYL1P12980 280 aa13.1□□□□□ -0.31
SIN3B-201ENST00000248054 OR10J6PQ8NGY7 276 aa13.1□□□□□ -0.31
SIN3B-201ENST00000248054 MRPL20Q9BYC9 149 aaKnown RBP13.1□□□□□ -0.31
SIN3B-201ENST00000248054 RPUSD1Q9UJJ7 312 aaKnown RBP13.1□□□□□ -0.31
SIN3B-201ENST00000248054 COL4A3Q01955 1670 aa13.09□□□□□ -0.31
SIN3B-201ENST00000248054 C15orf61A6NNL5 157 aa13.09□□□□□ -0.31
SIN3B-201ENST00000248054 TNFSF13O75888 250 aa13.09□□□□□ -0.31
SIN3B-201ENST00000248054 UNQ5815/PRO19632Q6UWF5 114 aa13.09□□□□□ -0.31
SIN3B-201ENST00000248054 APELAP0DMC3 54 aa13.09□□□□□ -0.31
SIN3B-201ENST00000248054 SLC35B1P78383 322 aa13.09□□□□□ -0.31
SIN3B-201ENST00000248054 LDLRAD2Q5SZI1 272 aa13.09□□□□□ -0.31
SIN3B-201ENST00000248054 TMEM242Q9NWH2 141 aa13.09□□□□□ -0.31
SIN3B-201ENST00000248054 DNAJC13O75165 2243 aa13.09□□□□□ -0.31
SIN3B-201ENST00000248054 MGPP08493 103 aa13.09□□□□□ -0.31
SIN3B-201ENST00000248054 GAGE1Q13065 139 aa13.09□□□□□ -0.31
SIN3B-201ENST00000248054 FXYD3Q14802 87 aa13.09□□□□□ -0.31
SIN3B-201ENST00000248054 FBLN7Q53RD9 439 aa13.09□□□□□ -0.31
SIN3B-201ENST00000248054 C1orf147Q96MC9 270 aaPredicted RBP13.08□□□□□ -0.31
SIN3B-201ENST00000248054 FBLL1A6NHQ2 334 aaKnown RBP13.08□□□□□ -0.32
SIN3B-201ENST00000248054 NMUP48645 174 aa13.08□□□□□ -0.32
SIN3B-201ENST00000248054 WNT10AQ9GZT5 417 aa13.08□□□□□ -0.32
SIN3B-201ENST00000248054 TMSB15BA0A087X1C1 80 aa13.08□□□□□ -0.32
SIN3B-201ENST00000248054 THBDP07204 575 aa13.08□□□□□ -0.32
SIN3B-201ENST00000248054 SYT8Q8NBV8 401 aa13.08□□□□□ -0.32
SIN3B-201ENST00000248054 RABAC1Q9UI14 185 aa13.08□□□□□ -0.32
SIN3B-201ENST00000248054 PSPNO60542 156 aa13.08□□□□□ -0.32
SIN3B-201ENST00000248054 CEACAM8P31997 349 aaPredicted RBP13.08□□□□□ -0.32
SIN3B-201ENST00000248054 TCTAP57738 103 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms