RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 RAB24Q969Q5 203 aa10.7□□□□□ -0.7
NUP85-201ENST00000245544 PBDC1Q9BVG4 233 aa10.7□□□□□ -0.7
NUP85-201ENST00000245544 GNG13Q9P2W3 67 aa10.7□□□□□ -0.7
NUP85-201ENST00000245544 CARHSP1Q9Y2V2 147 aaKnown RBP10.7□□□□□ -0.7
NUP85-201ENST00000245544 GATA2P23769 480 aaPredicted RBP10.69□□□□□ -0.7
NUP85-201ENST00000245544 OPRK1P41145 380 aa10.69□□□□□ -0.7
NUP85-201ENST00000245544 NPBQ8NG41 125 aa10.69□□□□□ -0.7
NUP85-201ENST00000245544 SRSF12Q8WXF0 261 aaKnown RBP10.69□□□□□ -0.7
NUP85-201ENST00000245544 MRPL36Q9P0J6 103 aaKnown RBP10.69□□□□□ -0.7
NUP85-201ENST00000245544 ZFP92A6NM28 416 aa10.69□□□□□ -0.7
NUP85-201ENST00000245544 MBP02144 154 aa10.69□□□□□ -0.7
NUP85-201ENST00000245544 ATP5IP56385 69 aaPredicted RBP10.69□□□□□ -0.7
NUP85-201ENST00000245544 BTN1A1Q13410 526 aa10.69□□□□□ -0.7
NUP85-201ENST00000245544 CCDC144NLQ6NUI1 221 aa10.69□□□□□ -0.7
NUP85-201ENST00000245544 STPG3Q8N7X2 389 aa10.69□□□□□ -0.7
NUP85-201ENST00000245544 RXFP4Q8TDU9 374 aa10.69□□□□□ -0.7
NUP85-201ENST00000245544 DMRT1Q9Y5R6 373 aa10.69□□□□□ -0.7
NUP85-201ENST00000245544 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.68□□□□□ -0.71e-7■■■■■ 28.2
NUP85-201ENST00000245544 CTXND1A0A1B0GTU2 59 aa10.68□□□□□ -0.7
NUP85-201ENST00000245544 NDUFA3O95167 84 aa10.68□□□□□ -0.7
NUP85-201ENST00000245544 MAS1LP35410 378 aa10.68□□□□□ -0.7
NUP85-201ENST00000245544 ACOT6Q3I5F7 207 aaPredicted RBP10.68□□□□□ -0.7
NUP85-201ENST00000245544 SLC16A13Q7RTY0 426 aa10.68□□□□□ -0.7
NUP85-201ENST00000245544 TMEM144Q7Z5S9 345 aa10.68□□□□□ -0.7
NUP85-201ENST00000245544 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.68□□□□□ -0.7
NUP85-201ENST00000245544 OR2T10Q8NGZ9 312 aa10.68□□□□□ -0.7
NUP85-201ENST00000245544 ACY3Q96HD9 319 aa10.68□□□□□ -0.7
NUP85-201ENST00000245544 FAM103A1Q9BTL3 118 aaKnown RBP10.68□□□□□ -0.7
NUP85-201ENST00000245544 ACTR3CQ9C0K3 210 aaPredicted RBP10.68□□□□□ -0.7
NUP85-201ENST00000245544 TBL2Q9Y4P3 447 aaKnown RBP10.68□□□□□ -0.7
NUP85-201ENST00000245544 CSPG4Q6UVK1 2322 aa10.68□□□□□ -0.7
NUP85-201ENST00000245544 OOSP1A8MZH6 123 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 FNDC10F2Z333 226 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 NPFFO15130 113 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 PAX1P15863 534 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 B2MP61769 119 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 CLEC12BQ2HXU8 276 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 ZNF506Q5JVG8 444 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 Q8N6K4 173 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 GATAD1Q8WUU5 269 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 SLC35B3Q9H1N7 401 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 IGHV3-21A0A0B4J1V1 117 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 LOC102723971A0A1B0GUV8 181 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 NCBP2LA6PVI3 153 aaKnown RBP10.67□□□□□ -0.7
NUP85-201ENST00000245544 CNIH1O95406 144 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 LINC00869P0C866 280 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 OR10J1P30954 320 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 NPBWR1P48145 328 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 SUB1P53999 127 aaKnown RBP eCLIP10.67□□□□□ -0.7
NUP85-201ENST00000245544 PRR20EP86478 221 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 PRR20CP86479 221 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 PRR20DP86480 221 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 PRR20BP86481 221 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 PRR20AP86496 221 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 C5orf64Q2M2E5 130 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 SPATA31B1PQ5VZV4 182 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 MALSU1Q96EH3 234 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 SLC45A2Q9UMX9 530 aa10.67□□□□□ -0.7
NUP85-201ENST00000245544 NUPL2O15504 423 aaKnown RBP10.66□□□□□ -0.7
NUP85-201ENST00000245544 CYB5BO43169 146 aa10.66□□□□□ -0.7
NUP85-201ENST00000245544 SRP19P09132 144 aaKnown RBP10.66□□□□□ -0.7
NUP85-201ENST00000245544 GPX4P36969 197 aaPredicted RBP10.66□□□□□ -0.7
NUP85-201ENST00000245544 RPL29P47914 159 aaKnown RBP10.66□□□□□ -0.7
NUP85-201ENST00000245544 CDC34P49427 236 aaPredicted RBP10.66□□□□□ -0.7
NUP85-201ENST00000245544 EBI3Q14213 229 aa10.66□□□□□ -0.7
NUP85-201ENST00000245544 PVRIGQ6DKI7 326 aa10.66□□□□□ -0.7
NUP85-201ENST00000245544 BRD3OSQ6XYD6 125 aa10.66□□□□□ -0.7
NUP85-201ENST00000245544 SVBPQ8N300 66 aa10.66□□□□□ -0.7
NUP85-201ENST00000245544 RNASEH2CQ8TDP1 164 aaKnown RBP10.66□□□□□ -0.7
NUP85-201ENST00000245544 CACNG8Q8WXS5 425 aa10.66□□□□□ -0.7
NUP85-201ENST00000245544 MISP3Q96FF7 219 aa10.66□□□□□ -0.7
NUP85-201ENST00000245544 NKX6-2Q9C056 277 aaPredicted RBP10.66□□□□□ -0.7
NUP85-201ENST00000245544 SOX21Q9Y651 276 aaPredicted RBP10.66□□□□□ -0.7
NUP85-201ENST00000245544 SEC14L6B5MCN3 397 aa10.66□□□□□ -0.7
NUP85-201ENST00000245544 TMEM11P17152 192 aa10.66□□□□□ -0.7
NUP85-201ENST00000245544 CEBPGP53567 150 aa10.66□□□□□ -0.7
NUP85-201ENST00000245544 ZNF114Q8NC26 417 aa10.66□□□□□ -0.7
NUP85-201ENST00000245544 ABHD5Q8WTS1 349 aa10.66□□□□□ -0.7
NUP85-201ENST00000245544 NPIPB3Q92617 1050 aa10.66□□□□□ -0.7
NUP85-201ENST00000245544 SEPSECSQ9HD40 501 aaKnown RBP10.66□□□□□ -0.7
NUP85-201ENST00000245544 FAM74A7A6NL05 159 aa10.65□□□□□ -0.7
NUP85-201ENST00000245544 IGHV4-38-2P0DP08 117 aa10.65□□□□□ -0.7
NUP85-201ENST00000245544 BCL2P10415 239 aa10.65□□□□□ -0.7
NUP85-201ENST00000245544 NDPQ00604 133 aa10.65□□□□□ -0.7
NUP85-201ENST00000245544 RAB31Q13636 194 aa10.65□□□□□ -0.7
NUP85-201ENST00000245544 FXYD3Q14802 87 aa10.65□□□□□ -0.7
NUP85-201ENST00000245544 FAM74A3Q4VXF1 159 aa10.65□□□□□ -0.7
NUP85-201ENST00000245544 HIST2H2BCQ6DN03 193 aa10.65□□□□□ -0.7
NUP85-201ENST00000245544 IQCF2Q8IXL9 164 aa10.65□□□□□ -0.7
NUP85-201ENST00000245544 CYB561D1Q8N8Q1 229 aa10.65□□□□□ -0.7
NUP85-201ENST00000245544 SLC25A33Q9BSK2 321 aa10.65□□□□□ -0.7
NUP85-201ENST00000245544 F11RQ9Y624 299 aaKnown RBP10.65□□□□□ -0.7
NUP85-201ENST00000245544 IGKV1D-37A0A075B6S9 117 aa10.64□□□□□ -0.71
NUP85-201ENST00000245544 TRAV40A0A0B4J280 105 aa10.64□□□□□ -0.71
NUP85-201ENST00000245544 MSMBP08118 114 aa10.64□□□□□ -0.71
NUP85-201ENST00000245544 CX3CL1P78423 397 aa10.64□□□□□ -0.71
NUP85-201ENST00000245544 KHDC3LQ587J8 217 aa10.64□□□□□ -0.71
NUP85-201ENST00000245544 MAPK1IP1LQ8NDC0 245 aa10.64□□□□□ -0.71
NUP85-201ENST00000245544 OR1P1Q8NH06 330 aa10.64□□□□□ -0.71
NUP85-201ENST00000245544 SLC35E1Q96K37 410 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms