RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 TMPRSS3P57727 454 aa8.12□□□□□ -1.11
IRF1-201ENST00000245414 RNPS1Q15287 305 aaKnown RBP8.12□□□□□ -1.11
IRF1-201ENST00000245414 CT45A1Q5HYN5 189 aa8.12□□□□□ -1.11
IRF1-201ENST00000245414 CRIPAKQ8N1N5 446 aa8.12□□□□□ -1.11
IRF1-201ENST00000245414 CT45A3Q8NHU0 189 aa8.12□□□□□ -1.11
IRF1-201ENST00000245414 FAM168AQ92567 244 aa8.12□□□□□ -1.11
IRF1-201ENST00000245414 UCN2Q96RP3 112 aa8.12□□□□□ -1.11
IRF1-201ENST00000245414 NDFIP1Q9BT67 221 aa8.12□□□□□ -1.11
IRF1-201ENST00000245414 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.12□□□□□ -1.11
IRF1-201ENST00000245414 DOPEY2Q9Y3R5 2298 aa8.12□□□□□ -1.11
IRF1-201ENST00000245414 F8W1H4 67 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 PPIFP30405 207 aaKnown RBP8.11□□□□□ -1.11
IRF1-201ENST00000245414 C3AR1Q16581 482 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 TMEM92Q6UXU6 159 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 LRRC29Q8WV35 223 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 IGKV1-6A0A0C4DH72 117 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 P04436 131 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 MYF5P13349 255 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 VDAC2P45880 294 aaPredicted RBP8.11□□□□□ -1.11
IRF1-201ENST00000245414 AMTNQ6UX39 209 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 RAB1CQ92928 201 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 GPR82Q96P67 336 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 NHP2Q9NX24 153 aaKnown RBP8.11□□□□□ -1.11
IRF1-201ENST00000245414 LY96Q9Y6Y9 160 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 A0A0J9YY10 115 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 TMEM150CB9EJG8 249 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 FAM90A26D6RGX4 464 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 CRXO43186 299 aaPredicted RBP8.11□□□□□ -1.11
IRF1-201ENST00000245414 TNFSF14O43557 240 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 SYNGR1O43759 233 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 FOXH1O75593 365 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 CATR1Q13166 79 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 RUNX3Q13761 415 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 GAGE13Q4V321 117 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 C16orf47Q6ZP98 133 aaPredicted RBP8.11□□□□□ -1.11
IRF1-201ENST00000245414 GGTLC1Q9BX51 225 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 C1QTNF4Q9BXJ3 329 aa8.11□□□□□ -1.11
IRF1-201ENST00000245414 SMIM27A0A1W2PRY6 76 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 FRG2CA6NGY1 282 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 KIR2DL2P43627 348 aaPredicted RBP8.1□□□□□ -1.11
IRF1-201ENST00000245414 FOXI2Q6ZQN5 318 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 ALKBH4Q9NXW9 302 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 SPTBN4Q9H254 2564 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 SPINK2P20155 84 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 KLF5Q13887 457 aaPredicted RBP8.1□□□□□ -1.11
IRF1-201ENST00000245414 ZNF585BQ52M93 769 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 H2BFWTQ7Z2G1 175 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 NUP35Q8NFH5 326 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 OR4X2Q8NGF9 303 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 CHRNA10Q9GZZ6 450 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 HIGD1CA8MV81 97 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 BRI3O95415 125 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 RPS21P63220 83 aaKnown RBP8.1□□□□□ -1.11
IRF1-201ENST00000245414 ZNF718Q3SXZ3 478 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 OR10X1Q8NGY0 326 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 C10orf35Q96D05 121 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 WDR83OSQ9Y284 106 aa8.1□□□□□ -1.11
IRF1-201ENST00000245414 ATG2AQ2TAZ0 1938 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 PRR33A8MZF0 331 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 BCL3P20749 454 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 COL8A2P25067 703 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 TRIP6Q15654 476 aaKnown RBP8.09□□□□□ -1.11
IRF1-201ENST00000245414 GDF5OSQ5U4N7 250 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 LILRA6Q6PI73 481 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 BCL6BQ8N143 479 aaPredicted RBP8.09□□□□□ -1.11
IRF1-201ENST00000245414 TEX29Q8N6K0 151 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 FLVCR1-AS1Q8TAF5 88 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 CHCHD1Q96BP2 118 aaKnown RBP8.09□□□□□ -1.11
IRF1-201ENST00000245414 PRDM6Q9NQX0 595 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 LOC400499M0QZD8 3231 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 A0A1W2PRD5 423 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 A0A1W2PRF3 423 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 A0A1W2PRM7 423 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 LIPT2A6NK58 231 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 SMAD7O15105 426 aaKnown RBP8.09□□□□□ -1.11
IRF1-201ENST00000245414 LAMTOR5O43504 91 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 SRSF6Q13247 344 aaKnown RBP8.09□□□□□ -1.11
IRF1-201ENST00000245414 OR9G4Q8NGQ1 327 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 GRAMD2BQ96HH9 432 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 DYSFO75923 2080 aa8.09□□□□□ -1.11
IRF1-201ENST00000245414 FAM90A27PA6NNH2 459 aa8.09□□□□□ -1.12
IRF1-201ENST00000245414 A8MWL6 223 aa8.09□□□□□ -1.12
IRF1-201ENST00000245414 SSBP2P81877 361 aaPredicted RBP8.09□□□□□ -1.12
IRF1-201ENST00000245414 ZFAND6Q6FIF0 208 aa8.09□□□□□ -1.12
IRF1-201ENST00000245414 SLC25A47Q6Q0C1 308 aa8.09□□□□□ -1.12
IRF1-201ENST00000245414 C1RLQ9NZP8 487 aa8.09□□□□□ -1.12
IRF1-201ENST00000245414 MPC1Q9Y5U8 109 aa8.09□□□□□ -1.12
IRF1-201ENST00000245414 OR9G9P0C7N8 305 aa8.08□□□□□ -1.12
IRF1-201ENST00000245414 CA6P23280 308 aa8.08□□□□□ -1.12
IRF1-201ENST00000245414 FCER1GP30273 86 aa8.08□□□□□ -1.12
IRF1-201ENST00000245414 FAM120AOSQ5T036 256 aa8.08□□□□□ -1.12
IRF1-201ENST00000245414 ZADH2Q8N4Q0 377 aa8.08□□□□□ -1.12
IRF1-201ENST00000245414 NPIPB5A8MRT5 1133 aa8.08□□□□□ -1.12
IRF1-201ENST00000245414 K7EMI3 77 aa8.08□□□□□ -1.12
IRF1-201ENST00000245414 Q6ZS52 159 aa8.08□□□□□ -1.12
IRF1-201ENST00000245414 TTC9CQ8N5M4 171 aa8.08□□□□□ -1.12
IRF1-201ENST00000245414 OSR1Q8TAX0 266 aaPredicted RBP8.08□□□□□ -1.12
IRF1-201ENST00000245414 FRYQ5TBA9 3013 aa8.08□□□□□ -1.12
IRF1-201ENST00000245414 ATP5J2P56134 94 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms