RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 COMMD5Q9GZQ3 224 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 PRNDQ9UKY0 176 aa12.66□□□□□ -0.38
DDX55-201ENST00000238146 C20orf202A1L168 122 aa12.65□□□□□ -0.38
DDX55-201ENST00000238146 CCL25O15444 150 aa12.65□□□□□ -0.38
DDX55-201ENST00000238146 KIR2DL2P43627 348 aaPredicted RBP12.65□□□□□ -0.38
DDX55-201ENST00000238146 ATP1A1-AS1Q5TC04 95 aa12.65□□□□□ -0.38
DDX55-201ENST00000238146 STUMQ69YW2 141 aa12.65□□□□□ -0.38
DDX55-201ENST00000238146 UBALD2Q8IYN6 164 aa12.65□□□□□ -0.38
DDX55-201ENST00000238146 FER1L6-AS2Q96M78 137 aa12.65□□□□□ -0.38
DDX55-201ENST00000238146 MZT1Q08AG7 82 aa12.65□□□□□ -0.38
DDX55-201ENST00000238146 MSMPQ1L6U9 139 aa12.65□□□□□ -0.38
DDX55-201ENST00000238146 GDF5OSQ5U4N7 250 aa12.65□□□□□ -0.38
DDX55-201ENST00000238146 MORN5Q5VZ52 161 aa12.65□□□□□ -0.38
DDX55-201ENST00000238146 WIPF2Q8TF74 440 aaPredicted RBP12.65□□□□□ -0.38
DDX55-201ENST00000238146 ZNF257Q9Y2Q1 563 aa12.65□□□□□ -0.38
DDX55-201ENST00000238146 DSPP15924 2871 aaKnown RBP12.65□□□□□ -0.38
DDX55-201ENST00000238146 MUC3AQ02505 3323 aa12.65□□□□□ -0.39
DDX55-201ENST00000238146 TRAV5A0A0B4J249 113 aa12.65□□□□□ -0.39
DDX55-201ENST00000238146 IGLV1-44P01699 117 aa12.65□□□□□ -0.39
DDX55-201ENST00000238146 CFHR2P36980 270 aa12.65□□□□□ -0.39
DDX55-201ENST00000238146 HINT1P49773 126 aaPredicted RBP12.65□□□□□ -0.39
DDX55-201ENST00000238146 PMCHL1Q16048 86 aa12.65□□□□□ -0.39
DDX55-201ENST00000238146 Q6ZVH6 145 aa12.65□□□□□ -0.39
DDX55-201ENST00000238146 MBD6Q96DN6 1003 aa12.65□□□□□ -0.39
DDX55-201ENST00000238146 FAM167A-AS1Q96KT0 104 aa12.65□□□□□ -0.39
DDX55-201ENST00000238146 ZNF355PQ9NSJ1 428 aa12.65□□□□□ -0.39
DDX55-201ENST00000238146 MRPS16Q9Y3D3 137 aaKnown RBP12.65□□□□□ -0.39
DDX55-201ENST00000238146 HEATR1Q9H583 2144 aaKnown RBP12.64□□□□□ -0.39
DDX55-201ENST00000238146 IGHV1-18A0A0C4DH31 117 aa12.64□□□□□ -0.39
DDX55-201ENST00000238146 SRRM4A7MD48 611 aaKnown RBP12.64□□□□□ -0.39
DDX55-201ENST00000238146 UPK2O00526 184 aa12.64□□□□□ -0.39
DDX55-201ENST00000238146 MFAP2P55001 183 aa12.64□□□□□ -0.39
DDX55-201ENST00000238146 KBTBD11-OT1A0A1B0GTJ5 212 aa12.64□□□□□ -0.39
DDX55-201ENST00000238146 PTTG1IPP53801 180 aa12.64□□□□□ -0.39
DDX55-201ENST00000238146 C2orf83Q53S99 150 aa12.64□□□□□ -0.39
DDX55-201ENST00000238146 EBLN2Q6P2I7 272 aa12.64□□□□□ -0.39
DDX55-201ENST00000238146 RASL11AQ6T310 242 aa12.64□□□□□ -0.39
DDX55-201ENST00000238146 C1orf162Q8NEQ5 155 aaPredicted RBP12.64□□□□□ -0.39
DDX55-201ENST00000238146 ADTRPQ96IZ2 230 aa12.64□□□□□ -0.39
DDX55-201ENST00000238146 SLC25A2Q9BXI2 301 aa12.64□□□□□ -0.39
DDX55-201ENST00000238146 ASCL3Q9NQ33 180 aa12.64□□□□□ -0.39
DDX55-201ENST00000238146 ZDBF2Q9HCK1 2354 aa12.63□□□□□ -0.39
DDX55-201ENST00000238146 TEX50A0A1B0GTY4 177 aa12.63□□□□□ -0.39
DDX55-201ENST00000238146 PSMB11A5LHX3 300 aa12.63□□□□□ -0.39
DDX55-201ENST00000238146 HSBP1O75506 76 aa12.63□□□□□ -0.39
DDX55-201ENST00000238146 IGKV1-16P04430 117 aa12.63□□□□□ -0.39
DDX55-201ENST00000238146 UBE2L3P68036 154 aaKnown RBP12.63□□□□□ -0.39
DDX55-201ENST00000238146 FAM201AQ5SY85 155 aa12.63□□□□□ -0.39
DDX55-201ENST00000238146 UNQ5815/PRO19632Q6UWF5 114 aa12.63□□□□□ -0.39
DDX55-201ENST00000238146 TMEM178AQ8NBL3 297 aa12.63□□□□□ -0.39
DDX55-201ENST00000238146 NUP35Q8NFH5 326 aa12.63□□□□□ -0.39
DDX55-201ENST00000238146 IGHV2-26A0A0B4J1V2 119 aa12.63□□□□□ -0.39
DDX55-201ENST00000238146 FAM181BA6NEQ2 426 aa12.63□□□□□ -0.39
DDX55-201ENST00000238146 RNASE2P10153 161 aaKnown RBP12.63□□□□□ -0.39
DDX55-201ENST00000238146 MOGAT3Q86VF5 341 aa12.63□□□□□ -0.39
DDX55-201ENST00000238146 OR2V2Q96R30 315 aa12.63□□□□□ -0.39
DDX55-201ENST00000238146 COL6A3P12111 3177 aa12.63□□□□□ -0.39
DDX55-201ENST00000238146 CD69Q07108 199 aa12.62□□□□□ -0.39
DDX55-201ENST00000238146 FAM231DQ6ZW35 169 aa12.62□□□□□ -0.39
DDX55-201ENST00000238146 C9orf106Q8NAJ2 232 aa12.62□□□□□ -0.39
DDX55-201ENST00000238146 MRPL32Q9BYC8 188 aaKnown RBP12.62□□□□□ -0.39
DDX55-201ENST00000238146 AMMECR1Q9Y4X0 333 aaPredicted RBP12.62□□□□□ -0.39
DDX55-201ENST00000238146 TRAV9-2A0A087WT02 112 aa12.62□□□□□ -0.39
DDX55-201ENST00000238146 M0R2Z0 102 aa12.62□□□□□ -0.39
DDX55-201ENST00000238146 GNG10P50151 68 aa12.62□□□□□ -0.39
DDX55-201ENST00000238146 RPL8P62917 257 aaKnown RBP12.62□□□□□ -0.39
DDX55-201ENST00000238146 KLF5Q13887 457 aaPredicted RBP12.62□□□□□ -0.39
DDX55-201ENST00000238146 TBR1Q16650 682 aa12.62□□□□□ -0.39
DDX55-201ENST00000238146 Q56UQ5 140 aa12.62□□□□□ -0.39
DDX55-201ENST00000238146 DUX4L9Q6RFH8 374 aaPredicted RBP12.62□□□□□ -0.39
DDX55-201ENST00000238146 NUDT10Q8NFP7 164 aa12.62□□□□□ -0.39
DDX55-201ENST00000238146 OR10W1Q8NGF6 305 aa12.62□□□□□ -0.39
DDX55-201ENST00000238146 OR8B3Q8NGG8 313 aa12.62□□□□□ -0.39
DDX55-201ENST00000238146 SNRNP40Q96DI7 357 aaKnown RBP12.62□□□□□ -0.39
DDX55-201ENST00000238146 NUDT11Q96G61 164 aa12.62□□□□□ -0.39
DDX55-201ENST00000238146 OR8B2Q96RD0 313 aa12.62□□□□□ -0.39
DDX55-201ENST00000238146 TNFRSF19Q9NS68 423 aa12.62□□□□□ -0.39
DDX55-201ENST00000238146 TRIOBPQ9H2D6 2365 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 LHBP01229 141 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 GPR6P46095 362 aaPredicted RBP12.61□□□□□ -0.39
DDX55-201ENST00000238146 OR5B3Q8NH48 314 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 RNASE8Q8TDE3 154 aaKnown RBP12.61□□□□□ -0.39
DDX55-201ENST00000238146 ALKBH7Q9BT30 221 aaPredicted RBP12.61□□□□□ -0.39
DDX55-201ENST00000238146 BET1LQ9NYM9 111 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 DSCAMO60469 2012 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 PCNX2A6NKB5 2137 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 C2orf70A6NJV1 201 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 TOMM40O96008 361 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 CT45A6P0DMU7 189 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 CT45A5P0DMU8 189 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 CT45A7P0DMV0 189 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 IGLL1P15814 213 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 ATP5IP56385 69 aaPredicted RBP12.61□□□□□ -0.39
DDX55-201ENST00000238146 OR4F17Q8NGA8 305 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 OR1L8Q8NGR8 309 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 GRAMD2BQ96HH9 432 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 SSBP4Q9BWG4 385 aaPredicted RBP12.61□□□□□ -0.39
DDX55-201ENST00000238146 NCOR1P1Q9H4R4 102 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 SAP30LQ9HAJ7 183 aa12.61□□□□□ -0.39
DDX55-201ENST00000238146 COX11Q9Y6N1 276 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms