RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 C20orf173Q96LM9 149 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 LHFPL6Q9Y693 200 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 ARID1AO14497 2285 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 MED12Q93074 2177 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 VWC2LB2RUY7 222 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 OR2H2O95918 312 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 ZNF43P17038 809 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 PPP1R32Q7Z5V6 425 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 C20orf196Q8IYI0 205 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 APCDD1LQ8NCL9 501 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 RAB37Q96AX2 223 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 MRPS17Q9Y2R5 130 aaKnown RBP6.93□□□□□ -1.3
SPARC-201ENST00000231061 NSG2Q9Y328 171 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 TRIOO75962 3097 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 ZFHX2Q9C0A1 2572 aaPredicted RBP6.93□□□□□ -1.3
SPARC-201ENST00000231061 A0A0A6YYD4 124 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 TMEM14DPA8MWL7 114 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 CCL24O00175 119 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 PGLYRP1O75594 196 aaPredicted RBP6.93□□□□□ -1.3
SPARC-201ENST00000231061 TIAF1O95411 115 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 IFITM1P13164 125 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 CXCL12P48061 93 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 QRFPP83859 136 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 MIDNQ504T8 468 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 PPP1R27Q86WC6 154 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 EHFQ9NZC4 300 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 SPEGQ15772 3267 aa6.93□□□□□ -1.3
SPARC-201ENST00000231061 Q71RC1 249 aaPredicted RBP6.92□□□□□ -1.3
SPARC-201ENST00000231061 LYPD6Q86Y78 171 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 OR4F17Q8NGA8 305 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 TMEM171Q8WVE6 324 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 OR4F4Q96R69 305 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 DEPPQ9NTK1 212 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 GATA2P23769 480 aaPredicted RBP6.92□□□□□ -1.3
SPARC-201ENST00000231061 CYCSP99999 105 aaKnown RBP6.92□□□□□ -1.3
SPARC-201ENST00000231061 GAGE2BQ13066 116 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 GAGE2EQ4V326 116 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 OR5AS1Q8N127 324 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 KIR3DL3Q8N743 410 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 OR5AU1Q8NGC0 362 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 RTN4IP1Q8WWV3 396 aaPredicted RBP6.92□□□□□ -1.3
SPARC-201ENST00000231061 TMEM222Q9H0R3 208 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 JPT2Q9H910 190 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 SPANXA1Q9NS26 97 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 GAGE2DQ9UEU5 116 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 KLK5Q9Y337 293 aaPredicted RBP6.92□□□□□ -1.3
SPARC-201ENST00000231061 SCRG1O75711 98 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 CLDN17P56750 224 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 OR10A2Q9H208 303 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 NCKAP5O14513 1909 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 CACNA1HO95180 2353 aa6.92□□□□□ -1.3
SPARC-201ENST00000231061 OOSP1A8MZH6 123 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 MEOX1P50221 254 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 WFDC2Q14508 124 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 OR1C1Q15619 314 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 MRPL54Q6P161 138 aaKnown RBP6.91□□□□□ -1.3
SPARC-201ENST00000231061 MBD3L2Q8NHZ7 208 aaPredicted RBP6.91□□□□□ -1.3
SPARC-201ENST00000231061 DEFB126Q9BYW3 111 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 C5orf66Q9H5L9 145 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 F11RQ9Y624 299 aaKnown RBP6.91□□□□□ -1.3
SPARC-201ENST00000231061 MYO15AQ9UKN7 3530 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 CNOT1A5YKK6 2376 aaKnown RBP6.91□□□□□ -1.3
SPARC-201ENST00000231061 A0A087WWC5 75 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 SSX8Q7RTT4 187 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 ZNF695Q8IW36 515 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 SLC25A45Q8N413 288 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 SCGB3A2Q96PL1 93 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 SPANXB1Q9NS25 103 aaPredicted RBP6.91□□□□□ -1.3
SPARC-201ENST00000231061 CA2P00918 260 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 MT-ND6P03923 174 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 ZNF708P17019 499 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 UBE2NP61088 152 aaKnown RBP6.91□□□□□ -1.3
SPARC-201ENST00000231061 HES1Q14469 280 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 LIAT1Q6ZQX7 453 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 C10orf126Q8N4M7 172 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 NFAM1Q8NET5 270 aaPredicted RBP6.91□□□□□ -1.3
SPARC-201ENST00000231061 ARPC1AQ92747 370 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 TMEM230Q96A57 120 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 NMES1Q9C002 83 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 CDIP1Q9H305 208 aa6.91□□□□□ -1.3
SPARC-201ENST00000231061 IGHV3-15A0A0B4J1V0 119 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 LRRC30A6NM36 301 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 H0YIZ8 118 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 KBTBD11O94819 623 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 AMY1AP04745 511 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 CD40P25942 277 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 CDSNQ15517 529 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 RSPO4Q2I0M5 234 aaPredicted RBP6.9□□□□□ -1.3
SPARC-201ENST00000231061 LINC01559Q495D7 138 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 DEFB123Q8N688 67 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 OR2M3Q8NG83 312 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 C18orf15Q96N68 181 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 NIPSNAP3BQ9BS92 247 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 HES7Q9BYE0 225 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 FZR1Q9UM11 496 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 LAMA1P25391 3075 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 C5orf63A6NC05 138 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 CEACAM18A8MTB9 384 aa6.9□□□□□ -1.3
SPARC-201ENST00000231061 APOHP02749 345 aaPredicted RBP6.9□□□□□ -1.3
SPARC-201ENST00000231061 RBMXP38159 391 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms