RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 CASC10Q5T4H9 136 aa10.66□□□□□ -0.7
GPN3-201ENST00000228827 ZFAND6Q6FIF0 208 aa10.66□□□□□ -0.7
GPN3-201ENST00000228827 ZNF114Q8NC26 417 aa10.66□□□□□ -0.7
GPN3-201ENST00000228827 OR4C16Q8NGL9 310 aa10.66□□□□□ -0.7
GPN3-201ENST00000228827 DAZ1Q9NQZ3 744 aaKnown RBP10.66□□□□□ -0.7
GPN3-201ENST00000228827 C14orf166Q9Y224 244 aaKnown RBP10.66□□□□□ -0.7
GPN3-201ENST00000228827 STAB2Q8WWQ8 2551 aa10.65□□□□□ -0.7
GPN3-201ENST00000228827 A0A0G2JRQ6 117 aa10.65□□□□□ -0.7
GPN3-201ENST00000228827 TEX13DA0A0J9YY54 714 aaPredicted RBP10.65□□□□□ -0.7
GPN3-201ENST00000228827 YIF1AO95070 293 aa10.65□□□□□ -0.7
GPN3-201ENST00000228827 OR5AC1P0C628 307 aa10.65□□□□□ -0.7
GPN3-201ENST00000228827 UCP1P25874 307 aa10.65□□□□□ -0.7
GPN3-201ENST00000228827 ETV6P41212 452 aa10.65□□□□□ -0.7
GPN3-201ENST00000228827 MFAP4P55083 255 aa10.65□□□□□ -0.7
GPN3-201ENST00000228827 ISOC1Q96CN7 298 aa10.65□□□□□ -0.7
GPN3-201ENST00000228827 RRNAD1Q96FB5 475 aaKnown RBP10.65□□□□□ -0.7
GPN3-201ENST00000228827 ATP6V0BQ99437 205 aa10.65□□□□□ -0.7
GPN3-201ENST00000228827 RTBDNQ9BSG5 229 aaPredicted RBP10.65□□□□□ -0.7
GPN3-201ENST00000228827 PDCD10Q9BUL8 212 aa10.65□□□□□ -0.7
GPN3-201ENST00000228827 SLIRPQ9GZT3 109 aaKnown RBP10.65□□□□□ -0.7
GPN3-201ENST00000228827 HIPK2Q9H2X6 1198 aa10.65□□□□□ -0.7
GPN3-201ENST00000228827 EDA2RQ9HAV5 297 aa10.65□□□□□ -0.7
GPN3-201ENST00000228827 TRAV25A0A0B4J276 109 aa10.64□□□□□ -0.71
GPN3-201ENST00000228827 CTDSPLO15194 276 aa10.64□□□□□ -0.71
GPN3-201ENST00000228827 NUPL2O15504 423 aaKnown RBP10.64□□□□□ -0.71
GPN3-201ENST00000228827 SNCAP37840 140 aa10.64□□□□□ -0.71
GPN3-201ENST00000228827 HOXA1P49639 335 aaPredicted RBP10.64□□□□□ -0.71
GPN3-201ENST00000228827 ANKRD55Q3KP44 614 aa10.64□□□□□ -0.71
GPN3-201ENST00000228827 OR51S1Q8NGJ8 323 aa10.64□□□□□ -0.71
GPN3-201ENST00000228827 C5orf66Q9H5L9 145 aa10.64□□□□□ -0.71
GPN3-201ENST00000228827 NAA60Q9H7X0 242 aa10.64□□□□□ -0.71
GPN3-201ENST00000228827 UBQLN2Q9UHD9 624 aa10.64□□□□□ -0.71
GPN3-201ENST00000228827 DNAH7Q8WXX0 4024 aa10.63□□□□□ -0.71
GPN3-201ENST00000228827 IGHV3-49A0A0A0MS15 119 aa10.63□□□□□ -0.71
GPN3-201ENST00000228827 TNFSF8P32971 234 aa10.63□□□□□ -0.71
GPN3-201ENST00000228827 RELQ04864 619 aaPredicted RBP10.63□□□□□ -0.71
GPN3-201ENST00000228827 MCFD2Q8NI22 146 aa10.63□□□□□ -0.71
GPN3-201ENST00000228827 LHFPL5Q8TAF8 219 aa10.63□□□□□ -0.71
GPN3-201ENST00000228827 ZNF414Q96IQ9 312 aa10.63□□□□□ -0.71
GPN3-201ENST00000228827 TMEM222Q9H0R3 208 aa10.63□□□□□ -0.71
GPN3-201ENST00000228827 GAR1Q9NY12 217 aaKnown RBP10.63□□□□□ -0.71
GPN3-201ENST00000228827 RABL2AQ9UBK7 228 aaPredicted RBP10.63□□□□□ -0.71
GPN3-201ENST00000228827 RABL2BQ9UNT1 228 aa10.63□□□□□ -0.71
GPN3-201ENST00000228827 ANKRD20A5PA0PJZ0 165 aa10.62□□□□□ -0.71
GPN3-201ENST00000228827 FABP12A6NFH5 140 aa10.62□□□□□ -0.71
GPN3-201ENST00000228827 C15orf62A8K5M9 175 aa10.62□□□□□ -0.71
GPN3-201ENST00000228827 K7EMT4 169 aa10.62□□□□□ -0.71
GPN3-201ENST00000228827 GSTZ1O43708 216 aaPredicted RBP10.62□□□□□ -0.71
GPN3-201ENST00000228827 GNG7O60262 68 aa10.62□□□□□ -0.71
GPN3-201ENST00000228827 B3GALNT1O75752 331 aa10.62□□□□□ -0.71
GPN3-201ENST00000228827 SURF2Q15527 256 aaPredicted RBP10.62□□□□□ -0.71
GPN3-201ENST00000228827 LAMTOR1Q6IAA8 161 aa10.62□□□□□ -0.71
GPN3-201ENST00000228827 Q6ZRM9 215 aa10.62□□□□□ -0.71
GPN3-201ENST00000228827 TXN2Q99757 166 aa10.62□□□□□ -0.71
GPN3-201ENST00000228827 SPAG8Q99932 426 aaPredicted RBP10.62□□□□□ -0.71
GPN3-201ENST00000228827 ENY2Q9NPA8 101 aa10.62□□□□□ -0.71
GPN3-201ENST00000228827 RSL24D1Q9UHA3 163 aaKnown RBP10.62□□□□□ -0.71
GPN3-201ENST00000228827 GPR132Q9UNW8 380 aa10.62□□□□□ -0.71
GPN3-201ENST00000228827 IGHV3OR16-13A0A075B7E8 117 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 IGHV3-74A0A0B4J1X5 117 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 CCDC160A6NGH7 325 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 TSPAN4O14817 238 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 CDS2O95674 445 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 FCGR2BP31994 310 aaPredicted RBP10.61□□□□□ -0.71
GPN3-201ENST00000228827 TMEM268Q5VZI3 342 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 SELENOHQ8IZQ5 122 aaKnown RBP10.61□□□□□ -0.71
GPN3-201ENST00000228827 GLYATL2Q8WU03 294 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 PRRT1Q99946 306 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 GGTLC1Q9BX51 225 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 NXF2Q9GZY0 626 aaKnown RBP10.61□□□□□ -0.71
GPN3-201ENST00000228827 MCUBQ9NWR8 336 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 PRR13Q9NZ81 148 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 SMPXQ9UHP9 88 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 LOC102724200A0A096LPH7 203 aaPredicted RBP10.61□□□□□ -0.71
GPN3-201ENST00000228827 IGHV7-4-1A0A0J9YVY3 117 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 CRYM-AS1A6NIL9 109 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 RNASE2P10153 161 aaKnown RBP10.61□□□□□ -0.71
GPN3-201ENST00000228827 SUB1P53999 127 aaKnown RBP eCLIP10.61□□□□□ -0.71
GPN3-201ENST00000228827 DHODHQ02127 395 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 TMEM116Q8NCL8 245 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 DUSP18Q8NEJ0 188 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 RBPMSQ93062 196 aaKnown RBP10.61□□□□□ -0.71
GPN3-201ENST00000228827 GPR146Q96CH1 333 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 RNF2Q99496 336 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 SOSTQ9BQB4 213 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 RHPN1-AS1Q9BWJ2 59 aa10.61□□□□□ -0.71
GPN3-201ENST00000228827 TRAV14DV4A0A0A6YYC5 116 aa10.6□□□□□ -0.71
GPN3-201ENST00000228827 INS-IGF2F8WCM5 200 aa10.6□□□□□ -0.71
GPN3-201ENST00000228827 CHEK1O14757 476 aa10.6□□□□□ -0.71
GPN3-201ENST00000228827 NXPH3O95157 252 aa10.6□□□□□ -0.71
GPN3-201ENST00000228827 NPBWR1P48145 328 aa10.6□□□□□ -0.71
GPN3-201ENST00000228827 TFPI2P48307 235 aa10.6□□□□□ -0.71
GPN3-201ENST00000228827 FAM219AQ8IW50 185 aa10.6□□□□□ -0.71
GPN3-201ENST00000228827 TMEM230Q96A57 120 aa10.6□□□□□ -0.71
GPN3-201ENST00000228827 OR10C1Q96KK4 312 aa10.6□□□□□ -0.71
GPN3-201ENST00000228827 CACNG5Q9UF02 275 aa10.6□□□□□ -0.71
GPN3-201ENST00000228827 SCP2D1Q9UJQ7 156 aa10.6□□□□□ -0.71
GPN3-201ENST00000228827 IGKV3-7A0A075B6H7 116 aa10.59□□□□□ -0.71
GPN3-201ENST00000228827 OPRK1P41145 380 aa10.59□□□□□ -0.71
GPN3-201ENST00000228827 SPCS3P61009 180 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms