RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 KLF3P57682 345 aaPredicted RBP11.81□□□□□ -0.52
SFXN3-201ENST00000224807 CX3CL1P78423 397 aa11.81□□□□□ -0.52
SFXN3-201ENST00000224807 MUC21Q5SSG8 566 aa11.81□□□□□ -0.52
SFXN3-201ENST00000224807 LINC00596Q86U02 117 aa11.81□□□□□ -0.52
SFXN3-201ENST00000224807 NEUROG1Q92886 237 aa11.81□□□□□ -0.52
SFXN3-201ENST00000224807 SMPD2O60906 423 aa11.8□□□□□ -0.52
SFXN3-201ENST00000224807 PPOXP50336 477 aa11.8□□□□□ -0.52
SFXN3-201ENST00000224807 MRPL49Q13405 166 aaKnown RBP11.8□□□□□ -0.52
SFXN3-201ENST00000224807 SFXN3Q9BWM7 321 aa11.8□□□□□ -0.52
SFXN3-201ENST00000224807 ABI3Q9P2A4 366 aa11.8□□□□□ -0.52
SFXN3-201ENST00000224807 OR4C46A6NHA9 309 aa11.8□□□□□ -0.52
SFXN3-201ENST00000224807 Q0VG73 95 aa11.8□□□□□ -0.52
SFXN3-201ENST00000224807 IL11RAQ14626 422 aa11.8□□□□□ -0.52
SFXN3-201ENST00000224807 CDX2Q99626 313 aaPredicted RBP11.8□□□□□ -0.52
SFXN3-201ENST00000224807 GNB1LQ9BYB4 327 aa11.8□□□□□ -0.52
SFXN3-201ENST00000224807 SPTBN1Q01082 2364 aaKnown RBP11.8□□□□□ -0.52
SFXN3-201ENST00000224807 DMXL1Q9Y485 3027 aa11.8□□□□□ -0.52
SFXN3-201ENST00000224807 CYC1P08574 325 aa11.8□□□□□ -0.52
SFXN3-201ENST00000224807 FXYD7P58549 80 aa11.8□□□□□ -0.52
SFXN3-201ENST00000224807 PRB3Q04118 309 aaPredicted RBP11.8□□□□□ -0.52
SFXN3-201ENST00000224807 DUX4L9Q6RFH8 374 aaPredicted RBP11.8□□□□□ -0.52
SFXN3-201ENST00000224807 C1orf229Q6ZS94 237 aaPredicted RBP11.8□□□□□ -0.52
SFXN3-201ENST00000224807 TET2Q6N021 2002 aaPredicted RBP11.8□□□□□ -0.52
SFXN3-201ENST00000224807 FAM181BA6NEQ2 426 aa11.79□□□□□ -0.52
SFXN3-201ENST00000224807 WISP2O76076 250 aa11.79□□□□□ -0.52
SFXN3-201ENST00000224807 UBE2G1P62253 170 aa11.79□□□□□ -0.52
SFXN3-201ENST00000224807 WDR73Q6P4I2 378 aa11.79□□□□□ -0.52
SFXN3-201ENST00000224807 OR8B3Q8NGG8 313 aa11.79□□□□□ -0.52
SFXN3-201ENST00000224807 HIGD1CA8MV81 97 aa11.79□□□□□ -0.52
SFXN3-201ENST00000224807 REG1AP05451 166 aa11.79□□□□□ -0.52
SFXN3-201ENST00000224807 SPACA3Q8IXA5 215 aa11.79□□□□□ -0.52
SFXN3-201ENST00000224807 C1orf159Q96HA4 380 aa11.79□□□□□ -0.52
SFXN3-201ENST00000224807 TRIB1Q96RU8 372 aa11.79□□□□□ -0.52
SFXN3-201ENST00000224807 NPIPB11E5RHQ5 1161 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 P0C879 139 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 HOXC12P31275 282 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 SAPCD1Q5SSQ6 148 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 DCAF12Q5T6F0 453 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 WFDC8Q8IUA0 241 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 Q8IYB0 196 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 PGLYRP4Q96LB8 373 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 LSM4Q9Y4Z0 139 aaKnown RBP11.78□□□□□ -0.52
SFXN3-201ENST00000224807 ZNF891A8MT65 544 aaPredicted RBP11.78□□□□□ -0.52
SFXN3-201ENST00000224807 ORM2P19652 201 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 ZNF146Q15072 292 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 GDF5OSQ5U4N7 250 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 TMEM45BQ96B21 275 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 SNRNP40Q96DI7 357 aaKnown RBP11.78□□□□□ -0.52
SFXN3-201ENST00000224807 IGKV1OR2-108A0A075B7D4 117 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 J3QR06 171 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 HLA-DQA1P01909 254 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 SLC35E4Q6ICL7 350 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 CD177Q8N6Q3 437 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 BCL2L2Q92843 193 aaPredicted RBP11.78□□□□□ -0.52
SFXN3-201ENST00000224807 RAB37Q96AX2 223 aa11.78□□□□□ -0.52
SFXN3-201ENST00000224807 KLF13Q9Y2Y9 288 aaPredicted RBP11.78□□□□□ -0.52
SFXN3-201ENST00000224807 IGHV2OR16-5A0A0B4J2B6 119 aa11.77□□□□□ -0.53
SFXN3-201ENST00000224807 FBLL1A6NHQ2 334 aaKnown RBP11.77□□□□□ -0.53
SFXN3-201ENST00000224807 ISLRO14498 428 aa11.77□□□□□ -0.53
SFXN3-201ENST00000224807 SPRY3O43610 288 aa11.77□□□□□ -0.53
SFXN3-201ENST00000224807 SS18L1O75177 396 aaPredicted RBP11.77□□□□□ -0.53
SFXN3-201ENST00000224807 PRDX2P32119 198 aa11.77□□□□□ -0.53
SFXN3-201ENST00000224807 SSBP2P81877 361 aaPredicted RBP11.77□□□□□ -0.53
SFXN3-201ENST00000224807 AKAP6Q13023 2319 aa11.77□□□□□ -0.53
SFXN3-201ENST00000224807 ACP7Q6ZNF0 438 aa11.77□□□□□ -0.53
SFXN3-201ENST00000224807 FAM173AQ9BQD7 235 aa11.77□□□□□ -0.53
SFXN3-201ENST00000224807 TRAV9-2A0A087WT02 112 aa11.77□□□□□ -0.53
SFXN3-201ENST00000224807 TRGV10A0A0A0MS01 117 aa11.77□□□□□ -0.53
SFXN3-201ENST00000224807 PPIAL4DF5H284 164 aa11.77□□□□□ -0.53
SFXN3-201ENST00000224807 MEOX1P50221 254 aa11.77□□□□□ -0.53
SFXN3-201ENST00000224807 ERVK11-1P61568 191 aa11.77□□□□□ -0.53
SFXN3-201ENST00000224807 TM4SF20Q53R12 229 aa11.77□□□□□ -0.53
SFXN3-201ENST00000224807 WDR82Q6UXN9 313 aa11.77□□□□□ -0.53
SFXN3-201ENST00000224807 ORAOV1Q8WV07 137 aa11.77□□□□□ -0.53
SFXN3-201ENST00000224807 GOSR1O95249 250 aa11.76□□□□□ -0.53
SFXN3-201ENST00000224807 VWC2Q2TAL6 325 aa11.76□□□□□ -0.53
SFXN3-201ENST00000224807 NRN1LQ496H8 165 aa11.76□□□□□ -0.53
SFXN3-201ENST00000224807 SPRNQ5BIV9 151 aa11.76□□□□□ -0.53
SFXN3-201ENST00000224807 C10orf55Q5SWW7 151 aa11.76□□□□□ -0.53
SFXN3-201ENST00000224807 NUP35Q8NFH5 326 aa11.76□□□□□ -0.53
SFXN3-201ENST00000224807 RAB1CQ92928 201 aa11.76□□□□□ -0.53
SFXN3-201ENST00000224807 OR51B2Q9Y5P1 312 aa11.76□□□□□ -0.53
SFXN3-201ENST00000224807 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.76□□□□□ -0.53
SFXN3-201ENST00000224807 IGKV1-16P04430 117 aa11.76□□□□□ -0.53
SFXN3-201ENST00000224807 VDAC2P45880 294 aaPredicted RBP11.76□□□□□ -0.53
SFXN3-201ENST00000224807 FAM214BQ7L5A3 538 aa11.76□□□□□ -0.53
SFXN3-201ENST00000224807 ZBTB34Q8NCN2 500 aa11.76□□□□□ -0.53
SFXN3-201ENST00000224807 TNFRSF19Q9NS68 423 aa11.76□□□□□ -0.53
SFXN3-201ENST00000224807 AMMECR1Q9Y4X0 333 aaPredicted RBP11.76□□□□□ -0.53
SFXN3-201ENST00000224807 HILPDAQ9Y5L2 63 aa11.76□□□□□ -0.53
SFXN3-201ENST00000224807 MPDU1O75352 247 aa11.75□□□□□ -0.53
SFXN3-201ENST00000224807 TRIP6Q15654 476 aaKnown RBP11.75□□□□□ -0.53
SFXN3-201ENST00000224807 C19orf35Q6ZS72 473 aa11.75□□□□□ -0.53
SFXN3-201ENST00000224807 HSBP1L1C9JCN9 74 aa11.75□□□□□ -0.53
SFXN3-201ENST00000224807 SAP30O75446 220 aa11.75□□□□□ -0.53
SFXN3-201ENST00000224807 MT-ND6P03923 174 aa11.75□□□□□ -0.53
SFXN3-201ENST00000224807 SMIM21Q3B7S5 101 aa11.75□□□□□ -0.53
SFXN3-201ENST00000224807 MORN2Q502X0 79 aa11.75□□□□□ -0.53
SFXN3-201ENST00000224807 FLYWCH2Q96CP2 140 aaKnown RBP11.75□□□□□ -0.53
SFXN3-201ENST00000224807 GAL3ST2Q9H3Q3 398 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms