RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 IGHV2-26A0A0B4J1V2 119 aa15.34■□□□□ 0.05
CLIP2-201ENST00000223398 TMEM178BH3BS89 294 aa15.34■□□□□ 0.05
CLIP2-201ENST00000223398 TMEM200BQ69YZ2 307 aa15.34■□□□□ 0.05
CLIP2-201ENST00000223398 ZNF474Q6S9Z5 364 aaPredicted RBP15.34■□□□□ 0.05
CLIP2-201ENST00000223398 MBD3L4A6NDZ8 208 aaPredicted RBP15.33■□□□□ 0.05
CLIP2-201ENST00000223398 MBD3L3A6NE82 208 aaPredicted RBP15.33■□□□□ 0.05
CLIP2-201ENST00000223398 MBD3L5A6NJ08 208 aaPredicted RBP15.33■□□□□ 0.05
CLIP2-201ENST00000223398 MBD3L2Q8NHZ7 208 aaPredicted RBP15.33■□□□□ 0.05
CLIP2-201ENST00000223398 RCC1LQ96I51 464 aaKnown RBP15.33■□□□□ 0.05
CLIP2-201ENST00000223398 KIR2DL4Q99706 377 aa15.33■□□□□ 0.05
CLIP2-201ENST00000223398 HSPB9Q9BQS6 159 aa15.33■□□□□ 0.04
CLIP2-201ENST00000223398 M0R143 59 aa15.33■□□□□ 0.04
CLIP2-201ENST00000223398 ZNF525Q8N782 197 aa15.33■□□□□ 0.04
CLIP2-201ENST00000223398 RNASEH2CQ8TDP1 164 aaKnown RBP15.33■□□□□ 0.04
CLIP2-201ENST00000223398 TRAV20A0A0B4J274 112 aa15.33■□□□□ 0.04
CLIP2-201ENST00000223398 RNASE1P07998 156 aaKnown RBP15.33■□□□□ 0.04
CLIP2-201ENST00000223398 ZNF385CQ66K41 422 aaPredicted RBP15.33■□□□□ 0.04
CLIP2-201ENST00000223398 NR2C2APQ86WQ0 139 aa15.33■□□□□ 0.04
CLIP2-201ENST00000223398 TNFRSF18Q9Y5U5 241 aa15.33■□□□□ 0.04
CLIP2-201ENST00000223398 HLA-DQA1P01909 254 aa15.33■□□□□ 0.04
CLIP2-201ENST00000223398 MT-ND6P03923 174 aa15.33■□□□□ 0.04
CLIP2-201ENST00000223398 MYOD1P15172 320 aa15.33■□□□□ 0.04
CLIP2-201ENST00000223398 ABCA4P78363 2273 aa15.32■□□□□ 0.04
CLIP2-201ENST00000223398 SRRM5B3KS81 715 aa15.32■□□□□ 0.04
CLIP2-201ENST00000223398 PRSS2P07478 247 aa15.32■□□□□ 0.04
CLIP2-201ENST00000223398 SRIP30626 198 aa15.32■□□□□ 0.04
CLIP2-201ENST00000223398 CDC42EP3Q9UKI2 254 aa15.32■□□□□ 0.04
CLIP2-201ENST00000223398 H3BUX3 64 aa15.32■□□□□ 0.04
CLIP2-201ENST00000223398 LILRA1O75019 489 aa15.32■□□□□ 0.04
CLIP2-201ENST00000223398 COL8A2P25067 703 aa15.32■□□□□ 0.04
CLIP2-201ENST00000223398 GAS1P54826 345 aa15.32■□□□□ 0.04
CLIP2-201ENST00000223398 ZNF585BQ52M93 769 aa15.32■□□□□ 0.04
CLIP2-201ENST00000223398 RPRMLQ8N4K4 120 aa15.32■□□□□ 0.04
CLIP2-201ENST00000223398 VWA8A3KMH1 1905 aa15.32■□□□□ 0.04
CLIP2-201ENST00000223398 TCF24Q7RTU0 167 aa15.32■□□□□ 0.04
CLIP2-201ENST00000223398 LHFPL4Q7Z7J7 247 aa15.32■□□□□ 0.04
CLIP2-201ENST00000223398 GEMIN7Q9H840 131 aaKnown RBP15.32■□□□□ 0.04
CLIP2-201ENST00000223398 TRAV14DV4A0A0A6YYC5 116 aa15.31■□□□□ 0.04
CLIP2-201ENST00000223398 C5orf63A6NC05 138 aa15.31■□□□□ 0.04
CLIP2-201ENST00000223398 BPESC1Q9GZL8 116 aa15.31■□□□□ 0.04
CLIP2-201ENST00000223398 CD33P20138 364 aa15.31■□□□□ 0.04
CLIP2-201ENST00000223398 MEIG1Q5JSS6 88 aa15.31■□□□□ 0.04
CLIP2-201ENST00000223398 PSMG3Q9BT73 122 aaPredicted RBP15.31■□□□□ 0.04
CLIP2-201ENST00000223398 C15orf61A6NNL5 157 aa15.31■□□□□ 0.04
CLIP2-201ENST00000223398 FAM71F2Q6NXP2 309 aa15.31■□□□□ 0.04
CLIP2-201ENST00000223398 A0A0A6YYD4 124 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 RNF223E7ERA6 249 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 SAP30O75446 220 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 B3GALT5-AS1P59052 145 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 C10orf55Q5SWW7 151 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 PRSS33Q8NF86 280 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 OR10W1Q8NGF6 305 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 HIST1H2BAQ96A08 127 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 RAB37Q96AX2 223 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 SFRP2Q96HF1 295 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 IGKV1D-8A0A087WSZ0 117 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 DPRXA6NFQ7 191 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 SUMO2P61956 95 aaKnown RBP15.3■□□□□ 0.04
CLIP2-201ENST00000223398 CD177Q8N6Q3 437 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 TRAV41A0A0B4J266 112 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 PPP1R17O96001 155 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 OR9G9P0C7N8 305 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 IGHV1-8P0DP01 117 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 DEFB121Q5J5C9 76 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 PUSL1Q8N0Z8 303 aaKnown RBP15.3■□□□□ 0.04
CLIP2-201ENST00000223398 TMEM167AQ8TBQ9 72 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 FAM131CQ96AQ9 280 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 GGACTQ9BVM4 153 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 Q9H3A6 140 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 PSPNO60542 156 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 LEPROTL1O95214 131 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 CD55P08174 381 aa15.3■□□□□ 0.04
CLIP2-201ENST00000223398 FNDC1Q4ZHG4 1894 aaPredicted RBP15.3■□□□□ 0.04
CLIP2-201ENST00000223398 SCO2A0A1W2PP80 73 aa15.29■□□□□ 0.04
CLIP2-201ENST00000223398 IGHG3P01860 377 aa15.29■□□□□ 0.04
CLIP2-201ENST00000223398 KIF26BQ2KJY2 2108 aa15.29■□□□□ 0.04
CLIP2-201ENST00000223398 PEX7O00628 323 aa15.29■□□□□ 0.04
CLIP2-201ENST00000223398 DUTP33316 252 aaKnown RBP15.29■□□□□ 0.04
CLIP2-201ENST00000223398 FOXA3P55318 350 aaPredicted RBP15.29■□□□□ 0.04
CLIP2-201ENST00000223398 CACNG8Q8WXS5 425 aa15.29■□□□□ 0.04
CLIP2-201ENST00000223398 SDHCQ99643 169 aaPredicted RBP15.29■□□□□ 0.04
CLIP2-201ENST00000223398 SCN8AQ9UQD0 1980 aa15.29■□□□□ 0.04
CLIP2-201ENST00000223398 IGKV1-27A0A075B6S5 117 aa15.29■□□□□ 0.04
CLIP2-201ENST00000223398 F8VVB4 439 aa15.29■□□□□ 0.04
CLIP2-201ENST00000223398 F8VWA3 439 aa15.29■□□□□ 0.04
CLIP2-201ENST00000223398 RNF125Q96EQ8 232 aa15.29■□□□□ 0.04
CLIP2-201ENST00000223398 OR4D5Q8NGN0 318 aa15.28■□□□□ 0.04
CLIP2-201ENST00000223398 C7orf71A4D174 169 aa15.28■□□□□ 0.04
CLIP2-201ENST00000223398 ATP5G3P48201 142 aa15.28■□□□□ 0.04
CLIP2-201ENST00000223398 GNG5P63218 68 aa15.28■□□□□ 0.04
CLIP2-201ENST00000223398 GTSCR1Q86UQ5 136 aa15.28■□□□□ 0.04
CLIP2-201ENST00000223398 GPX4P36969 197 aaPredicted RBP15.28■□□□□ 0.04
CLIP2-201ENST00000223398 RPL24P83731 157 aaKnown RBP15.28■□□□□ 0.04
CLIP2-201ENST00000223398 TMEM8BA6NDV4 472 aa15.28■□□□□ 0.04
CLIP2-201ENST00000223398 Q71RC1 249 aaPredicted RBP15.28■□□□□ 0.04
CLIP2-201ENST00000223398 RPUSD1Q9UJJ7 312 aaKnown RBP15.28■□□□□ 0.04
CLIP2-201ENST00000223398 SLC17A3O00476 420 aa15.27■□□□□ 0.04
CLIP2-201ENST00000223398 LGALS3P17931 250 aaKnown RBP15.27■□□□□ 0.04
CLIP2-201ENST00000223398 ZNF324BQ6AW86 544 aaPredicted RBP15.27■□□□□ 0.04
CLIP2-201ENST00000223398 ADIPOQQ15848 244 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms