RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 S4R3C0 116 aa11.64□□□□□ -0.55
RPA3-201ENST00000223129 IAPPP10997 89 aa11.63□□□□□ -0.55
RPA3-201ENST00000223129 NKX2-1P43699 371 aaPredicted RBP11.63□□□□□ -0.55
RPA3-201ENST00000223129 DEFB136Q30KP8 78 aa11.63□□□□□ -0.55
RPA3-201ENST00000223129 GSG1LQ6UXU4 331 aa11.63□□□□□ -0.55
RPA3-201ENST00000223129 HIPK2Q9H2X6 1198 aa11.63□□□□□ -0.55
RPA3-201ENST00000223129 IGHV3-21A0A0B4J1V1 117 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 LINC00862A6NCI5 91 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 FAM90A26D6RGX4 464 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 TSC22D2O75157 780 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 RNASE2P10153 161 aaKnown RBP11.62□□□□□ -0.55
RPA3-201ENST00000223129 POLR2GP62487 172 aaKnown RBP eCLIP11.62□□□□□ -0.55
RPA3-201ENST00000223129 C15orf32Q32M92 178 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 CCDC28AQ8IWP9 274 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 ZNF114Q8NC26 417 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 NECAP1Q8NC96 275 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 OR1P1Q8NH06 330 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 C2orf50Q96LR7 162 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 DUX3Q96PT4 197 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 WRBO00258 174 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 SYNGR2O43760 224 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 IGHV3-23P01764 117 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 HIST1H1BP16401 226 aaKnown RBP11.62□□□□□ -0.55
RPA3-201ENST00000223129 ATP5G2Q06055 141 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 KLK9Q2XQG4 91 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 TEX261Q6UWH6 196 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 MISP3Q96FF7 219 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 WDR89Q96FK6 387 aaPredicted RBP11.62□□□□□ -0.55
RPA3-201ENST00000223129 USMG5Q96IX5 58 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 KLK9Q9UKQ9 250 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 U3KQ87 197 aa11.62□□□□□ -0.55
RPA3-201ENST00000223129 A0A0G2JLM5 398 aa11.61□□□□□ -0.55
RPA3-201ENST00000223129 FAM223BA6NKX1 122 aa11.61□□□□□ -0.55
RPA3-201ENST00000223129 I3L521 148 aa11.61□□□□□ -0.55
RPA3-201ENST00000223129 MBPP02686 304 aaPredicted RBP11.61□□□□□ -0.55
RPA3-201ENST00000223129 AP2S1P53680 142 aaPredicted RBP11.61□□□□□ -0.55
RPA3-201ENST00000223129 BSXQ3C1V8 233 aa11.61□□□□□ -0.55
RPA3-201ENST00000223129 FAM223AQ8IWN6 122 aa11.61□□□□□ -0.55
RPA3-201ENST00000223129 ZNF680Q8NEM1 530 aa11.61□□□□□ -0.55
RPA3-201ENST00000223129 SUN5Q8TC36 379 aa11.61□□□□□ -0.55
RPA3-201ENST00000223129 TMEM170AQ8WVE7 144 aa11.61□□□□□ -0.55
RPA3-201ENST00000223129 C4orf3Q8WVX3 66 aa11.61□□□□□ -0.55
RPA3-201ENST00000223129 MGAT4CQ9UBM8 478 aa11.61□□□□□ -0.55
RPA3-201ENST00000223129 MFSD2BA6NFX1 497 aa11.6□□□□□ -0.55
RPA3-201ENST00000223129 MED6O75586 246 aa11.6□□□□□ -0.55
RPA3-201ENST00000223129 TSPAN15O95858 294 aa11.6□□□□□ -0.55
RPA3-201ENST00000223129 H2BFSP57053 126 aa11.6□□□□□ -0.55
RPA3-201ENST00000223129 SLC24A4Q8NFF2 622 aa11.6□□□□□ -0.55
RPA3-201ENST00000223129 PINX1Q96BK5 328 aaKnown RBP11.6□□□□□ -0.55
RPA3-201ENST00000223129 THYN1Q9P016 225 aa11.6□□□□□ -0.55
RPA3-201ENST00000223129 TMA7Q9Y2S6 64 aaKnown RBP11.6□□□□□ -0.55
RPA3-201ENST00000223129 SSSCA1O60232 199 aa11.6□□□□□ -0.55
RPA3-201ENST00000223129 IFNA10P01566 189 aa11.6□□□□□ -0.55
RPA3-201ENST00000223129 IGHV3-48P01763 117 aa11.6□□□□□ -0.55
RPA3-201ENST00000223129 LGALS1P09382 135 aaKnown RBP11.6□□□□□ -0.55
RPA3-201ENST00000223129 CXCL3P19876 107 aa11.6□□□□□ -0.55
RPA3-201ENST00000223129 SUB1P53999 127 aaKnown RBP eCLIP11.6□□□□□ -0.553e-6■■■■■ 29.1
RPA3-201ENST00000223129 IL15RAQ13261 267 aa11.6□□□□□ -0.55
RPA3-201ENST00000223129 OR11H4Q8NGC9 324 aa11.6□□□□□ -0.55
RPA3-201ENST00000223129 OR1L6Q8NGR2 347 aa11.6□□□□□ -0.55
RPA3-201ENST00000223129 CYB5BO43169 146 aa11.59□□□□□ -0.55
RPA3-201ENST00000223129 TRBV12-3P01733 135 aa11.59□□□□□ -0.55
RPA3-201ENST00000223129 EXOSC2Q13868 293 aaKnown RBP11.59□□□□□ -0.55
RPA3-201ENST00000223129 MLANAQ16655 118 aa11.59□□□□□ -0.55
RPA3-201ENST00000223129 ZNF343Q6P1L6 599 aa11.59□□□□□ -0.55
RPA3-201ENST00000223129 OR11H1Q8NG94 326 aa11.59□□□□□ -0.55
RPA3-201ENST00000223129 RAX2Q96IS3 184 aa11.59□□□□□ -0.55
RPA3-201ENST00000223129 LSM5Q9Y4Y9 91 aaKnown RBP11.59□□□□□ -0.55
RPA3-201ENST00000223129 K7EIM0 57 aa11.59□□□□□ -0.55
RPA3-201ENST00000223129 M0QZ24 198 aa11.59□□□□□ -0.55
RPA3-201ENST00000223129 TMEM50AO95807 157 aa11.59□□□□□ -0.55
RPA3-201ENST00000223129 M6PRP20645 277 aa11.59□□□□□ -0.55
RPA3-201ENST00000223129 NPY1RP25929 384 aa11.59□□□□□ -0.55
RPA3-201ENST00000223129 C2orf83Q53S99 150 aa11.59□□□□□ -0.55
RPA3-201ENST00000223129 PVRIGQ6DKI7 326 aa11.59□□□□□ -0.55
RPA3-201ENST00000223129 SCARB1Q8WTV0 552 aa11.59□□□□□ -0.55
RPA3-201ENST00000223129 RCL1Q9Y2P8 373 aaKnown RBP11.59□□□□□ -0.55
RPA3-201ENST00000223129 H3BP45 60 aa11.58□□□□□ -0.56
RPA3-201ENST00000223129 I3L2K1 104 aa11.58□□□□□ -0.56
RPA3-201ENST00000223129 K7EPK0 472 aa11.58□□□□□ -0.56
RPA3-201ENST00000223129 MT-CO2P00403 227 aa11.58□□□□□ -0.56
RPA3-201ENST00000223129 IFNA7P01567 189 aa11.58□□□□□ -0.56
RPA3-201ENST00000223129 PAX9P55771 341 aa11.58□□□□□ -0.56
RPA3-201ENST00000223129 RAB32Q13637 225 aa11.58□□□□□ -0.56
RPA3-201ENST00000223129 ETV3LQ6ZN32 361 aa11.58□□□□□ -0.56
RPA3-201ENST00000223129 OR4F17Q8NGA8 305 aa11.58□□□□□ -0.56
RPA3-201ENST00000223129 CIB3Q96Q77 187 aaPredicted RBP11.58□□□□□ -0.56
RPA3-201ENST00000223129 OR4F4Q96R69 305 aa11.58□□□□□ -0.56
RPA3-201ENST00000223129 IGHV4OR15-8A0A075B7B6 117 aa11.57□□□□□ -0.56
RPA3-201ENST00000223129 A0A087WW49 117 aa11.57□□□□□ -0.56
RPA3-201ENST00000223129 CCL24O00175 119 aa11.57□□□□□ -0.56
RPA3-201ENST00000223129 S100A10P60903 97 aa11.57□□□□□ -0.56
RPA3-201ENST00000223129 RUNX1Q01196 453 aa11.57□□□□□ -0.56
RPA3-201ENST00000223129 LGALSLQ3ZCW2 172 aaPredicted RBP11.57□□□□□ -0.56
RPA3-201ENST00000223129 SPANXN5Q5MJ07 72 aa11.57□□□□□ -0.56
RPA3-201ENST00000223129 CLEC19AQ6UXS0 136 aa11.57□□□□□ -0.56
RPA3-201ENST00000223129 OR1N2Q8NGR9 330 aa11.57□□□□□ -0.56
RPA3-201ENST00000223129 EEF1AKMT3Q96AZ1 226 aa11.57□□□□□ -0.56
RPA3-201ENST00000223129 CXorf58Q96LI9 332 aa11.57□□□□□ -0.56
RPA3-201ENST00000223129 CCDC140Q96MF4 163 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms