RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 H1FXQ92522 213 aaKnown RBP18.03■□□□□ 0.48
CCDC9-201ENST00000221922 MRPL20Q9BYC9 149 aaKnown RBP18.03■□□□□ 0.48
CCDC9-201ENST00000221922 IL36BQ9NZH7 164 aa18.03■□□□□ 0.48
CCDC9-201ENST00000221922 SLC45A2Q9UMX9 530 aa18.03■□□□□ 0.48
CCDC9-201ENST00000221922 SRRM4A7MD48 611 aaKnown RBP18.03■□□□□ 0.48
CCDC9-201ENST00000221922 IQCJQ1A5X6 159 aa18.03■□□□□ 0.48
CCDC9-201ENST00000221922 LBHQ53QV2 105 aaPredicted RBP18.03■□□□□ 0.48
CCDC9-201ENST00000221922 BEND2Q8NDZ0 799 aa18.03■□□□□ 0.48
CCDC9-201ENST00000221922 OR4P4Q8NGL7 312 aa18.03■□□□□ 0.48
CCDC9-201ENST00000221922 NDUFAF3Q9BU61 184 aa18.03■□□□□ 0.48
CCDC9-201ENST00000221922 ZNRD1Q9P1U0 126 aa18.03■□□□□ 0.48
CCDC9-201ENST00000221922 KAAG1Q9UBP8 84 aa18.03■□□□□ 0.48
CCDC9-201ENST00000221922 PIEZO1Q92508 2521 aa18.03■□□□□ 0.48
CCDC9-201ENST00000221922 B9A039 149 aa18.02■□□□□ 0.48
CCDC9-201ENST00000221922 SAA1P0DJI8 122 aaPredicted RBP18.02■□□□□ 0.48
CCDC9-201ENST00000221922 MYOD1P15172 320 aa18.02■□□□□ 0.48
CCDC9-201ENST00000221922 SELENOTP62341 195 aa18.02■□□□□ 0.48
CCDC9-201ENST00000221922 TMEM256Q8N2U0 113 aa18.02■□□□□ 0.48
CCDC9-201ENST00000221922 LINC00311Q8N616 119 aa18.02■□□□□ 0.48
CCDC9-201ENST00000221922 OR5AN1Q8NGI8 311 aa18.02■□□□□ 0.48
CCDC9-201ENST00000221922 TEX50A0A1B0GTY4 177 aa18.02■□□□□ 0.47
CCDC9-201ENST00000221922 H0YJW9 148 aa18.02■□□□□ 0.47
CCDC9-201ENST00000221922 FCN3O75636 299 aa18.02■□□□□ 0.47
CCDC9-201ENST00000221922 HNF1AP20823 631 aa18.02■□□□□ 0.47
CCDC9-201ENST00000221922 ADMP35318 185 aa18.02■□□□□ 0.47
CCDC9-201ENST00000221922 HLA-DRB5Q30154 266 aa18.02■□□□□ 0.47
CCDC9-201ENST00000221922 ZNF596Q8TC21 504 aa18.02■□□□□ 0.47
CCDC9-201ENST00000221922 HARBI1Q96MB7 349 aa18.02■□□□□ 0.47
CCDC9-201ENST00000221922 IGF2RP11717 2491 aa18.01■□□□□ 0.47
CCDC9-201ENST00000221922 CCL21O00585 134 aa18.01■□□□□ 0.47
CCDC9-201ENST00000221922 SSX2Q16385 188 aa18.01■□□□□ 0.47
CCDC9-201ENST00000221922 TMEM177Q53S58 311 aa18.01■□□□□ 0.47
CCDC9-201ENST00000221922 MIR17HGQ75NE6 70 aa18.01■□□□□ 0.47
CCDC9-201ENST00000221922 OR10X1Q8NGY0 326 aa18.01■□□□□ 0.47
CCDC9-201ENST00000221922 EAF1Q96JC9 268 aaPredicted RBP18.01■□□□□ 0.47
CCDC9-201ENST00000221922 POLEQ07864 2286 aa18.01■□□□□ 0.47
CCDC9-201ENST00000221922 FAM90A27PA6NNH2 459 aa18■□□□□ 0.47
CCDC9-201ENST00000221922 COL8A2P25067 703 aa18■□□□□ 0.47
CCDC9-201ENST00000221922 RAB4BP61018 213 aa18■□□□□ 0.47
CCDC9-201ENST00000221922 C2orf83Q53S99 150 aa18■□□□□ 0.47
CCDC9-201ENST00000221922 LYPD2Q6UXB3 125 aa18■□□□□ 0.47
CCDC9-201ENST00000221922 TMEM186Q96B77 213 aa18■□□□□ 0.47
CCDC9-201ENST00000221922 C2orf88Q9BSF0 95 aa18■□□□□ 0.47
CCDC9-201ENST00000221922 A0A1B0GV90 55 aa18■□□□□ 0.47
CCDC9-201ENST00000221922 NUPR1O60356 82 aa18■□□□□ 0.47
CCDC9-201ENST00000221922 ZNF90Q03938 601 aa18■□□□□ 0.47
CCDC9-201ENST00000221922 OR1L8Q8NGR8 309 aa18■□□□□ 0.47
CCDC9-201ENST00000221922 TNCP24821 2201 aa18■□□□□ 0.47
CCDC9-201ENST00000221922 ROS1P08922 2347 aa17.99■□□□□ 0.47
CCDC9-201ENST00000221922 A0A1B0GUS0 222 aa17.99■□□□□ 0.47
CCDC9-201ENST00000221922 PDPNQ86YL7 162 aa17.99■□□□□ 0.47
CCDC9-201ENST00000221922 FLYWCH2Q96CP2 140 aaKnown RBP17.99■□□□□ 0.47
CCDC9-201ENST00000221922 NABP2Q9BQ15 211 aa17.99■□□□□ 0.47
CCDC9-201ENST00000221922 TMEM167BQ9NRX6 74 aa17.99■□□□□ 0.47
CCDC9-201ENST00000221922 LGALS4P56470 323 aa17.99■□□□□ 0.47
CCDC9-201ENST00000221922 SSTP61278 116 aa17.99■□□□□ 0.47
CCDC9-201ENST00000221922 OR4C13Q8NGP0 309 aa17.99■□□□□ 0.47
CCDC9-201ENST00000221922 OR4A5Q8NH83 315 aa17.99■□□□□ 0.47
CCDC9-201ENST00000221922 VSTM2AQ8TAG5 236 aa17.99■□□□□ 0.47
CCDC9-201ENST00000221922 LINC01560Q8TB33 94 aa17.99■□□□□ 0.47
CCDC9-201ENST00000221922 SLC35E1Q96K37 410 aa17.99■□□□□ 0.47
CCDC9-201ENST00000221922 CTSZQ9UBR2 303 aa17.99■□□□□ 0.47
CCDC9-201ENST00000221922 IGHV1-69-2A0A0G2JMI3 117 aa17.98■□□□□ 0.47
CCDC9-201ENST00000221922 SLC17A3O00476 420 aa17.98■□□□□ 0.47
CCDC9-201ENST00000221922 USF1P22415 310 aaPredicted RBP17.98■□□□□ 0.47
CCDC9-201ENST00000221922 LOXP28300 417 aaPredicted RBP17.98■□□□□ 0.47
CCDC9-201ENST00000221922 PNKDQ8N490 385 aa17.98■□□□□ 0.47
CCDC9-201ENST00000221922 COMMD5Q9GZQ3 224 aa17.98■□□□□ 0.47
CCDC9-201ENST00000221922 ARFGEF3Q5TH69 2177 aa17.98■□□□□ 0.47
CCDC9-201ENST00000221922 IGKV1OR2-108A0A075B7D4 117 aa17.97■□□□□ 0.47
CCDC9-201ENST00000221922 RPL8P62917 257 aaKnown RBP17.97■□□□□ 0.47
CCDC9-201ENST00000221922 C19orf24Q9BVV8 132 aa17.97■□□□□ 0.47
CCDC9-201ENST00000221922 TECRQ9NZ01 308 aaKnown RBP17.97■□□□□ 0.47
CCDC9-201ENST00000221922 ACTL6BO94805 426 aa17.97■□□□□ 0.47
CCDC9-201ENST00000221922 DLX6P56179 175 aa17.97■□□□□ 0.47
CCDC9-201ENST00000221922 TAS2R60P59551 318 aa17.97■□□□□ 0.47
CCDC9-201ENST00000221922 PSG5Q15238 335 aa17.97■□□□□ 0.47
CCDC9-201ENST00000221922 TMEM155Q4W5P6 130 aa17.97■□□□□ 0.47
CCDC9-201ENST00000221922 V9GYV3 84 aa17.97■□□□□ 0.47
CCDC9-201ENST00000221922 INS-IGF2F8WCM5 200 aa17.96■□□□□ 0.47
CCDC9-201ENST00000221922 PLAUP00749 431 aa17.96■□□□□ 0.47
CCDC9-201ENST00000221922 OR10J4P0C629 311 aa17.96■□□□□ 0.47
CCDC9-201ENST00000221922 RNASE2P10153 161 aaKnown RBP17.96■□□□□ 0.47
CCDC9-201ENST00000221922 ESDP10768 282 aa17.96■□□□□ 0.47
CCDC9-201ENST00000221922 CBLN1P23435 193 aa17.96■□□□□ 0.47
CCDC9-201ENST00000221922 ZNF137PP52743 207 aa17.96■□□□□ 0.47
CCDC9-201ENST00000221922 ERHP84090 104 aaKnown RBP17.96■□□□□ 0.47
CCDC9-201ENST00000221922 OR9G1Q8NH87 305 aa17.96■□□□□ 0.47
CCDC9-201ENST00000221922 ZNF503Q96F45 646 aa17.96■□□□□ 0.47
CCDC9-201ENST00000221922 MS4A10Q96PG2 267 aa17.96■□□□□ 0.47
CCDC9-201ENST00000221922 NDUFA4L2Q9NRX3 87 aa17.96■□□□□ 0.47
CCDC9-201ENST00000221922 TP53TG3Q9ULZ0 132 aa17.96■□□□□ 0.47
CCDC9-201ENST00000221922 RPEL1Q2QD12 228 aa17.95■□□□□ 0.46
CCDC9-201ENST00000221922 PQLC2Q6ZP29 291 aa17.95■□□□□ 0.46
CCDC9-201ENST00000221922 MOB3BQ86TA1 216 aa17.95■□□□□ 0.46
CCDC9-201ENST00000221922 TMEM167AQ8TBQ9 72 aa17.95■□□□□ 0.46
CCDC9-201ENST00000221922 FAM122AQ96E09 287 aa17.95■□□□□ 0.46
CCDC9-201ENST00000221922 MISP3Q96FF7 219 aa17.95■□□□□ 0.46
CCDC9-201ENST00000221922 WASHC3Q9Y3C0 194 aa17.95■□□□□ 0.46
CCDC9-201ENST00000221922 PKDREJQ9NTG1 2253 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms