RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 OVOL3O00110 214 aa23.79■■□□□ 1.4
PABPN1-201ENST00000216727 PDE6DO43924 150 aa23.79■■□□□ 1.4
PABPN1-201ENST00000216727 VENTXO95231 258 aa23.79■■□□□ 1.4
PABPN1-201ENST00000216727 FAM24BQ8N5W8 94 aa23.79■■□□□ 1.4
PABPN1-201ENST00000216727 OR2T6Q8NHC8 308 aa23.79■■□□□ 1.4
PABPN1-201ENST00000216727 ACACBO00763 2458 aa23.79■■□□□ 1.4
PABPN1-201ENST00000216727 GOSR1O95249 250 aa23.79■■□□□ 1.4
PABPN1-201ENST00000216727 ZFP36P26651 326 aaKnown RBP23.79■■□□□ 1.4
PABPN1-201ENST00000216727 PARLQ9H300 379 aa23.79■■□□□ 1.4
PABPN1-201ENST00000216727 TMEM242Q9NWH2 141 aa23.79■■□□□ 1.4
PABPN1-201ENST00000216727 NAV3Q8IVL0 2385 aa23.79■■□□□ 1.4
PABPN1-201ENST00000216727 MT-CO2P00403 227 aa23.78■■□□□ 1.4
PABPN1-201ENST00000216727 TMEM241Q24JQ0 296 aa23.78■■□□□ 1.4
PABPN1-201ENST00000216727 CFHR4Q92496 578 aa23.78■■□□□ 1.4
PABPN1-201ENST00000216727 RPUSD4Q96CM3 377 aaKnown RBP23.78■■□□□ 1.4
PABPN1-201ENST00000216727 KLRD1Q13241 179 aa23.77■■□□□ 1.4
PABPN1-201ENST00000216727 SPATA31B1PQ5VZV4 182 aa23.77■■□□□ 1.4
PABPN1-201ENST00000216727 ACY3Q96HD9 319 aa23.77■■□□□ 1.4
PABPN1-201ENST00000216727 FUT9Q9Y231 359 aa23.77■■□□□ 1.4
PABPN1-201ENST00000216727 GCHFRP30047 84 aa23.77■■□□□ 1.4
PABPN1-201ENST00000216727 FAM78BQ5VT40 261 aa23.77■■□□□ 1.4
PABPN1-201ENST00000216727 FBXL15Q9H469 300 aa23.77■■□□□ 1.4
PABPN1-201ENST00000216727 PLXNB1O43157 2135 aa23.77■■□□□ 1.4
PABPN1-201ENST00000216727 IGSF10Q6WRI0 2623 aa23.77■■□□□ 1.39
PABPN1-201ENST00000216727 RAB5AP20339 215 aa23.76■■□□□ 1.39
PABPN1-201ENST00000216727 ZNF674Q2M3X9 581 aa23.76■■□□□ 1.39
PABPN1-201ENST00000216727 REG1AP05451 166 aa23.76■■□□□ 1.39
PABPN1-201ENST00000216727 UBE2G2P60604 165 aa23.76■■□□□ 1.39
PABPN1-201ENST00000216727 PAX2Q02962 417 aa23.76■■□□□ 1.39
PABPN1-201ENST00000216727 ETFRF1Q6IPR1 90 aa23.76■■□□□ 1.39
PABPN1-201ENST00000216727 F6UZH7 168 aa23.75■■□□□ 1.39
PABPN1-201ENST00000216727 CLN5O75503 358 aa23.75■■□□□ 1.39
PABPN1-201ENST00000216727 CST9LP1Q5W188 147 aa23.75■■□□□ 1.39
PABPN1-201ENST00000216727 VMO1Q7Z5L0 202 aa23.75■■□□□ 1.39
PABPN1-201ENST00000216727 THAP8Q8NA92 274 aa23.75■■□□□ 1.39
PABPN1-201ENST00000216727 PRELID1Q9Y255 219 aa23.75■■□□□ 1.39
PABPN1-201ENST00000216727 HILPDAQ9Y5L2 63 aa23.75■■□□□ 1.39
PABPN1-201ENST00000216727 CRYGCP07315 174 aa23.74■■□□□ 1.39
PABPN1-201ENST00000216727 OR5G3P0C626 314 aa23.74■■□□□ 1.39
PABPN1-201ENST00000216727 ATP5G3P48201 142 aa23.74■■□□□ 1.39
PABPN1-201ENST00000216727 LHFPL4Q7Z7J7 247 aa23.74■■□□□ 1.39
PABPN1-201ENST00000216727 OR1P1Q8NH06 330 aa23.74■■□□□ 1.39
PABPN1-201ENST00000216727 MALSU1Q96EH3 234 aa23.74■■□□□ 1.39
PABPN1-201ENST00000216727 TACC2O95359 2948 aa23.74■■□□□ 1.39
PABPN1-201ENST00000216727 TEX22C9J3V5 150 aa23.74■■□□□ 1.39
PABPN1-201ENST00000216727 AREGP15514 252 aa23.74■■□□□ 1.39
PABPN1-201ENST00000216727 NPPCP23582 126 aa23.74■■□□□ 1.39
PABPN1-201ENST00000216727 GATA2P23769 480 aaPredicted RBP23.74■■□□□ 1.39
PABPN1-201ENST00000216727 SSBP2P81877 361 aaPredicted RBP23.74■■□□□ 1.39
PABPN1-201ENST00000216727 GNB1P62873 340 aa23.73■■□□□ 1.39
PABPN1-201ENST00000216727 MIR17HGQ75NE6 70 aa23.73■■□□□ 1.39
PABPN1-201ENST00000216727 NPIPB3Q92617 1050 aa23.73■■□□□ 1.39
PABPN1-201ENST00000216727 SRSF8Q9BRL6 282 aaKnown RBP23.73■■□□□ 1.39
PABPN1-201ENST00000216727 OOSP1A8MZH6 123 aa23.72■■□□□ 1.39
PABPN1-201ENST00000216727 CTDSP1Q9GZU7 261 aa23.72■■□□□ 1.39
PABPN1-201ENST00000216727 CORTO00230 105 aa23.72■■□□□ 1.39
PABPN1-201ENST00000216727 MOSP00540 346 aa23.72■■□□□ 1.39
PABPN1-201ENST00000216727 MFAP2P55001 183 aa23.72■■□□□ 1.39
PABPN1-201ENST00000216727 MINOS1Q5TGZ0 78 aa23.72■■□□□ 1.39
PABPN1-201ENST00000216727 CCDC144NLQ6NUI1 221 aa23.72■■□□□ 1.39
PABPN1-201ENST00000216727 NPBQ8NG41 125 aa23.72■■□□□ 1.39
PABPN1-201ENST00000216727 SRSF12Q8WXF0 261 aaKnown RBP23.72■■□□□ 1.39
PABPN1-201ENST00000216727 SIRPDQ9H106 197 aa23.72■■□□□ 1.39
PABPN1-201ENST00000216727 TECRQ9NZ01 308 aaKnown RBP23.72■■□□□ 1.39
PABPN1-201ENST00000216727 MINOS1-NBL1R4GNA1 71 aa23.72■■□□□ 1.39
PABPN1-201ENST00000216727 ARL2-SNX15V9GYD0 113 aa23.72■■□□□ 1.39
PABPN1-201ENST00000216727 TCRBV4S1A1TA0A5B7 111 aa23.71■■□□□ 1.39
PABPN1-201ENST00000216727 FOXH1O75593 365 aa23.71■■□□□ 1.39
PABPN1-201ENST00000216727 RPL23P62829 140 aaKnown RBP23.71■■□□□ 1.39
PABPN1-201ENST00000216727 PLGLAQ15195 96 aa23.71■■□□□ 1.39
PABPN1-201ENST00000216727 ELOBQ15370 118 aa23.71■■□□□ 1.39
PABPN1-201ENST00000216727 MMDQ15546 238 aa23.71■■□□□ 1.39
PABPN1-201ENST00000216727 IGFBPL1Q8WX77 278 aa23.71■■□□□ 1.39
PABPN1-201ENST00000216727 IGKV1D-37A0A075B6S9 117 aa23.71■■□□□ 1.39
PABPN1-201ENST00000216727 IGHV2-70DA0A0C4DH43 119 aa23.71■■□□□ 1.39
PABPN1-201ENST00000216727 PSMB11A5LHX3 300 aa23.71■■□□□ 1.39
PABPN1-201ENST00000216727 FCN1O00602 326 aa23.71■■□□□ 1.39
PABPN1-201ENST00000216727 NBR2O15453 112 aa23.71■■□□□ 1.39
PABPN1-201ENST00000216727 HOXB4P17483 251 aaPredicted RBP23.71■■□□□ 1.39
PABPN1-201ENST00000216727 RAB5BP61020 215 aa23.71■■□□□ 1.39
PABPN1-201ENST00000216727 SELENOTP62341 195 aa23.71■■□□□ 1.39
PABPN1-201ENST00000216727 OR51G1Q8NGK1 321 aa23.71■■□□□ 1.39
PABPN1-201ENST00000216727 RNF2Q99496 336 aa23.71■■□□□ 1.39
PABPN1-201ENST00000216727 BPESC1Q9GZL8 116 aa23.71■■□□□ 1.39
PABPN1-201ENST00000216727 F11RQ9Y624 299 aaKnown RBP23.71■■□□□ 1.39
PABPN1-201ENST00000216727 C1orf196B1AJZ1 125 aa23.7■■□□□ 1.38
PABPN1-201ENST00000216727 CLDN34H7C241 214 aa23.7■■□□□ 1.38
PABPN1-201ENST00000216727 NDUFA3O95167 84 aa23.7■■□□□ 1.38
PABPN1-201ENST00000216727 RND2P52198 227 aa23.7■■□□□ 1.38
PABPN1-201ENST00000216727 LMO4P61968 165 aa23.7■■□□□ 1.38
PABPN1-201ENST00000216727 ADIRFQ15847 76 aa23.7■■□□□ 1.38
PABPN1-201ENST00000216727 MRPL32Q9BYC8 188 aaKnown RBP23.7■■□□□ 1.38
PABPN1-201ENST00000216727 TAS2R45P59539 299 aa23.69■■□□□ 1.38
PABPN1-201ENST00000216727 LCN2P80188 198 aa23.69■■□□□ 1.38
PABPN1-201ENST00000216727 PQLC2Q6ZP29 291 aa23.69■■□□□ 1.38
PABPN1-201ENST00000216727 TMEM37Q8WXS4 190 aa23.69■■□□□ 1.38
PABPN1-201ENST00000216727 TMEM167BQ9NRX6 74 aa23.69■■□□□ 1.38
PABPN1-201ENST00000216727 MRPL36Q9P0J6 103 aaKnown RBP23.69■■□□□ 1.38
PABPN1-201ENST00000216727 DOK5Q9P104 306 aa23.69■■□□□ 1.38
PABPN1-201ENST00000216727 MISP3Q96FF7 219 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms