RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 LCN15Q6UWW0 184 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 SEC11CQ9BY50 192 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 EIF5A2Q9GZV4 153 aaKnown RBP12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 FNDC4Q9H6D8 234 aaPredicted RBP12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 BEX4Q9NWD9 120 aaPredicted RBP12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 CARHSP1Q9Y2V2 147 aaKnown RBP12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 CSMD1Q96PZ7 3565 aa12.42□□□□□ -0.42
LAPTM4A-201ENST00000175091 HELZ2Q9BYK8 2649 aaKnown RBP12.42□□□□□ -0.42
LAPTM4A-201ENST00000175091 B4DSR2 109 aa12.42□□□□□ -0.42
LAPTM4A-201ENST00000175091 SEC14L6B5MCN3 397 aa12.42□□□□□ -0.42
LAPTM4A-201ENST00000175091 TMEM11P17152 192 aa12.42□□□□□ -0.42
LAPTM4A-201ENST00000175091 MFAP2P55001 183 aa12.42□□□□□ -0.42
LAPTM4A-201ENST00000175091 PEA15Q15121 130 aa12.42□□□□□ -0.42
LAPTM4A-201ENST00000175091 MIC13Q5XKP0 118 aa12.42□□□□□ -0.42
LAPTM4A-201ENST00000175091 OR1P1Q8NH06 330 aa12.42□□□□□ -0.42
LAPTM4A-201ENST00000175091 SMDT1Q9H4I9 107 aa12.42□□□□□ -0.42
LAPTM4A-201ENST00000175091 NAV2Q8IVL1 2488 aa12.42□□□□□ -0.42
LAPTM4A-201ENST00000175091 ZFHX3Q15911 3703 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 IGHV1-69DA0A0B4J2H0 117 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 F8W036 122 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 IGHV1-69P01742 117 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 APELAP0DMC3 54 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 DEFA4P12838 97 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 RPL29P47914 159 aaKnown RBP12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 PRR20EP86478 221 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 PRR20CP86479 221 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 PRR20DP86480 221 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 PRR20BP86481 221 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 PRR20AP86496 221 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 RAB31Q13636 194 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 GCSAMLQ5JQS6 135 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 LRRC75A-AS1Q8N1F1 130 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 STPG3Q8N7X2 389 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 SSMEM1Q8WWF3 244 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 SLC35E1Q96K37 410 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 F11RQ9Y624 299 aaKnown RBP12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 RBFOX3A6NFN3 312 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 FAM106CPP0CH98 169 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 BRS3P32247 399 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 CDC34P49427 236 aaPredicted RBP12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 FGF8P55075 233 aaPredicted RBP12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 B2MP61769 119 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 MLANAQ16655 118 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 DEFB113Q30KQ7 82 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 RUSC1-AS1Q66K80 236 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 FAM122CQ6P4D5 195 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 C19orf35Q6ZS72 473 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 ACTR3CQ9C0K3 210 aaPredicted RBP12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 SLC39A9Q9NUM3 307 aa12.41□□□□□ -0.42
LAPTM4A-201ENST00000175091 CORTO00230 105 aa12.4□□□□□ -0.42
LAPTM4A-201ENST00000175091 CYB5BO43169 146 aa12.4□□□□□ -0.42
LAPTM4A-201ENST00000175091 EIF3GO75821 320 aaKnown RBP eCLIP12.4□□□□□ -0.42
LAPTM4A-201ENST00000175091 SCO1O75880 301 aa12.4□□□□□ -0.42
LAPTM4A-201ENST00000175091 CNIH1O95406 144 aa12.4□□□□□ -0.42
LAPTM4A-201ENST00000175091 PPT1P50897 306 aa12.4□□□□□ -0.42
LAPTM4A-201ENST00000175091 ZNF506Q5JVG8 444 aa12.4□□□□□ -0.42
LAPTM4A-201ENST00000175091 FAM120AOSQ5T036 256 aa12.4□□□□□ -0.42
LAPTM4A-201ENST00000175091 RAB24Q969Q5 203 aa12.4□□□□□ -0.42
LAPTM4A-201ENST00000175091 RARRES2Q99969 163 aa12.4□□□□□ -0.42
LAPTM4A-201ENST00000175091 SLC45A2Q9UMX9 530 aa12.4□□□□□ -0.42
LAPTM4A-201ENST00000175091 CR1P17927 2039 aa12.39□□□□□ -0.43
LAPTM4A-201ENST00000175091 TRAV20A0A0B4J274 112 aa12.39□□□□□ -0.43
LAPTM4A-201ENST00000175091 CRYGCP07315 174 aa12.39□□□□□ -0.43
LAPTM4A-201ENST00000175091 PMS2P11Q13670 270 aa12.39□□□□□ -0.43
LAPTM4A-201ENST00000175091 ICAM4Q14773 271 aa12.39□□□□□ -0.43
LAPTM4A-201ENST00000175091 FXYD3Q14802 87 aa12.39□□□□□ -0.43
LAPTM4A-201ENST00000175091 HAGHQ16775 308 aa12.39□□□□□ -0.43
LAPTM4A-201ENST00000175091 OR2T6Q8NHC8 308 aa12.39□□□□□ -0.43
LAPTM4A-201ENST00000175091 HIF1ANQ9NWT6 349 aa12.39□□□□□ -0.43
LAPTM4A-201ENST00000175091 DMRT1Q9Y5R6 373 aa12.39□□□□□ -0.43
LAPTM4A-201ENST00000175091 IGHV3OR16-10A0A075B7F0 116 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 LOC102723971A0A1B0GUV8 181 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 NCBP2LA6PVI3 153 aaKnown RBP12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 IGHV4-38-2P0DP08 117 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 BCL2P10415 239 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 CTRB1P17538 263 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 GATA3P23771 443 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 NDPQ00604 133 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 GUCA2BQ16661 112 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 CTRB2Q6GPI1 263 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 ZNF562Q6V9R5 426 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 Q8N9W7 124 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 ACY3Q96HD9 319 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 C7orf69Q9H7B7 122 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 C1RLQ9NZP8 487 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 GNG13Q9P2W3 67 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 HMGB3O15347 200 aaKnown RBP12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 LINC00869P0C866 280 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 OR10J1P30954 320 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 CX3CL1P78423 397 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 DEFA5Q01523 94 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 KHDC3LQ587J8 217 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 ETFRF1Q6IPR1 90 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 BRD3OSQ6XYD6 125 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 SVBPQ8N300 66 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 THAP8Q8NA92 274 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 ABHD5Q8WTS1 349 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 ARPC1AQ92747 370 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 MISP3Q96FF7 219 aa12.38□□□□□ -0.43
LAPTM4A-201ENST00000175091 PSMG3-AS1Q96PY0 264 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms