RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Ccl1P10146 92 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Rtp3Q5QGU6 474 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Utf1Q6J1H4 339 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gng10Q9CXP8 68 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 FcrlsQ9EQY5 509 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr1264Q9R0K2 308 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 PatjQ63ZW7 1834 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Clpsl2Q3UW21 102 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Adgrg5Q3V3Z3 524 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr1437Q7TQR7 312 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 ClmQ7TSN2 230 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Ppp1r14dQ7TT52 146 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Kcnmb2Q9CZM9 235 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr934Q9EQ87 310 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Arid1aA2BH40 2283 aaKnown RBP12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 A730046J19RikA0A1B0GSN8 89 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gm4787B2RUD9 748 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr978E9Q985 311 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Ccdc188F6WEU2 249 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gm20830J3KML6 227 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 1700009N14RikQ14AA6 216 aaKnown RBP12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Prss57Q14B24 284 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Psg16Q8K0U8 395 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr802Q8VGJ2 312 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Zfc3h1B2RT41 1992 aaKnown RBP12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Trbv29A0A0G2LB96 114 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr1220F7BL62 311 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Sult2a4L7N245 285 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 P01803 113 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Arg1Q61176 323 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Dll1Q61483 722 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Tmem255aQ8BHW5 351 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr355Q8VFP6 310 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Acp1Q9D358 158 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr715bE9Q725 315 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gm20877J3QPZ4 227 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 CiartQ3TQ03 375 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Trav8d-1Q5R1H8 112 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 1700034E13RikQ9D2T6 108 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gpr34Q9R1K6 375 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Spink14B9EJP9 96 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Cd209gD3Z5D4 194 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Mcpt9O35164 246 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Grem1O70326 184 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 SelenopP70274 380 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Prss45Q8K4I7 317 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Slc6a8Q8VBW1 640 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Chst5Q9QUP4 395 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Bcl2l10Q9Z0F3 191 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Slc25a20Q9Z2Z6 301 aaKnown RBP12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 KcpQ3U492 1550 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Myo7aP97479 2215 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Vsig10l2A0A140LHF2 776 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Alox12bO70582 701 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 P01822 137 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Slc45a2P58355 530 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Pdlim4P70271 330 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr93Q6UAH1 312 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr1204Q7TR10 309 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Prodh2Q8VCZ9 456 aa12.88□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Dcaf10A2AKB9 566 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 P18529 117 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 PpicP30412 212 aaKnown RBP12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Rps4xP62702 263 aaKnown RBP12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 St3gal2Q11204 350 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr1260Q8VGN9 310 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Q9CX63 252 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Sgms2Q9D4B1 365 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Chst1Q9EQC0 411 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Ybx2Q9Z2C8 360 aaKnown RBP12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Lilra6A0A0B4J1F3 663 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gm21981D3Z6Q6 369 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gm10097J3KMK7 105 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Bmpr1bP36898 502 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 FusP56959 518 aaKnown RBP12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Mdga2P60755 949 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Megf9Q8BH27 600 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Sirt7Q8BKJ9 402 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Rbfox2Q8BP71 449 aaKnown RBP12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 C1saQ8CG14 688 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Fbxo24Q9D417 589 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Wnt2bO70283 389 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 TcapO70548 167 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 G430049J08RikQ3TL09 166 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 NtmQ99PJ0 344 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Ramp3Q9WUP1 147 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Trav5-4A0A075B652 114 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Fcgr4A0A0B4J1G0 249 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gm10799F7C7U2 104 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Tcl1b1P56840 116 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Bex6Q3TZW7 114 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Ankrd33bQ3U0L2 486 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Zfp941Q3URY5 674 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr147Q60886 317 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Prss35Q8C0F9 409 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 GpnmbQ99P91 574 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Ap5s1Q9D742 170 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Tspan32Q9JHH2 256 aa12.87□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Fgf12P61329 243 aa12.86□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 GgnQ80WJ1 673 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms