RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	TP53TG5	Q9Y2B4	290 aa		13.71	□□□□□ -0.22
PHGDH-223	ENST00000641597	MDFIC2	A0A1B0GVS7	189 aa		13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	TYMS	P04818	313 aa		13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	DDT	P30046	118 aa		13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	CISD2	Q8N5K1	135 aa	Known RBP	13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	OR10J1	P30954	320 aa		13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	ADM	P35318	185 aa		13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	KIR2DS2	P43631	304 aa		13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	CNN1	P51911	297 aa	Known RBP	13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	RHOB	P62745	196 aa		13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	SLC35B1	P78383	322 aa		13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	COA6	Q5JTJ3	125 aa	Known RBP	13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	LYPD2	Q6UXB3	125 aa		13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	SLC25A48	Q6ZT89	311 aa	Known RBP	13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	C1orf174	Q8IYL3	243 aa		13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	OR2T6	Q8NHC8	308 aa		13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	NEUROG1	Q92886	237 aa		13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597	NABP2	Q9BQ15	211 aa		13.7	□□□□□ -0.22
PHGDH-223	ENST00000641597		A0A087X0M5	115 aa		13.69	□□□□□ -0.22
PHGDH-223	ENST00000641597	TRAV5	A0A0B4J249	113 aa		13.69	□□□□□ -0.22
PHGDH-223	ENST00000641597		A0A0G2JNJ9	132 aa		13.69	□□□□□ -0.22
PHGDH-223	ENST00000641597		A0A1B0GX30	115 aa		13.69	□□□□□ -0.22
PHGDH-223	ENST00000641597	DPRX	A6NFQ7	191 aa		13.69	□□□□□ -0.22
PHGDH-223	ENST00000641597	UPK2	O00526	184 aa		13.69	□□□□□ -0.22
PHGDH-223	ENST00000641597	CRYBB3	P26998	211 aa		13.69	□□□□□ -0.22
PHGDH-223	ENST00000641597	LGALS4	P56470	323 aa		13.69	□□□□□ -0.22
PHGDH-223	ENST00000641597	TMEM249	Q2WGJ8	235 aa		13.69	□□□□□ -0.22
PHGDH-223	ENST00000641597	IGFL3	Q6UXB1	125 aa		13.69	□□□□□ -0.22
PHGDH-223	ENST00000641597		Q9UFV3	132 aa		13.69	□□□□□ -0.22
PHGDH-223	ENST00000641597	DOLPP1	Q86YN1	238 aa		13.69	□□□□□ -0.22
PHGDH-223	ENST00000641597	CCL17	Q92583	94 aa		13.69	□□□□□ -0.22
PHGDH-223	ENST00000641597		F2Z2F3	143 aa		13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	RPL29	P47914	159 aa	Known RBP	13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	PDLIM4	P50479	330 aa		13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	SELENOV	P59797	346 aa		13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	BSPH1	Q075Z2	132 aa		13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	ADIPOQ	Q15848	244 aa		13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	MRPL41	Q8IXM3	137 aa	Known RBP	13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	OR10G8	Q8NGN5	311 aa		13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	H1FX	Q92522	213 aa	Known RBP	13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	SLC25A10	Q9UBX3	287 aa	Predicted RBP	13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	SLC45A2	Q9UMX9	530 aa		13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	OR7C2	O60412	319 aa		13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	APELA	P0DMC3	54 aa		13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	CEACAM8	P31997	349 aa	Predicted RBP	13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	PRCD	Q00LT1	54 aa		13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	FXYD3	Q14802	87 aa		13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	LINC00469	Q8N7U9	141 aa		13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	NHLRC2	Q8NBF2	726 aa		13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	ACY3	Q96HD9	319 aa		13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	RITA1	Q96K30	269 aa		13.68	□□□□□ -0.22
PHGDH-223	ENST00000641597	PKIA	P61925	76 aa		13.67	□□□□□ -0.22
PHGDH-223	ENST00000641597	RUSC1-AS1	Q66K80	236 aa		13.67	□□□□□ -0.22
PHGDH-223	ENST00000641597	C19orf35	Q6ZS72	473 aa		13.67	□□□□□ -0.22
PHGDH-223	ENST00000641597	RNASE7	Q9H1E1	156 aa	Known RBP	13.67	□□□□□ -0.22
PHGDH-223	ENST00000641597	ZMAT5	Q9UDW3	170 aa	Known RBP	13.67	□□□□□ -0.22
PHGDH-223	ENST00000641597		A0A1B0GV90	55 aa		13.67	□□□□□ -0.22
PHGDH-223	ENST00000641597	DVL1	O14640	695 aa		13.67	□□□□□ -0.22
PHGDH-223	ENST00000641597	IRF2	P14316	349 aa		13.67	□□□□□ -0.22
PHGDH-223	ENST00000641597	LCN2	P80188	198 aa		13.67	□□□□□ -0.22
PHGDH-223	ENST00000641597	ZNF90	Q03938	601 aa		13.67	□□□□□ -0.22
PHGDH-223	ENST00000641597	FOXL1	Q12952	345 aa		13.67	□□□□□ -0.22
PHGDH-223	ENST00000641597	SSX2	Q16385	188 aa		13.67	□□□□□ -0.22
PHGDH-223	ENST00000641597	TMEM200B	Q69YZ2	307 aa		13.67	□□□□□ -0.22
PHGDH-223	ENST00000641597	LINC00479	Q96M42	142 aa		13.67	□□□□□ -0.22
PHGDH-223	ENST00000641597	HARBI1	Q96MB7	349 aa		13.67	□□□□□ -0.22
PHGDH-223	ENST00000641597	GGTLC3	B5MD39	225 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	REG1A	P05451	166 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	KRTCAP3	Q53RY4	240 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	PRR30	Q53SZ7	412 aa	Predicted RBP	13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	LURAP1L	Q8IV03	231 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	FAM57A	Q8TBR7	257 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	UHRF2	Q96PU4	802 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	SFXN3	Q9BWM7	321 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	TPSG1	Q9NRR2	321 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	TP53TG3	Q9ULZ0	132 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	IGHV3-72	A0A0B4J1Y9	119 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	ITGB1BP1	O14713	200 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	THBD	P07204	575 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	RNASE2	P10153	161 aa	Known RBP	13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	CD99	P14209	185 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	TCL1A	P56279	114 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	RTL8B	Q17RB0	113 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	CENPW	Q5EE01	88 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	PQLC2	Q6ZP29	291 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	GBGT1	Q8N5D6	347 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	EAF1	Q96JC9	268 aa	Predicted RBP	13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	MRPL36	Q9P0J6	103 aa	Known RBP	13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	PRND	Q9UKY0	176 aa		13.66	□□□□□ -0.22
PHGDH-223	ENST00000641597	ATRX	P46100	2492 aa		13.65	□□□□□ -0.22
PHGDH-223	ENST00000641597	RAB31	Q13636	194 aa		13.65	□□□□□ -0.22
PHGDH-223	ENST00000641597	PRR31	Q5SQ13	230 aa		13.65	□□□□□ -0.22
PHGDH-223	ENST00000641597	OR5R1	Q8NH85	324 aa		13.65	□□□□□ -0.22
PHGDH-223	ENST00000641597	TSTD3	H0UI37	97 aa		13.65	□□□□□ -0.22
PHGDH-223	ENST00000641597	TNFSF4	P23510	183 aa		13.65	□□□□□ -0.22
PHGDH-223	ENST00000641597	LINC00310	P59036	64 aa		13.65	□□□□□ -0.22
PHGDH-223	ENST00000641597	ERVFC1-1	P60608	527 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms