RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 LINC00299Q6ZSB3 139 aa20.45■□□□□ 0.86
VEGFA-231ENST00000640499 AURKAIP1Q9NWT8 199 aaPredicted RBP20.45■□□□□ 0.86
VEGFA-231ENST00000640499 ATG12O94817 140 aa20.44■□□□□ 0.86
VEGFA-231ENST00000640499 SPINK9Q5DT21 86 aa20.44■□□□□ 0.86
VEGFA-231ENST00000640499 TMED4Q7Z7H5 227 aa20.44■□□□□ 0.86
VEGFA-231ENST00000640499 OR2C3Q8N628 320 aa20.44■□□□□ 0.86
VEGFA-231ENST00000640499 KCNIP3Q9Y2W7 256 aa20.44■□□□□ 0.86
VEGFA-231ENST00000640499 F11RQ9Y624 299 aaKnown RBP20.44■□□□□ 0.86
VEGFA-231ENST00000640499 ZP3P21754 424 aa20.43■□□□□ 0.86
VEGFA-231ENST00000640499 AARDQ4LEZ3 155 aa20.43■□□□□ 0.86
VEGFA-231ENST00000640499 ACSM6Q6P461 480 aa20.43■□□□□ 0.86
VEGFA-231ENST00000640499 RRNAD1Q96FB5 475 aaKnown RBP20.43■□□□□ 0.86
VEGFA-231ENST00000640499 NAP1L6A6NFF2 107 aa20.42■□□□□ 0.86
VEGFA-231ENST00000640499 PPP5D1E7EU14 171 aa20.42■□□□□ 0.86
VEGFA-231ENST00000640499 INPP1P49441 399 aa20.42■□□□□ 0.86
VEGFA-231ENST00000640499 C9orf66Q5T8R8 295 aa20.42■□□□□ 0.86
VEGFA-231ENST00000640499 IL34Q6ZMJ4 242 aa20.42■□□□□ 0.86
VEGFA-231ENST00000640499 SLC35G3Q8N808 338 aa20.42■□□□□ 0.86
VEGFA-231ENST00000640499 IL22RA2Q969J5 263 aa20.42■□□□□ 0.86
VEGFA-231ENST00000640499 GPR61Q9BZJ8 451 aa20.42■□□□□ 0.86
VEGFA-231ENST00000640499 NDUFB6O95139 128 aa20.41■□□□□ 0.86
VEGFA-231ENST00000640499 MECP2P51608 486 aaKnown RBP20.41■□□□□ 0.86
VEGFA-231ENST00000640499 PDLIM3Q53GG5 364 aaPredicted RBP20.41■□□□□ 0.86
VEGFA-231ENST00000640499 TMEM128Q5BJH2 165 aa20.41■□□□□ 0.86
VEGFA-231ENST00000640499 SLC25A24Q6NUK1 477 aa20.41■□□□□ 0.86
VEGFA-231ENST00000640499 LYZL2Q7Z4W2 148 aa20.41■□□□□ 0.86
VEGFA-231ENST00000640499 FAM219AQ8IW50 185 aa20.41■□□□□ 0.86
VEGFA-231ENST00000640499 BATF3Q9NR55 127 aa20.41■□□□□ 0.86
VEGFA-231ENST00000640499 PTTG2Q9NZH5 202 aa20.41■□□□□ 0.86
VEGFA-231ENST00000640499 FLVCR2Q9UPI3 526 aa20.41■□□□□ 0.86
VEGFA-231ENST00000640499 HLA-AP01891 365 aaKnown RBP20.4■□□□□ 0.86
VEGFA-231ENST00000640499 SYNJ2BPP57105 145 aa20.4■□□□□ 0.86
VEGFA-231ENST00000640499 RBMS2Q15434 407 aaKnown RBP20.4■□□□□ 0.86
VEGFA-231ENST00000640499 ANKRD55Q3KP44 614 aa20.4■□□□□ 0.86
VEGFA-231ENST00000640499 CLEC19AQ6UXS0 136 aa20.4■□□□□ 0.86
VEGFA-231ENST00000640499 ZNF502Q8TBZ5 544 aa20.4■□□□□ 0.86
VEGFA-231ENST00000640499 CACNG5Q9UF02 275 aa20.4■□□□□ 0.86
VEGFA-231ENST00000640499 INS-IGF2F8WCM5 200 aa20.39■□□□□ 0.85
VEGFA-231ENST00000640499 PPP1R1AQ13522 171 aa20.39■□□□□ 0.85
VEGFA-231ENST00000640499 NMSQ5H8A3 153 aa20.39■□□□□ 0.85
VEGFA-231ENST00000640499 ZNF114Q8NC26 417 aa20.39■□□□□ 0.85
VEGFA-231ENST00000640499 RNASE11Q8TAA1 199 aaKnown RBP20.39■□□□□ 0.85
VEGFA-231ENST00000640499 EEF1AKMT3Q96AZ1 226 aa20.39■□□□□ 0.85
VEGFA-231ENST00000640499 WI2-2373I1.2A0A1W2PRP0 233 aa20.38■□□□□ 0.85
VEGFA-231ENST00000640499 K7EIM0 57 aa20.38■□□□□ 0.85
VEGFA-231ENST00000640499 OR1P1Q8NH06 330 aa20.38■□□□□ 0.85
VEGFA-231ENST00000640499 C7orf50Q9BRJ6 194 aaKnown RBP20.38■□□□□ 0.85
VEGFA-231ENST00000640499 PLEKHA3Q9HB20 300 aa20.38■□□□□ 0.85
VEGFA-231ENST00000640499 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.38■□□□□ 0.85
VEGFA-231ENST00000640499 IGHV3-21A0A0B4J1V1 117 aa20.37■□□□□ 0.85
VEGFA-231ENST00000640499 A0A0B4J2A0 478 aa20.37■□□□□ 0.85
VEGFA-231ENST00000640499 SFT2D2O95562 160 aa20.37■□□□□ 0.85
VEGFA-231ENST00000640499 IFNA17P01571 189 aa20.37■□□□□ 0.85
VEGFA-231ENST00000640499 CLEC3BP05452 202 aa20.37■□□□□ 0.85
VEGFA-231ENST00000640499 RPEL1Q2QD12 228 aa20.37■□□□□ 0.85
VEGFA-231ENST00000640499 CENPSQ8N2Z9 138 aa20.37■□□□□ 0.85
VEGFA-231ENST00000640499 VN1R17PQ8TDU5 208 aa20.37■□□□□ 0.85
VEGFA-231ENST00000640499 CXorf58Q96LI9 332 aa20.37■□□□□ 0.85
VEGFA-231ENST00000640499 CCDC32Q9BV29 185 aa20.37■□□□□ 0.85
VEGFA-231ENST00000640499 SHPKQ9UHJ6 478 aa20.37■□□□□ 0.85
VEGFA-231ENST00000640499 TRBV7-1A0A0A6YYK4 115 aa20.36■□□□□ 0.85
VEGFA-231ENST00000640499 F8W735 103 aaPredicted RBP20.36■□□□□ 0.85
VEGFA-231ENST00000640499 K7EIL1 84 aa20.36■□□□□ 0.85
VEGFA-231ENST00000640499 OR2C1O95371 312 aa20.36■□□□□ 0.85
VEGFA-231ENST00000640499 PVRIGQ6DKI7 326 aa20.36■□□□□ 0.85
VEGFA-231ENST00000640499 LGI3Q8N145 548 aa20.36■□□□□ 0.85
VEGFA-231ENST00000640499 OR52E5Q8NH55 327 aa20.36■□□□□ 0.85
VEGFA-231ENST00000640499 SCARB1Q8WTV0 552 aa20.36■□□□□ 0.85
VEGFA-231ENST00000640499 THYN1Q9P016 225 aa20.36■□□□□ 0.85
VEGFA-231ENST00000640499 I3L2K1 104 aa20.35■□□□□ 0.85
VEGFA-231ENST00000640499 SAP30O75446 220 aa20.35■□□□□ 0.85
VEGFA-231ENST00000640499 ANXA3P12429 323 aa20.35■□□□□ 0.85
VEGFA-231ENST00000640499 VAMP1P23763 118 aa20.35■□□□□ 0.85
VEGFA-231ENST00000640499 C11orf87Q6NUJ2 197 aa20.35■□□□□ 0.85
VEGFA-231ENST00000640499 LRTM2Q8N967 370 aa20.35■□□□□ 0.85
VEGFA-231ENST00000640499 OR9G4Q8NGQ1 327 aa20.35■□□□□ 0.85
VEGFA-231ENST00000640499 S100ZQ8WXG8 99 aa20.35■□□□□ 0.85
VEGFA-231ENST00000640499 CENPXA8MT69 81 aa20.34■□□□□ 0.85
VEGFA-231ENST00000640499 LYRM1O43325 122 aa20.34■□□□□ 0.85
VEGFA-231ENST00000640499 GGCTO75223 188 aaKnown RBP20.34■□□□□ 0.85
VEGFA-231ENST00000640499 ARL3P36405 182 aa20.34■□□□□ 0.85
VEGFA-231ENST00000640499 INSL3P51460 131 aa20.34■□□□□ 0.85
VEGFA-231ENST00000640499 SPCS3P61009 180 aa20.34■□□□□ 0.85
VEGFA-231ENST00000640499 ERHP84090 104 aaKnown RBP20.34■□□□□ 0.85
VEGFA-231ENST00000640499 FAM209BQ5JX69 171 aa20.34■□□□□ 0.85
VEGFA-231ENST00000640499 ADAMTSL5Q6ZMM2 481 aa20.34■□□□□ 0.85
VEGFA-231ENST00000640499 REC114Q7Z4M0 266 aa20.34■□□□□ 0.85
VEGFA-231ENST00000640499 HAPLN4Q86UW8 402 aa20.34■□□□□ 0.85
VEGFA-231ENST00000640499 ZC4H2Q9NQZ6 224 aa20.34■□□□□ 0.85
VEGFA-231ENST00000640499 CSN3P07498 182 aa20.33■□□□□ 0.85
VEGFA-231ENST00000640499 RNASE2P10153 161 aaKnown RBP20.33■□□□□ 0.85
VEGFA-231ENST00000640499 SRPXP78539 464 aa20.33■□□□□ 0.85
VEGFA-231ENST00000640499 BSXQ3C1V8 233 aa20.33■□□□□ 0.85
VEGFA-231ENST00000640499 OR1L6Q8NGR2 347 aa20.33■□□□□ 0.85
VEGFA-231ENST00000640499 ZNF414Q96IQ9 312 aa20.33■□□□□ 0.85
VEGFA-231ENST00000640499 CYB5BO43169 146 aa20.32■□□□□ 0.84
VEGFA-231ENST00000640499 SULT1A3P0DMM9 295 aa20.32■□□□□ 0.84
VEGFA-231ENST00000640499 SULT1A4P0DMN0 295 aa20.32■□□□□ 0.84
VEGFA-231ENST00000640499 EDN2P20800 178 aa20.32■□□□□ 0.84
VEGFA-231ENST00000640499 GPR183P32249 361 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms