RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 ZNF506Q5JVG8 444 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 TMEM170BQ5T4T1 132 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 LINC00114Q6XXX2 140 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 GGACTQ9BVM4 153 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 TMEM136Q6ZRR5 245 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 JMJD8Q96S16 334 aa12.38□□□□□ -0.43
HNRNPU-226ENST00000640218 CCL3L1P16619 93 aa12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 UCP1P25874 307 aa12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 PEX7O00628 323 aa12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 MEF2CQ06413 473 aaPredicted RBP12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 OR52E5Q8NH55 327 aa12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 WNT10AQ9GZT5 417 aa12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 ARHGEF17Q96PE2 2063 aaPredicted RBP12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 TMEM250H0YL14 139 aa12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 GATA2P23769 480 aaPredicted RBP12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 TMEM101Q96IK0 257 aa12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 LINC00312Q9Y6C7 94 aa12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 PQLC2LA1A4F0 135 aa12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 J3QKU1 62 aa12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 IGHV3-11P01762 117 aa12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 PAPPA-AS1Q5QFB9 102 aa12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 SDHCQ99643 169 aaPredicted RBP12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 PLSCR2Q9NRY7 297 aa12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 MRPS18CQ9Y3D5 142 aaKnown RBP12.37□□□□□ -0.43
HNRNPU-226ENST00000640218 RNASE4P34096 147 aaKnown RBP12.36□□□□□ -0.43
HNRNPU-226ENST00000640218 CDX1P47902 265 aaPredicted RBP12.36□□□□□ -0.43
HNRNPU-226ENST00000640218 MRAP2Q96G30 205 aa12.36□□□□□ -0.43
HNRNPU-226ENST00000640218 KCNS1Q96KK3 526 aa12.36□□□□□ -0.43
HNRNPU-226ENST00000640218 DMRTA2Q96SC8 542 aa12.36□□□□□ -0.43
HNRNPU-226ENST00000640218 TBR1Q16650 682 aa12.36□□□□□ -0.43
HNRNPU-226ENST00000640218 OR4X2Q8NGF9 303 aa12.36□□□□□ -0.43
HNRNPU-226ENST00000640218 PRELID3AQ96N28 172 aa12.36□□□□□ -0.43
HNRNPU-226ENST00000640218 VENTXO95231 258 aa12.36□□□□□ -0.43
HNRNPU-226ENST00000640218 PLPPR1Q8TBJ4 325 aa12.36□□□□□ -0.43
HNRNPU-226ENST00000640218 A0A1B0GTI1 187 aa12.36□□□□□ -0.43
HNRNPU-226ENST00000640218 MIR17HGQ75NE6 70 aa12.36□□□□□ -0.43
HNRNPU-226ENST00000640218 TRAV8-6A0A0B4J262 113 aa12.35□□□□□ -0.43
HNRNPU-226ENST00000640218 ATP5G3P48201 142 aa12.35□□□□□ -0.43
HNRNPU-226ENST00000640218 ZIC4Q8N9L1 334 aa12.35□□□□□ -0.43
HNRNPU-226ENST00000640218 ZNF414Q96IQ9 312 aa12.35□□□□□ -0.43
HNRNPU-226ENST00000640218 MRPS16Q9Y3D3 137 aaKnown RBP12.35□□□□□ -0.43
HNRNPU-226ENST00000640218 RALGAPA1Q6GYQ0 2036 aa12.35□□□□□ -0.43
HNRNPU-226ENST00000640218 IL36BQ9NZH7 164 aa12.35□□□□□ -0.43
HNRNPU-226ENST00000640218 SEMA5BQ9P283 1151 aa12.35□□□□□ -0.43
HNRNPU-226ENST00000640218 ALPK2Q86TB3 2170 aa12.35□□□□□ -0.43
HNRNPU-226ENST00000640218 TFF1P04155 84 aa12.35□□□□□ -0.43
HNRNPU-226ENST00000640218 H7C1H1 209 aa12.35□□□□□ -0.43
HNRNPU-226ENST00000640218 DDTP30046 118 aa12.35□□□□□ -0.43
HNRNPU-226ENST00000640218 ZCCHC24Q8N2G6 241 aaKnown RBP12.35□□□□□ -0.43
HNRNPU-226ENST00000640218 CBLN4Q9NTU7 201 aa12.35□□□□□ -0.43
HNRNPU-226ENST00000640218 FAM90A1Q86YD7 464 aa12.34□□□□□ -0.43
HNRNPU-226ENST00000640218 RNASE6Q93091 150 aaKnown RBP12.34□□□□□ -0.43
HNRNPU-226ENST00000640218 REC114Q7Z4M0 266 aa12.34□□□□□ -0.43
HNRNPU-226ENST00000640218 RNASEH2CQ8TDP1 164 aaKnown RBP12.34□□□□□ -0.43
HNRNPU-226ENST00000640218 WBP1Q96G27 269 aa12.34□□□□□ -0.43
HNRNPU-226ENST00000640218 FMC1Q96HJ9 113 aa12.34□□□□□ -0.43
HNRNPU-226ENST00000640218 LINC01587Q99440 93 aa12.34□□□□□ -0.43
HNRNPU-226ENST00000640218 MRPL13Q9BYD1 178 aaKnown RBP12.34□□□□□ -0.43
HNRNPU-226ENST00000640218 SAA2-SAA4A0A096LPE2 208 aa12.34□□□□□ -0.43
HNRNPU-226ENST00000640218 SAA2P0DJI9 122 aaPredicted RBP12.34□□□□□ -0.43
HNRNPU-226ENST00000640218 COLCA1Q6ZS62 124 aa12.34□□□□□ -0.43
HNRNPU-226ENST00000640218 SPTA1P02549 2419 aa12.34□□□□□ -0.43
HNRNPU-226ENST00000640218 SAA1P0DJI8 122 aaPredicted RBP12.34□□□□□ -0.43
HNRNPU-226ENST00000640218 IMMP2LQ96T52 175 aa12.34□□□□□ -0.43
HNRNPU-226ENST00000640218 APOHP02749 345 aaPredicted RBP12.34□□□□□ -0.43
HNRNPU-226ENST00000640218 IGFBP3P17936 291 aaPredicted RBP12.33□□□□□ -0.43
HNRNPU-226ENST00000640218 CD33P20138 364 aa12.33□□□□□ -0.43
HNRNPU-226ENST00000640218 CD24P25063 80 aa12.33□□□□□ -0.43
HNRNPU-226ENST00000640218 EFNB1P98172 346 aa12.33□□□□□ -0.43
HNRNPU-226ENST00000640218 Q9H3A6 140 aa12.33□□□□□ -0.43
HNRNPU-226ENST00000640218 DPRXA6NFQ7 191 aa12.33□□□□□ -0.44
HNRNPU-226ENST00000640218 PARD6GQ9BYG4 376 aaPredicted RBP12.33□□□□□ -0.44
HNRNPU-226ENST00000640218 RTTNQ86VV8 2226 aa12.33□□□□□ -0.44
HNRNPU-226ENST00000640218 OR11H12B2RN74 326 aa12.33□□□□□ -0.44
HNRNPU-226ENST00000640218 OR11H1Q8NG94 326 aa12.33□□□□□ -0.44
HNRNPU-226ENST00000640218 OR11H2Q8NH07 326 aa12.33□□□□□ -0.44
HNRNPU-226ENST00000640218 PMCHL2Q9BQD1 86 aa12.33□□□□□ -0.44
HNRNPU-226ENST00000640218 DNAL4O96015 105 aa12.33□□□□□ -0.44
HNRNPU-226ENST00000640218 GREB1Q4ZG55 1949 aa12.33□□□□□ -0.44
HNRNPU-226ENST00000640218 IGLV3-12A0A075B6K2 115 aa12.33□□□□□ -0.44
HNRNPU-226ENST00000640218 A0A1B0GUT8 65 aa12.33□□□□□ -0.44
HNRNPU-226ENST00000640218 TBX6O95947 436 aaPredicted RBP12.33□□□□□ -0.44
HNRNPU-226ENST00000640218 LYNX1G3V0Z9 82 aa12.32□□□□□ -0.44
HNRNPU-226ENST00000640218 LYNX1P0DP58 116 aa12.32□□□□□ -0.44
HNRNPU-226ENST00000640218 LYZL4Q96KX0 146 aa12.32□□□□□ -0.44
HNRNPU-226ENST00000640218 SCGB3A1Q96QR1 104 aa12.32□□□□□ -0.44
HNRNPU-226ENST00000640218 ALKBH7Q9BT30 221 aaPredicted RBP12.32□□□□□ -0.44
HNRNPU-226ENST00000640218 DEPPQ9NTK1 212 aa12.32□□□□□ -0.44
HNRNPU-226ENST00000640218 GLMPQ8WWB7 406 aa12.32□□□□□ -0.44
HNRNPU-226ENST00000640218 C2orf88Q9BSF0 95 aa12.32□□□□□ -0.44
HNRNPU-226ENST00000640218 RPP21Q9H633 154 aaKnown RBP12.32□□□□□ -0.44
HNRNPU-226ENST00000640218 CACNG8Q8WXS5 425 aa12.32□□□□□ -0.44
HNRNPU-226ENST00000640218 NBR2O15453 112 aa12.32□□□□□ -0.44
HNRNPU-226ENST00000640218 TRIOBPQ9H2D6 2365 aa12.32□□□□□ -0.44
HNRNPU-226ENST00000640218 RALGAPA2Q2PPJ7 1873 aa12.32□□□□□ -0.44
HNRNPU-226ENST00000640218 SPRR3Q9UBC9 169 aa12.32□□□□□ -0.44
HNRNPU-226ENST00000640218 FAM71F2Q6NXP2 309 aa12.31□□□□□ -0.44
HNRNPU-226ENST00000640218 TMEM183AQ8IXX5 376 aa12.31□□□□□ -0.44
HNRNPU-226ENST00000640218 SRP19P09132 144 aaKnown RBP12.31□□□□□ -0.44
HNRNPU-226ENST00000640218 SMIM13P0DJ93 91 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms