RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 CXCR4P61073 352 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 BOD1L2Q8IYS8 172 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 ZNF418Q8TF45 676 aaPredicted RBP-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 RSL24D1Q9UHA3 163 aaKnown RBP-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 HECTD4Q9Y4D8 3996 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 PDE4DIPQ5VU43 2346 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 BIRC6Q9NR09 4857 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 F5P12259 2224 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 TNCP24821 2201 aa-0.07□□□□□ -2.42
CCDC7-211ENST00000638889 MTORP42345 2549 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 LRRK2Q5S007 2527 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 DNAH9Q9NYC9 4486 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 CEP290O15078 2479 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 DOPEY2Q9Y3R5 2298 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 HRNRQ86YZ3 2850 aaPredicted RBP-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 NBPF19A0A087WUL8 3843 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 SMLR1H3BR10 107 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 TOX3O15405 576 aaPredicted RBP-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 FADS1O60427 444 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 ORM1P02763 201 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 S100A9P06702 114 aaKnown RBP-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 KRTAP2-3P0C7H8 128 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 ZNF80P51504 273 aaPredicted RBP-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 OR4D2P58180 307 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 DMTNQ08495 405 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 MGAT3Q09327 533 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 SRSF6Q13247 344 aaKnown RBP-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 GDF5OSQ5U4N7 250 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 PDPK2PQ6A1A2 396 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 AAED1Q7RTV5 226 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 ZNF550Q7Z398 422 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 TSKUQ8WUA8 353 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 EEF1AKMT1Q8WVE0 214 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 KRTAP2-4Q9BYR9 128 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 KRTAP2-1Q9BYU5 128 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 AK3Q9UIJ7 227 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 FUT9Q9Y231 359 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 NBASA2RRP1 2371 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 ADGRB2O60241 1585 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 RP1P56715 2156 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 KNL1Q8NG31 2342 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 FAT2Q9NYQ8 4349 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 KIF15Q9NS87 1388 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 KCPQ6ZWJ8 1503 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 SACSQ9NZJ4 4579 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 TNRC6AQ8NDV7 1962 aaKnown RBP-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 PKDREJQ9NTG1 2253 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 ZNF292O60281 2723 aa-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 DSPP15924 2871 aaKnown RBP-0.08□□□□□ -2.42
CCDC7-211ENST00000638889 DYNC1H1Q14204 4646 aaKnown RBP-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 PKD1P98161 4303 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 A0A1W2PPM0 123 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 GGT3PA6NGU5 568 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 F8VZ95 297 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 M0R2N4 97 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 HYPMO75409 117 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 OR5F1O95221 314 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 C1QAP02745 245 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 DDTP30046 118 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 EIF2B2P49770 351 aaKnown RBP-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 POLR2GP62487 172 aaKnown RBP eCLIP-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 TNFAIP6P98066 277 aaPredicted RBP-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 KRTAP20-2Q3LI61 65 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 KRTAP19-7Q3SYF9 63 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 DNM1P34Q6PK57 102 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 SPINK6Q6UWN8 80 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 C5orf46Q6UWT4 87 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 ZNF826PQ6ZT77 177 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 FAM19A5Q7Z5A7 132 aaPredicted RBP-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 C11orf40Q8WZ69 217 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 TMEM70Q9BUB7 260 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 DERL2Q9GZP9 239 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 CISHQ9NSE2 258 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 LAMA5O15230 3695 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 VPS13DQ5THJ4 4388 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 ZANQ9Y493 2812 aa-0.09□□□□□ -2.42
CCDC7-211ENST00000638889 COL1A1P02452 1464 aaPredicted RBP-0.1□□□□□ -2.42
CCDC7-211ENST00000638889 SNRNP200O75643 2136 aaKnown RBP-0.1□□□□□ -2.42
CCDC7-211ENST00000638889 COL6A5A8TX70 2615 aa-0.1□□□□□ -2.42
CCDC7-211ENST00000638889 HECTD1Q9ULT8 2610 aa-0.1□□□□□ -2.42
CCDC7-211ENST00000638889 UNC13CQ8NB66 2214 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 DNAH6Q9C0G6 4158 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 IGHV1-69-2A0A0G2JMI3 117 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 C2orf70A6NJV1 201 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 NOS1APO75052 506 aaPredicted RBP-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 SPINK1P00995 79 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 FGF6P10767 208 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 RPS4Y1P22090 263 aaKnown RBP-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 KRTAP19-8Q3LI54 63 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 FAM78BQ5VT40 261 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 SYPL2Q5VXT5 272 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 LCN15Q6UWW0 184 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 WFDC11Q8NEX6 87 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 NABP2Q9BQ15 211 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 WDR54Q9H977 334 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 NIT2Q9NQR4 276 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 PAQR5Q9NXK6 330 aaPredicted RBP-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 HEATR5AQ86XA9 2040 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 CELSR1Q9NYQ6 3014 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 FAM186AA6NE01 2351 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms