RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SRSF12Q8WXF0 261 aaKnown RBP12.23□□□□□ -0.45
CLN6-219ENST00000637329 GNPNAT1Q96EK6 184 aaPredicted RBP12.23□□□□□ -0.45
CLN6-219ENST00000637329 IGLC7A0M8Q6 106 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 FGF16O43320 207 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 TSPAN9O75954 239 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 OPN1MWP04001 364 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 SEC11BP0C7V7 166 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 OPN1MW2P0DN77 364 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 OPN1MW3P0DN78 364 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 RNASE2P10153 161 aaKnown RBP12.22□□□□□ -0.45
CLN6-219ENST00000637329 CD24P25063 80 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 SNCAP37840 140 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 SUB1P53999 127 aaKnown RBP eCLIP12.22□□□□□ -0.45
CLN6-219ENST00000637329 RAB14P61106 215 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 SSBP2P81877 361 aaPredicted RBP12.22□□□□□ -0.45
CLN6-219ENST00000637329 ARL16Q0P5N6 197 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 NDUFA5Q16718 116 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 FBLN7Q53RD9 439 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 ETV3LQ6ZN32 361 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 TMEM170AQ8WVE7 144 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 SLC25A32Q9H2D1 315 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 UQCC1Q9NVA1 299 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 PITPNC1Q9UKF7 332 aa12.22□□□□□ -0.45
CLN6-219ENST00000637329 TET2Q6N021 2002 aaPredicted RBP12.21□□□□□ -0.45
CLN6-219ENST00000637329 WNK2Q9Y3S1 2297 aa12.21□□□□□ -0.45
CLN6-219ENST00000637329 A0A1B0GW64 132 aa12.21□□□□□ -0.45
CLN6-219ENST00000637329 NCBP2LA6PVI3 153 aaKnown RBP12.21□□□□□ -0.45
CLN6-219ENST00000637329 TEX22C9J3V5 150 aa12.21□□□□□ -0.45
CLN6-219ENST00000637329 IFNA4P05014 189 aa12.21□□□□□ -0.45
CLN6-219ENST00000637329 SPP1P10451 314 aa12.21□□□□□ -0.45
CLN6-219ENST00000637329 GNB1P62873 340 aa12.21□□□□□ -0.45
CLN6-219ENST00000637329 WT1-ASQ06250 92 aa12.21□□□□□ -0.45
CLN6-219ENST00000637329 CLLU1Q5K131 121 aa12.21□□□□□ -0.45
CLN6-219ENST00000637329 FAM120AOSQ5T036 256 aa12.21□□□□□ -0.45
CLN6-219ENST00000637329 SLC25A24Q6NUK1 477 aa12.21□□□□□ -0.45
CLN6-219ENST00000637329 ZNF562Q6V9R5 426 aa12.21□□□□□ -0.45
CLN6-219ENST00000637329 C16orf82Q7Z2V1 217 aa12.21□□□□□ -0.45
CLN6-219ENST00000637329 Q8N9W7 124 aa12.21□□□□□ -0.45
CLN6-219ENST00000637329 OR10W1Q8NGF6 305 aa12.21□□□□□ -0.45
CLN6-219ENST00000637329 RBM14Q96PK6 669 aaKnown RBP12.21□□□□□ -0.45
CLN6-219ENST00000637329 MOB4Q9Y3A3 225 aa12.21□□□□□ -0.45
CLN6-219ENST00000637329 RPS10-NUDT3A0A1W2PQS6 291 aa12.2□□□□□ -0.46
CLN6-219ENST00000637329 E7EUB6 86 aa12.2□□□□□ -0.46
CLN6-219ENST00000637329 CNIH1O95406 144 aa12.2□□□□□ -0.46
CLN6-219ENST00000637329 PVRIGQ6DKI7 326 aa12.2□□□□□ -0.46
CLN6-219ENST00000637329 RNASEH2CQ8TDP1 164 aaKnown RBP12.2□□□□□ -0.46
CLN6-219ENST00000637329 TMED6Q8WW62 240 aa12.2□□□□□ -0.46
CLN6-219ENST00000637329 ARPC1AQ92747 370 aa12.2□□□□□ -0.46
CLN6-219ENST00000637329 MDFIQ99750 246 aa12.2□□□□□ -0.46
CLN6-219ENST00000637329 SSX3Q99909 188 aa12.2□□□□□ -0.46
CLN6-219ENST00000637329 RASL11BQ9BPW5 248 aa12.2□□□□□ -0.46
CLN6-219ENST00000637329 UBE2L5PA0A1B0GUS4 154 aa12.19□□□□□ -0.46
CLN6-219ENST00000637329 M0QZK8 103 aa12.19□□□□□ -0.46
CLN6-219ENST00000637329 CORTO00230 105 aa12.19□□□□□ -0.46
CLN6-219ENST00000637329 FCN1O00602 326 aa12.19□□□□□ -0.46
CLN6-219ENST00000637329 MPDU1O75352 247 aa12.19□□□□□ -0.46
CLN6-219ENST00000637329 OR13C7P0DN81 318 aa12.19□□□□□ -0.46
CLN6-219ENST00000637329 FXYD3Q14802 87 aa12.19□□□□□ -0.46
CLN6-219ENST00000637329 HSD17B11Q8NBQ5 300 aa12.19□□□□□ -0.46
CLN6-219ENST00000637329 OR1L6Q8NGR2 347 aa12.19□□□□□ -0.46
CLN6-219ENST00000637329 OR1P1Q8NH06 330 aa12.19□□□□□ -0.46
CLN6-219ENST00000637329 PIFOQ8TCI5 191 aa12.19□□□□□ -0.46
CLN6-219ENST00000637329 SCGB1C1Q8TD33 95 aa12.19□□□□□ -0.46
CLN6-219ENST00000637329 RNF141Q8WVD5 230 aa12.19□□□□□ -0.46
CLN6-219ENST00000637329 SLC25A33Q9BSK2 321 aa12.19□□□□□ -0.46
CLN6-219ENST00000637329 PSMG3Q9BT73 122 aaPredicted RBP12.19□□□□□ -0.46
CLN6-219ENST00000637329 WDR61Q9GZS3 305 aaKnown RBP12.19□□□□□ -0.46
CLN6-219ENST00000637329 TIMM9Q9Y5J7 89 aa12.19□□□□□ -0.46
CLN6-219ENST00000637329 CD5LO43866 347 aa12.18□□□□□ -0.46
CLN6-219ENST00000637329 SOX15O60248 233 aa12.18□□□□□ -0.46
CLN6-219ENST00000637329 MDKP21741 143 aaPredicted RBP12.18□□□□□ -0.46
CLN6-219ENST00000637329 ATP6V0CP27449 155 aa12.18□□□□□ -0.46
CLN6-219ENST00000637329 RAB5CP51148 216 aa12.18□□□□□ -0.46
CLN6-219ENST00000637329 TUSC1Q2TAM9 212 aa12.18□□□□□ -0.46
CLN6-219ENST00000637329 CIARTQ8N365 385 aaPredicted RBP12.18□□□□□ -0.46
CLN6-219ENST00000637329 C5orf56Q8N8D9 126 aa12.18□□□□□ -0.46
CLN6-219ENST00000637329 CACNG8Q8WXS5 425 aa12.18□□□□□ -0.46
CLN6-219ENST00000637329 TAF15Q92804 592 aaKnown RBP eCLIP12.18□□□□□ -0.46
CLN6-219ENST00000637329 P2RX4Q99571 388 aa12.18□□□□□ -0.46
CLN6-219ENST00000637329 WDR83OSQ9Y284 106 aa12.18□□□□□ -0.46
CLN6-219ENST00000637329 F11RQ9Y624 299 aaKnown RBP12.18□□□□□ -0.46
CLN6-219ENST00000637329 ZNF469Q96JG9 3925 aaPredicted RBP12.17□□□□□ -0.46
CLN6-219ENST00000637329 A6NDX4 124 aa12.17□□□□□ -0.46
CLN6-219ENST00000637329 NPIPB5A8MRT5 1133 aa12.17□□□□□ -0.46
CLN6-219ENST00000637329 UMAD1C9J7I0 102 aa12.17□□□□□ -0.46
CLN6-219ENST00000637329 H3BUX3 64 aa12.17□□□□□ -0.46
CLN6-219ENST00000637329 NMBP08949 121 aa12.17□□□□□ -0.46
CLN6-219ENST00000637329 GPX4P36969 197 aaPredicted RBP12.17□□□□□ -0.46
CLN6-219ENST00000637329 SULT1A2P50226 295 aa12.17□□□□□ -0.46
CLN6-219ENST00000637329 CX3CL1P78423 397 aa12.17□□□□□ -0.46
CLN6-219ENST00000637329 OR5R1Q8NH85 324 aa12.17□□□□□ -0.46
CLN6-219ENST00000637329 ABHD5Q8WTS1 349 aa12.17□□□□□ -0.46
CLN6-219ENST00000637329 SSMEM1Q8WWF3 244 aa12.17□□□□□ -0.46
CLN6-219ENST00000637329 KCNIP2Q9NS61 270 aa12.17□□□□□ -0.46
CLN6-219ENST00000637329 ACANP16112 2415 aa12.17□□□□□ -0.46
CLN6-219ENST00000637329 IGHV7-81A0A0B4J1V7 117 aa12.16□□□□□ -0.46
CLN6-219ENST00000637329 TRIM77I1YAP6 450 aa12.16□□□□□ -0.46
CLN6-219ENST00000637329 SMAD7O15105 426 aaKnown RBP12.16□□□□□ -0.46
CLN6-219ENST00000637329 CYB5BO43169 146 aa12.16□□□□□ -0.46
CLN6-219ENST00000637329 FBXO24O75426 580 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms