RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 ISOC1Q96CN7 298 aa10.46□□□□□ -0.73
PNKP-228ENST00000637325 C14orf166Q9Y224 244 aaKnown RBP10.46□□□□□ -0.73
PNKP-228ENST00000637325 IGHV3-35A0A0C4DH35 117 aa10.45□□□□□ -0.74
PNKP-228ENST00000637325 OR2T8A6NH00 312 aa10.45□□□□□ -0.74
PNKP-228ENST00000637325 H3BMQ9 156 aa10.45□□□□□ -0.74
PNKP-228ENST00000637325 CTDSPLO15194 276 aa10.45□□□□□ -0.74
PNKP-228ENST00000637325 EDN2P20800 178 aa10.45□□□□□ -0.74
PNKP-228ENST00000637325 CBLN1P23435 193 aa10.45□□□□□ -0.74
PNKP-228ENST00000637325 AKR1C2P52895 323 aa10.45□□□□□ -0.74
PNKP-228ENST00000637325 ERHP84090 104 aaKnown RBP10.45□□□□□ -0.74
PNKP-228ENST00000637325 RNASE11Q8TAA1 199 aaKnown RBP10.45□□□□□ -0.74
PNKP-228ENST00000637325 TP53RKQ96S44 253 aa10.45□□□□□ -0.74
PNKP-228ENST00000637325 PLEKHA3Q9HB20 300 aa10.45□□□□□ -0.74
PNKP-228ENST00000637325 SLC2A8Q9NY64 477 aa10.45□□□□□ -0.74
PNKP-228ENST00000637325 C21orf62Q9NYP8 219 aa10.45□□□□□ -0.74
PNKP-228ENST00000637325 CCDC160A6NGH7 325 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 A8MZ25 164 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 TGOLN2O43493 480 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 CTSDP07339 412 aaPredicted RBP10.44□□□□□ -0.74
PNKP-228ENST00000637325 AKAIN1P0CW23 69 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 MFAP2P55001 183 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 CD81P60033 236 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 HSPE1P61604 102 aaKnown RBP10.44□□□□□ -0.74
PNKP-228ENST00000637325 PRCDQ00LT1 54 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 SP6Q3SY56 376 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 Q56UQ5 140 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 ZNF57Q68EA5 555 aaPredicted RBP10.44□□□□□ -0.74
PNKP-228ENST00000637325 FAAP20Q6NZ36 180 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 OR2C3Q8N628 320 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 UBAC2Q8NBM4 344 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 UXS1Q8NBZ7 420 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 OR1P1Q8NH06 330 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 MCFD2Q8NI22 146 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 SCARB1Q8WTV0 552 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 CACNG8Q8WXS5 425 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 MISP3Q96FF7 219 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 BSCL2Q96G97 398 aaPredicted RBP10.44□□□□□ -0.74
PNKP-228ENST00000637325 RCHY1Q96PM5 261 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 THAP7Q9BT49 309 aaPredicted RBP10.44□□□□□ -0.74
PNKP-228ENST00000637325 PDCD10Q9BUL8 212 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 C19orf73Q9NVV2 129 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 RSL24D1Q9UHA3 163 aaKnown RBP10.44□□□□□ -0.74
PNKP-228ENST00000637325 UFC1Q9Y3C8 167 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 STAB2Q8WWQ8 2551 aa10.44□□□□□ -0.74
PNKP-228ENST00000637325 TENM3Q9P273 2699 aa10.43□□□□□ -0.74
PNKP-228ENST00000637325 TEX13DA0A0J9YY54 714 aaPredicted RBP10.43□□□□□ -0.74
PNKP-228ENST00000637325 TMEM213A2RRL7 107 aa10.43□□□□□ -0.74
PNKP-228ENST00000637325 FABP12A6NFH5 140 aa10.43□□□□□ -0.74
PNKP-228ENST00000637325 ZNF785A8K8V0 405 aa10.43□□□□□ -0.74
PNKP-228ENST00000637325 A8MWP6 167 aa10.43□□□□□ -0.74
PNKP-228ENST00000637325 B3GALNT1O75752 331 aa10.43□□□□□ -0.74
PNKP-228ENST00000637325 IZUMO4Q1ZYL8 232 aa10.43□□□□□ -0.74
PNKP-228ENST00000637325 TM4SF20Q53R12 229 aa10.43□□□□□ -0.74
PNKP-228ENST00000637325 SPSB3Q6PJ21 355 aa10.43□□□□□ -0.74
PNKP-228ENST00000637325 SLC35G3Q8N808 338 aa10.43□□□□□ -0.74
PNKP-228ENST00000637325 MARC2Q969Z3 335 aa10.43□□□□□ -0.74
PNKP-228ENST00000637325 RRNAD1Q96FB5 475 aaKnown RBP10.43□□□□□ -0.74
PNKP-228ENST00000637325 NEURL2Q9BR09 285 aa10.43□□□□□ -0.74
PNKP-228ENST00000637325 SLIRPQ9GZT3 109 aaKnown RBP10.43□□□□□ -0.74
PNKP-228ENST00000637325 GAR1Q9NY12 217 aaKnown RBP10.43□□□□□ -0.74
PNKP-228ENST00000637325 SELENOKQ9Y6D0 94 aa10.43□□□□□ -0.74
PNKP-228ENST00000637325 K7EIM0 57 aa10.42□□□□□ -0.74
PNKP-228ENST00000637325 IFNA17P01571 189 aa10.42□□□□□ -0.74
PNKP-228ENST00000637325 IGKV1-5P01602 117 aa10.42□□□□□ -0.74
PNKP-228ENST00000637325 ELLP55199 621 aaPredicted RBP10.42□□□□□ -0.74
PNKP-228ENST00000637325 SPINK9Q5DT21 86 aa10.42□□□□□ -0.74
PNKP-228ENST00000637325 UNQ9165/PRO28630Q6UXU0 137 aa10.42□□□□□ -0.74
PNKP-228ENST00000637325 OR4C16Q8NGL9 310 aa10.42□□□□□ -0.74
PNKP-228ENST00000637325 WDR89Q96FK6 387 aaPredicted RBP10.42□□□□□ -0.74
PNKP-228ENST00000637325 ATP6V0BQ99437 205 aa10.42□□□□□ -0.74
PNKP-228ENST00000637325 PRRT1Q99946 306 aa10.42□□□□□ -0.74
PNKP-228ENST00000637325 ZNF436Q9C0F3 470 aaPredicted RBP10.42□□□□□ -0.74
PNKP-228ENST00000637325 ENY2Q9NPA8 101 aa10.42□□□□□ -0.74
PNKP-228ENST00000637325 MRPL27Q9P0M9 148 aaKnown RBP10.42□□□□□ -0.74
PNKP-228ENST00000637325 CEPT1Q9Y6K0 416 aa10.42□□□□□ -0.74
PNKP-228ENST00000637325 GSTZ1O43708 216 aaPredicted RBP10.41□□□□□ -0.74
PNKP-228ENST00000637325 UCP1P25874 307 aa10.41□□□□□ -0.74
PNKP-228ENST00000637325 TNFSF8P32971 234 aa10.41□□□□□ -0.74
PNKP-228ENST00000637325 SNCAP37840 140 aa10.41□□□□□ -0.74
PNKP-228ENST00000637325 MFAP4P55083 255 aa10.41□□□□□ -0.74
PNKP-228ENST00000637325 SURF2Q15527 256 aaPredicted RBP10.41□□□□□ -0.74
PNKP-228ENST00000637325 BTNL8Q6UX41 500 aa10.41□□□□□ -0.74
PNKP-228ENST00000637325 RBPMS2Q6ZRY4 209 aaKnown RBP10.41□□□□□ -0.74
PNKP-228ENST00000637325 PINX1Q96BK5 328 aaKnown RBP10.41□□□□□ -0.74
PNKP-228ENST00000637325 RTBDNQ9BSG5 229 aaPredicted RBP10.41□□□□□ -0.74
PNKP-228ENST00000637325 C20orf24Q9BUV8 137 aa10.41□□□□□ -0.74
PNKP-228ENST00000637325 NAA60Q9H7X0 242 aa10.41□□□□□ -0.74
PNKP-228ENST00000637325 MCUBQ9NWR8 336 aa10.41□□□□□ -0.74
PNKP-228ENST00000637325 MLXQ9UH92 298 aa10.41□□□□□ -0.74
PNKP-228ENST00000637325 SCP2D1Q9UJQ7 156 aa10.41□□□□□ -0.74
PNKP-228ENST00000637325 A0A0B4J293 547 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 ANKRD20A5PA0PJZ0 165 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 NDUFA4O00483 81 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 NUPL2O15504 423 aaKnown RBP10.4□□□□□ -0.74
PNKP-228ENST00000637325 ST8SIA3O43173 380 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 SCAF4O95104 1147 aaKnown RBP10.4□□□□□ -0.74
PNKP-228ENST00000637325 MT-CO2P00403 227 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 CD7P09564 240 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 OR5AC1P0C628 307 aa10.4□□□□□ -0.74
PNKP-228ENST00000637325 HOXA1P49639 335 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms