RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 HOXA1P49639 335 aaPredicted RBP12.46□□□□□ -0.41
CLN6-216ENST00000636876 TPPP2P59282 170 aa12.46□□□□□ -0.41
CLN6-216ENST00000636876 C2orf68Q2NKX9 166 aa12.46□□□□□ -0.41
CLN6-216ENST00000636876 IAH1Q2TAA2 248 aaPredicted RBP12.46□□□□□ -0.41
CLN6-216ENST00000636876 KHDC1LQ5JSQ8 128 aa12.46□□□□□ -0.41
CLN6-216ENST00000636876 OR2C3Q8N628 320 aa12.46□□□□□ -0.41
CLN6-216ENST00000636876 OR10C1Q96KK4 312 aa12.46□□□□□ -0.41
CLN6-216ENST00000636876 ENY2Q9NPA8 101 aa12.46□□□□□ -0.41
CLN6-216ENST00000636876 ZFP57Q9NU63 452 aa12.46□□□□□ -0.41
CLN6-216ENST00000636876 TSSC4Q9Y5U2 329 aaPredicted RBP12.46□□□□□ -0.41
CLN6-216ENST00000636876 ALG5Q9Y673 324 aa12.46□□□□□ -0.41
CLN6-216ENST00000636876 CEBPZOSA8MTT3 80 aa12.45□□□□□ -0.42
CLN6-216ENST00000636876 ADARB2-AS1A8MUL3 147 aa12.45□□□□□ -0.42
CLN6-216ENST00000636876 RPL23AP62750 156 aaKnown RBP12.45□□□□□ -0.42
CLN6-216ENST00000636876 ERHP84090 104 aaKnown RBP12.45□□□□□ -0.42
CLN6-216ENST00000636876 KIAA0141Q14154 515 aaPredicted RBP12.45□□□□□ -0.42
CLN6-216ENST00000636876 KLK9Q2XQG4 91 aa12.45□□□□□ -0.42
CLN6-216ENST00000636876 NDUFA11Q86Y39 141 aa12.45□□□□□ -0.42
CLN6-216ENST00000636876 ZBTB8BQ8NAP8 495 aaPredicted RBP12.45□□□□□ -0.42
CLN6-216ENST00000636876 FANCD2OSQ96PS1 177 aa12.45□□□□□ -0.42
CLN6-216ENST00000636876 RBKSQ9H477 322 aa12.45□□□□□ -0.42
CLN6-216ENST00000636876 KLK9Q9UKQ9 250 aa12.45□□□□□ -0.42
CLN6-216ENST00000636876 F11RQ9Y624 299 aaKnown RBP12.45□□□□□ -0.42
CLN6-216ENST00000636876 TRBV9A0A0B4J1U6 114 aa12.44□□□□□ -0.42
CLN6-216ENST00000636876 C13orf42A0A1B0GVH6 325 aa12.44□□□□□ -0.42
CLN6-216ENST00000636876 A0A1W2PRX2 142 aa12.44□□□□□ -0.42
CLN6-216ENST00000636876 C5orf51A6NDU8 294 aa12.44□□□□□ -0.42
CLN6-216ENST00000636876 FAM25EA8MYX2 175 aa12.44□□□□□ -0.42
CLN6-216ENST00000636876 SSNA1O43805 119 aa12.44□□□□□ -0.42
CLN6-216ENST00000636876 DEFA4P12838 97 aa12.44□□□□□ -0.42
CLN6-216ENST00000636876 CDX1P47902 265 aaPredicted RBP12.44□□□□□ -0.42
CLN6-216ENST00000636876 ZNF491Q8N8L2 437 aa12.44□□□□□ -0.42
CLN6-216ENST00000636876 ZNF114Q8NC26 417 aa12.44□□□□□ -0.42
CLN6-216ENST00000636876 OR4D5Q8NGN0 318 aa12.44□□□□□ -0.42
CLN6-216ENST00000636876 P2RX4Q99571 388 aa12.44□□□□□ -0.42
CLN6-216ENST00000636876 IGLV11-55A0A075B6I3 123 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 FAM223BA6NKX1 122 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 CYB5BO43169 146 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 MED6O75586 246 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 HIST1H1BP16401 226 aaKnown RBP12.43□□□□□ -0.42
CLN6-216ENST00000636876 RHOGP84095 191 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 DEFA5Q01523 94 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 ID3Q02535 119 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 NSUN5P1Q3KNT7 163 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 GSG1LQ6UXU4 331 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 FAM223AQ8IWN6 122 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 NECAP1Q8NC96 275 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 OR1L6Q8NGR2 347 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 OR1P1Q8NH06 330 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 DTD1Q8TEA8 209 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 UBE2E2Q96LR5 201 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 C2orf50Q96LR7 162 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 HEYLQ9NQ87 328 aaPredicted RBP12.43□□□□□ -0.42
CLN6-216ENST00000636876 GSKIPQ9P0R6 139 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 DMRT1Q9Y5R6 373 aa12.43□□□□□ -0.42
CLN6-216ENST00000636876 A0A0G2JLM5 398 aa12.42□□□□□ -0.42
CLN6-216ENST00000636876 GOSR2O14653 212 aa12.42□□□□□ -0.42
CLN6-216ENST00000636876 OR2J3O76001 311 aa12.42□□□□□ -0.42
CLN6-216ENST00000636876 SNCAP37840 140 aa12.42□□□□□ -0.42
CLN6-216ENST00000636876 NKX2-1P43699 371 aaPredicted RBP12.42□□□□□ -0.42
CLN6-216ENST00000636876 MFAP2P55001 183 aa12.42□□□□□ -0.42
CLN6-216ENST00000636876 C11orf87Q6NUJ2 197 aa12.42□□□□□ -0.42
CLN6-216ENST00000636876 SLC25A24Q6NUK1 477 aa12.42□□□□□ -0.42
CLN6-216ENST00000636876 C18orf65Q6ZTR6 163 aa12.42□□□□□ -0.42
CLN6-216ENST00000636876 USMG5Q96IX5 58 aa12.42□□□□□ -0.42
CLN6-216ENST00000636876 MAGT1Q9H0U3 335 aa12.42□□□□□ -0.42
CLN6-216ENST00000636876 GNB4Q9HAV0 340 aa12.42□□□□□ -0.42
CLN6-216ENST00000636876 FBXL7Q9UJT9 491 aa12.42□□□□□ -0.42
CLN6-216ENST00000636876 NUDT19A8MXV4 375 aa12.41□□□□□ -0.42
CLN6-216ENST00000636876 SYNGR2O43760 224 aa12.41□□□□□ -0.42
CLN6-216ENST00000636876 NDUFB8O95169 186 aa12.41□□□□□ -0.42
CLN6-216ENST00000636876 SIX6O95475 246 aa12.41□□□□□ -0.42
CLN6-216ENST00000636876 RNASE2P10153 161 aaKnown RBP12.41□□□□□ -0.42
CLN6-216ENST00000636876 HTR2BP41595 481 aa12.41□□□□□ -0.42
CLN6-216ENST00000636876 BSXQ3C1V8 233 aa12.41□□□□□ -0.42
CLN6-216ENST00000636876 KLHL30-AS1Q8NEE0 82 aa12.41□□□□□ -0.42
CLN6-216ENST00000636876 C4orf3Q8WVX3 66 aa12.41□□□□□ -0.42
CLN6-216ENST00000636876 HIPK2Q9H2X6 1198 aa12.41□□□□□ -0.42
CLN6-216ENST00000636876 WNK1Q9H4A3 2382 aa12.4□□□□□ -0.42
CLN6-216ENST00000636876 SCGB1D2O95969 90 aa12.4□□□□□ -0.42
CLN6-216ENST00000636876 IGHV3-11P01762 117 aa12.4□□□□□ -0.42
CLN6-216ENST00000636876 IAPPP10997 89 aa12.4□□□□□ -0.42
CLN6-216ENST00000636876 SUB1P53999 127 aaKnown RBP eCLIP12.4□□□□□ -0.42
CLN6-216ENST00000636876 POLR2GP62487 172 aaKnown RBP eCLIP12.4□□□□□ -0.42
CLN6-216ENST00000636876 RUNX1Q01196 453 aa12.4□□□□□ -0.42
CLN6-216ENST00000636876 ATP5G2Q06055 141 aa12.4□□□□□ -0.42
CLN6-216ENST00000636876 CIB3Q96Q77 187 aaPredicted RBP12.4□□□□□ -0.42
CLN6-216ENST00000636876 THYN1Q9P016 225 aa12.4□□□□□ -0.42
CLN6-216ENST00000636876 MGAT4CQ9UBM8 478 aa12.4□□□□□ -0.42
CLN6-216ENST00000636876 I3L521 148 aa12.39□□□□□ -0.43
CLN6-216ENST00000636876 WRBO00258 174 aa12.39□□□□□ -0.43
CLN6-216ENST00000636876 MBPP02686 304 aaPredicted RBP12.39□□□□□ -0.43
CLN6-216ENST00000636876 LGALS1P09382 135 aaKnown RBP12.39□□□□□ -0.43
CLN6-216ENST00000636876 IL15RAQ13261 267 aa12.39□□□□□ -0.43
CLN6-216ENST00000636876 EXOSC2Q13868 293 aaKnown RBP12.39□□□□□ -0.43
CLN6-216ENST00000636876 C15orf32Q32M92 178 aa12.39□□□□□ -0.43
CLN6-216ENST00000636876 C2orf83Q53S99 150 aa12.39□□□□□ -0.43
CLN6-216ENST00000636876 PVRIGQ6DKI7 326 aa12.39□□□□□ -0.43
CLN6-216ENST00000636876 C8orf86Q6ZUL3 223 aa12.39□□□□□ -0.43
CLN6-216ENST00000636876 SLC24A4Q8NFF2 622 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms