RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	LFNG	Q8NES3	379 aa		12.7	□□□□□ -0.38
CACNA1A-231	ENST00000636816	PIMREG	Q9BSJ6	248 aa		12.7	□□□□□ -0.38
CACNA1A-231	ENST00000636816	NPVF	Q9HCQ7	196 aa		12.7	□□□□□ -0.38
CACNA1A-231	ENST00000636816	RBFOX3	A6NFN3	312 aa		12.7	□□□□□ -0.38
CACNA1A-231	ENST00000636816	VWC2L	B2RUY7	222 aa		12.7	□□□□□ -0.38
CACNA1A-231	ENST00000636816	SSBP2	P81877	361 aa	Predicted RBP	12.7	□□□□□ -0.38
CACNA1A-231	ENST00000636816	PEA15	Q15121	130 aa		12.7	□□□□□ -0.38
CACNA1A-231	ENST00000636816	PPP1R27	Q86WC6	154 aa		12.7	□□□□□ -0.38
CACNA1A-231	ENST00000636816	MMD2	Q8IY49	270 aa		12.7	□□□□□ -0.38
CACNA1A-231	ENST00000636816	OR10G4	Q8NGN3	311 aa		12.7	□□□□□ -0.38
CACNA1A-231	ENST00000636816	OR10G9	Q8NGN4	311 aa		12.7	□□□□□ -0.38
CACNA1A-231	ENST00000636816	OR10G7	Q8NGN6	311 aa		12.7	□□□□□ -0.38
CACNA1A-231	ENST00000636816	LSM4	Q9Y4Z0	139 aa	Known RBP	12.7	□□□□□ -0.38
CACNA1A-231	ENST00000636816	TRAV1-1	A0A0B4J248	108 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816		A0A1W2PN81	502 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	C17orf112	F2Z3M2	114 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	INS-IGF2	F8WCM5	200 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	FOXH1	O75593	365 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	CHRNA7	P36544	502 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	HABP2	Q14520	560 aa	Predicted RBP	12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	MIC13	Q5XKP0	118 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	ZNF787	Q6DD87	383 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	C19orf35	Q6ZS72	473 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	SSMEM1	Q8WWF3	244 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	GGTLC1	Q9BX51	225 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	SEC11C	Q9BY50	192 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	SLC25A22	Q9H936	323 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	KIAA1456	Q9P272	454 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	IGLC7	A0M8Q6	106 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	BTBD17	A6NE02	478 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	YIF1A	O95070	293 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	FAM122C	Q6P4D5	195 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	CLEC2A	Q6UVW9	174 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	AJUBA	Q96IF1	538 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	P2RX4	Q99571	388 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	SLC39A9	Q9NUM3	307 aa		12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	CARHSP1	Q9Y2V2	147 aa	Known RBP	12.69	□□□□□ -0.38
CACNA1A-231	ENST00000636816	MAP1LC3B2	A6NCE7	125 aa		12.68	□□□□□ -0.38
CACNA1A-231	ENST00000636816	HBE1	P02100	147 aa		12.68	□□□□□ -0.38
CACNA1A-231	ENST00000636816	SNRNP70	P08621	437 aa	Known RBP	12.68	□□□□□ -0.38
CACNA1A-231	ENST00000636816	FBP1	P09467	338 aa		12.68	□□□□□ -0.38
CACNA1A-231	ENST00000636816	AREG	P15514	252 aa		12.68	□□□□□ -0.38
CACNA1A-231	ENST00000636816	RPL27A	P46776	148 aa	Known RBP	12.68	□□□□□ -0.38
CACNA1A-231	ENST00000636816	COMP	P49747	757 aa	Predicted RBP	12.68	□□□□□ -0.38
CACNA1A-231	ENST00000636816	LGALS4	P56470	323 aa		12.68	□□□□□ -0.38
CACNA1A-231	ENST00000636816	BTN1A1	Q13410	526 aa		12.68	□□□□□ -0.38
CACNA1A-231	ENST00000636816	GAMT	Q14353	236 aa		12.68	□□□□□ -0.38
CACNA1A-231	ENST00000636816	EAF1	Q96JC9	268 aa	Predicted RBP	12.68	□□□□□ -0.38
CACNA1A-231	ENST00000636816	PBDC1	Q9BVG4	233 aa		12.68	□□□□□ -0.38
CACNA1A-231	ENST00000636816	MAP1LC3B	Q9GZQ8	125 aa		12.68	□□□□□ -0.38
CACNA1A-231	ENST00000636816	GNG13	Q9P2W3	67 aa		12.68	□□□□□ -0.38
CACNA1A-231	ENST00000636816	FBN2	P35556	2912 aa		12.68	□□□□□ -0.38
CACNA1A-231	ENST00000636816	IGKV1OR2-108	A0A075B7D4	117 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	MPDU1	O75352	247 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	ACTL6B	O94805	426 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	IGHV3-48	P01763	117 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	HES1	Q14469	280 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	ICAM4	Q14773	271 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	MMD	Q15546	238 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	TEPP	Q6URK8	271 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	OR2T6	Q8NHC8	308 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	RNF5	Q99942	180 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	TMPRSS5	Q9H3S3	457 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	PXMP4	Q9Y6I8	212 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	MAP1A	P78559	2803 aa	Predicted RBP	12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	MOS	P00540	346 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	OPRK1	P41145	380 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	UBE2E1	P51965	193 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	CD69	Q07108	199 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	PLGLA	Q15195	96 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	RXFP4	Q8TDU9	374 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	RAB24	Q969Q5	203 aa		12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	FNDC4	Q9H6D8	234 aa	Predicted RBP	12.67	□□□□□ -0.38
CACNA1A-231	ENST00000636816	NDUFS8	O00217	210 aa		12.66	□□□□□ -0.38
CACNA1A-231	ENST00000636816	MB	P02144	154 aa		12.66	□□□□□ -0.38
CACNA1A-231	ENST00000636816	MFAP2	P55001	183 aa		12.66	□□□□□ -0.38
CACNA1A-231	ENST00000636816	ATP5I	P56385	69 aa	Predicted RBP	12.66	□□□□□ -0.38
CACNA1A-231	ENST00000636816	KRTAP10-9	P60411	292 aa		12.66	□□□□□ -0.38
CACNA1A-231	ENST00000636816	ACOT6	Q3I5F7	207 aa	Predicted RBP	12.66	□□□□□ -0.38
CACNA1A-231	ENST00000636816	MINOS1	Q5TGZ0	78 aa		12.66	□□□□□ -0.38
CACNA1A-231	ENST00000636816	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	12.66	□□□□□ -0.38
CACNA1A-231	ENST00000636816	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	12.66	□□□□□ -0.38
CACNA1A-231	ENST00000636816	MINOS1-NBL1	R4GNA1	71 aa		12.66	□□□□□ -0.38
CACNA1A-231	ENST00000636816	CELSR2	Q9HCU4	2923 aa		12.66	□□□□□ -0.38
CACNA1A-231	ENST00000636816	CTXND1	A0A1B0GTU2	59 aa		12.65	□□□□□ -0.38
CACNA1A-231	ENST00000636816	LOC105371267	A0A1B0GV96	52 aa		12.65	□□□□□ -0.38
CACNA1A-231	ENST00000636816	ZFP92	A6NM28	416 aa		12.65	□□□□□ -0.38
CACNA1A-231	ENST00000636816	TEX22	C9J3V5	150 aa		12.65	□□□□□ -0.38
CACNA1A-231	ENST00000636816	NBR2	O15453	112 aa		12.65	□□□□□ -0.38
CACNA1A-231	ENST00000636816	MAS1L	P35410	378 aa		12.65	□□□□□ -0.38
CACNA1A-231	ENST00000636816	RUSC1-AS1	Q66K80	236 aa		12.65	□□□□□ -0.38
CACNA1A-231	ENST00000636816	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.65	□□□□□ -0.38
CACNA1A-231	ENST00000636816	CSMD1	Q96PZ7	3565 aa		12.65	□□□□□ -0.38
CACNA1A-231	ENST00000636816	CSMD2	Q7Z408	3487 aa		12.65	□□□□□ -0.38
CACNA1A-231	ENST00000636816	CENPE	Q02224	2701 aa		12.65	□□□□□ -0.38
CACNA1A-231	ENST00000636816	CHD6	Q8TD26	2715 aa		12.65	□□□□□ -0.38
CACNA1A-231	ENST00000636816	FNDC10	F2Z333	226 aa		12.65	□□□□□ -0.38
CACNA1A-231	ENST00000636816	GATA2	P23769	480 aa	Predicted RBP	12.65	□□□□□ -0.38
CACNA1A-231	ENST00000636816	SAA4	P35542	130 aa		12.65	□□□□□ -0.38
CACNA1A-231	ENST00000636816	NPBWR1	P48145	328 aa		12.65	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms