RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 ANKRD55Q3KP44 614 aa11.28□□□□□ -0.6
CACNA1A-230ENST00000636768 Q56UQ5 140 aa11.28□□□□□ -0.6
CACNA1A-230ENST00000636768 ZFAND6Q6FIF0 208 aa11.28□□□□□ -0.6
CACNA1A-230ENST00000636768 SPSB3Q6PJ21 355 aa11.28□□□□□ -0.6
CACNA1A-230ENST00000636768 RBPMS2Q6ZRY4 209 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-230ENST00000636768 GPR141Q7Z602 305 aa11.28□□□□□ -0.6
CACNA1A-230ENST00000636768 OR52I2Q8NH67 350 aa11.28□□□□□ -0.6
CACNA1A-230ENST00000636768 C15orf40Q8WUR7 153 aa11.28□□□□□ -0.6
CACNA1A-230ENST00000636768 TMEM190Q8WZ59 177 aa11.28□□□□□ -0.6
CACNA1A-230ENST00000636768 MRPS26Q9BYN8 205 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-230ENST00000636768 ZNF436Q9C0F3 470 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-230ENST00000636768 EDA2RQ9HAV5 297 aa11.28□□□□□ -0.6
CACNA1A-230ENST00000636768 RETNQ9HD89 108 aa11.28□□□□□ -0.6
CACNA1A-230ENST00000636768 MRPL27Q9P0M9 148 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-230ENST00000636768 HUWE1Q7Z6Z7 4374 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-230ENST00000636768 RBMY1BA6NDE4 496 aaKnown RBP11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 RBMY1EA6NEQ0 496 aaKnown RBP11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 RGS5O15539 181 aa11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 IGKV1-39P01597 117 aa11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 IGKV1D-39P04432 117 aa11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 RBMY1DP0C7P1 496 aaKnown RBP11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 PI3P19957 117 aa11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 TBPP20226 339 aa11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 PPP5CP53041 499 aa11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 LINC00322Q6ZN03 302 aaPredicted RBP11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 ARRDC1Q8N5I2 433 aa11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 OR1P1Q8NH06 330 aa11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 SCARB1Q8WTV0 552 aa11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 ZNF486Q96H40 463 aaPredicted RBP11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 C20orf24Q9BUV8 137 aa11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 HIPK2Q9H2X6 1198 aa11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 DAZ1Q9NQZ3 744 aaKnown RBP11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 MTFP1Q9UDX5 166 aa11.27□□□□□ -0.61
CACNA1A-230ENST00000636768 TRAV25A0A0B4J276 109 aa11.26□□□□□ -0.61
CACNA1A-230ENST00000636768 K7EIM0 57 aa11.26□□□□□ -0.61
CACNA1A-230ENST00000636768 C8orf88P0DMB2 117 aa11.26□□□□□ -0.61
CACNA1A-230ENST00000636768 PIGPP57054 158 aa11.26□□□□□ -0.61
CACNA1A-230ENST00000636768 RND3P61587 244 aa11.26□□□□□ -0.61
CACNA1A-230ENST00000636768 MISP3Q96FF7 219 aa11.26□□□□□ -0.61
CACNA1A-230ENST00000636768 ABHD1Q96SE0 405 aa11.26□□□□□ -0.61
CACNA1A-230ENST00000636768 ATP6V0BQ99437 205 aa11.26□□□□□ -0.61
CACNA1A-230ENST00000636768 FAM110AQ9BQ89 295 aa11.26□□□□□ -0.61
CACNA1A-230ENST00000636768 CHRDL1Q9BU40 450 aa11.26□□□□□ -0.61
CACNA1A-230ENST00000636768 NDUFA4O00483 81 aa11.25□□□□□ -0.61
CACNA1A-230ENST00000636768 AKR1C2P52895 323 aa11.25□□□□□ -0.61
CACNA1A-230ENST00000636768 TAS2R19P59542 299 aa11.25□□□□□ -0.61
CACNA1A-230ENST00000636768 PRCDQ00LT1 54 aa11.25□□□□□ -0.61
CACNA1A-230ENST00000636768 SCGB2B2Q4G0G5 96 aa11.25□□□□□ -0.61
CACNA1A-230ENST00000636768 LHFPL1Q86WI0 220 aa11.25□□□□□ -0.61
CACNA1A-230ENST00000636768 OR2C3Q8N628 320 aa11.25□□□□□ -0.61
CACNA1A-230ENST00000636768 GAR1Q9NY12 217 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-230ENST00000636768 COPZ2Q9P299 210 aa11.25□□□□□ -0.61
CACNA1A-230ENST00000636768 IGHV3OR16-8A0A075B7F1 116 aa11.24□□□□□ -0.61
CACNA1A-230ENST00000636768 F8W735 103 aaPredicted RBP11.24□□□□□ -0.61
CACNA1A-230ENST00000636768 ATG12O94817 140 aa11.24□□□□□ -0.61
CACNA1A-230ENST00000636768 RAB3DO95716 219 aa11.24□□□□□ -0.61
CACNA1A-230ENST00000636768 ADMP35318 185 aa11.24□□□□□ -0.61
CACNA1A-230ENST00000636768 HSPE1P61604 102 aaKnown RBP11.24□□□□□ -0.61
CACNA1A-230ENST00000636768 SPCS2Q15005 226 aa11.24□□□□□ -0.61
CACNA1A-230ENST00000636768 IZUMO4Q1ZYL8 232 aa11.24□□□□□ -0.61
CACNA1A-230ENST00000636768 TRIM16LQ309B1 348 aa11.24□□□□□ -0.61
CACNA1A-230ENST00000636768 CCDC71LQ8N9Z2 235 aa11.24□□□□□ -0.61
CACNA1A-230ENST00000636768 TMEM229BQ8NBD8 167 aa11.24□□□□□ -0.61
CACNA1A-230ENST00000636768 OR4D10Q8NGI6 311 aa11.24□□□□□ -0.61
CACNA1A-230ENST00000636768 ZFAND1Q8TCF1 268 aa11.24□□□□□ -0.61
CACNA1A-230ENST00000636768 TP53RKQ96S44 253 aa11.24□□□□□ -0.61
CACNA1A-230ENST00000636768 SPAG8Q99932 426 aaPredicted RBP11.24□□□□□ -0.61
CACNA1A-230ENST00000636768 C5orf66Q9H5L9 145 aa11.24□□□□□ -0.61
CACNA1A-230ENST00000636768 RYR3Q15413 4870 aa11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 C3orf85A0A1B0GTC6 90 aa11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 GABARAPH6UMI1 98 aa11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 NUPL2O15504 423 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 ZNF207O43670 478 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 CD74P04233 296 aa11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 ALDH3B2P48448 385 aa11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 MFAP4P55083 255 aa11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 ERHP84090 104 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 RELQ04864 619 aaPredicted RBP11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 SPINK9Q5DT21 86 aa11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 LAMTOR1Q6IAA8 161 aa11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 STEAP1BQ6NZ63 245 aa11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 CLVS1Q8IUQ0 354 aaPredicted RBP11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 SLC35G3Q8N808 338 aa11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 ZNF114Q8NC26 417 aa11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 TERB2Q8NHR7 220 aa11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 RNASE11Q8TAA1 199 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 PINX1Q96BK5 328 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 PDCD10Q9BUL8 212 aa11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 GGTLC1Q9BX51 225 aa11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 MIXL1Q9H2W2 232 aa11.23□□□□□ -0.61
CACNA1A-230ENST00000636768 I3L2K1 104 aa11.22□□□□□ -0.61
CACNA1A-230ENST00000636768 CTDSP2O14595 271 aa11.22□□□□□ -0.61
CACNA1A-230ENST00000636768 YIF1AO95070 293 aa11.22□□□□□ -0.61
CACNA1A-230ENST00000636768 MT-CO2P00403 227 aa11.22□□□□□ -0.61
CACNA1A-230ENST00000636768 IGKV1-5P01602 117 aa11.22□□□□□ -0.61
CACNA1A-230ENST00000636768 MRPS10P82664 201 aaKnown RBP11.22□□□□□ -0.61
CACNA1A-230ENST00000636768 OR13C8Q8NGS7 320 aa11.22□□□□□ -0.61
CACNA1A-230ENST00000636768 NDUFA13Q9P0J0 144 aa11.22□□□□□ -0.61
CACNA1A-230ENST00000636768 LOC102724200A0A096LPH7 203 aaPredicted RBP11.21□□□□□ -0.61
CACNA1A-230ENST00000636768 C15orf62A8K5M9 175 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms