RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 HSPE1P61604 102 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 RHOBP62745 196 aa11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 MORN5Q5VZ52 161 aa11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 CMTM2Q8TAZ6 248 aa11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 ZCCHC14Q8WYQ9 949 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 MRPL18Q9H0U6 180 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 PLEKHA3Q9HB20 300 aa11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 TRGV10A0A0A0MS01 117 aa11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 CHRNB4P30926 498 aa11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 LGALS4P56470 323 aa11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 TNFAIP6P98066 277 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 DIAPH2-AS1Q14236 149 aa11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 CENPWQ5EE01 88 aa11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 MBNL2Q5VZF2 373 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 TMEM144Q7Z5S9 345 aa11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 VN1R17PQ8TDU5 208 aa11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 NABP2Q9BQ15 211 aa11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 SPOCK3Q9BQ16 436 aa11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 HSPB9Q9BQS6 159 aa11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 SAMD10Q9BYL1 202 aa11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 POLR3KQ9Y2Y1 108 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 REG1AP05451 166 aa11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 SSBP2P81877 361 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 RNASEH2CQ8TDP1 164 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-228ENST00000636610 KBTBD11-OT1A0A1B0GTJ5 212 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 E7EUB6 86 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 CRISP2P16562 243 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 MMD2Q8IY49 270 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 ST6GALNAC3Q8NDV1 305 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 DIRC2Q96SL1 478 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 TP53TG3Q9ULZ0 132 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 RPH3ALQ9UNE2 315 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 LSM4Q9Y4Z0 139 aaKnown RBP11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 SPTBN1Q01082 2364 aaKnown RBP11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 WNK2Q9Y3S1 2297 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 IGHV3-72A0A0B4J1Y9 119 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 TRAV34A0A0B4J273 112 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 GCGP01275 180 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 RAB31Q13636 194 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 IQCJQ1A5X6 159 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 COA6Q5JTJ3 125 aaKnown RBP11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 PRR27Q6MZM9 219 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 C19orf35Q6ZS72 473 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 TCTEX1D1Q8N7M0 179 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 H1FXQ92522 213 aaKnown RBP11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 SLC35D1Q9NTN3 355 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 NAGKQ9UJ70 344 aa11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 SPTAN1Q13813 2472 aaKnown RBP11.48□□□□□ -0.57
CACNA1A-228ENST00000636610 HELTA6NFD8 242 aa11.47□□□□□ -0.57
CACNA1A-228ENST00000636610 H3BTX0 84 aa11.47□□□□□ -0.57
CACNA1A-228ENST00000636610 TYMSP04818 313 aa11.47□□□□□ -0.57
CACNA1A-228ENST00000636610 GNG4P50150 75 aa11.47□□□□□ -0.57
CACNA1A-228ENST00000636610 LCN2P80188 198 aa11.47□□□□□ -0.57
CACNA1A-228ENST00000636610 DDB2Q92466 427 aa11.47□□□□□ -0.57
CACNA1A-228ENST00000636610 EAF1Q96JC9 268 aaPredicted RBP11.47□□□□□ -0.57
CACNA1A-228ENST00000636610 NDUFAF3Q9BU61 184 aa11.47□□□□□ -0.57
CACNA1A-228ENST00000636610 NAT8BQ9UHF3 227 aa11.47□□□□□ -0.57
CACNA1A-228ENST00000636610 ATRXP46100 2492 aa11.47□□□□□ -0.57
CACNA1A-228ENST00000636610 Q6ZWC4 215 aa11.47□□□□□ -0.57
CACNA1A-228ENST00000636610 DCHS2Q6V1P9 2916 aa11.47□□□□□ -0.57
CACNA1A-228ENST00000636610 MALRD1Q5VYJ5 2156 aa11.47□□□□□ -0.57
CACNA1A-228ENST00000636610 MPDU1O75352 247 aa11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 PMCHP20382 165 aa11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 PDLIM4P50479 330 aa11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 KRTDAPP60985 99 aa11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 RAB1CQ92928 201 aa11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 SNHG12Q9BXW3 62 aa11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 RNF114Q9Y508 228 aa11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 DYSFO75923 2080 aa11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 F2RL2O00254 374 aa11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 LINC00869P0C866 280 aa11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 SAA1P0DJI8 122 aaPredicted RBP11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 CT45A6P0DMU7 189 aa11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 CT45A5P0DMU8 189 aa11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 CT45A7P0DMV0 189 aa11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 PYYP10082 97 aa11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 FOXL1Q12952 345 aa11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 RNF7Q9UBF6 113 aa11.46□□□□□ -0.57
CACNA1A-228ENST00000636610 A6NNC1 897 aa11.46□□□□□ -0.58
CACNA1A-228ENST00000636610 ZNF891A8MT65 544 aaPredicted RBP11.46□□□□□ -0.58
CACNA1A-228ENST00000636610 IGHV1-46P01743 117 aa11.46□□□□□ -0.58
CACNA1A-228ENST00000636610 LINC00310P59036 64 aa11.46□□□□□ -0.58
CACNA1A-228ENST00000636610 TRAT1Q6PIZ9 186 aa11.46□□□□□ -0.58
CACNA1A-228ENST00000636610 WFDC8Q8IUA0 241 aa11.46□□□□□ -0.58
CACNA1A-228ENST00000636610 TMEM14BQ9NUH8 114 aa11.46□□□□□ -0.58
CACNA1A-228ENST00000636610 CASP6P55212 293 aa11.45□□□□□ -0.58
CACNA1A-228ENST00000636610 TAS2R60P59551 318 aa11.45□□□□□ -0.58
CACNA1A-228ENST00000636610 FAM19A2Q8N3H0 131 aa11.45□□□□□ -0.58
CACNA1A-228ENST00000636610 CCL17Q92583 94 aa11.45□□□□□ -0.58
CACNA1A-228ENST00000636610 MRPL20Q9BYC9 149 aaKnown RBP11.45□□□□□ -0.58
CACNA1A-228ENST00000636610 PARD6AQ9NPB6 346 aa11.45□□□□□ -0.58
CACNA1A-228ENST00000636610 FAM215AQ9Y5M1 114 aa11.45□□□□□ -0.58
CACNA1A-228ENST00000636610 BSNQ9UPA5 3926 aa11.45□□□□□ -0.58
CACNA1A-228ENST00000636610 GGTLC3B5MD39 225 aa11.45□□□□□ -0.58
CACNA1A-228ENST00000636610 TCAPO15273 167 aa11.45□□□□□ -0.58
CACNA1A-228ENST00000636610 C1orf162Q8NEQ5 155 aaPredicted RBP11.45□□□□□ -0.58
CACNA1A-228ENST00000636610 FAM168AQ92567 244 aa11.45□□□□□ -0.58
CACNA1A-228ENST00000636610 ZNF503Q96F45 646 aa11.45□□□□□ -0.58
CACNA1A-228ENST00000636610 ASCL3Q9NQ33 180 aa11.45□□□□□ -0.58
CACNA1A-228ENST00000636610 IL36BQ9NZH7 164 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms