RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 CCDC71LQ8N9Z2 235 aa13.82□□□□□ -0.2
CLN6-210ENST00000635747 BSCL2Q96G97 398 aaPredicted RBP13.82□□□□□ -0.2
CLN6-210ENST00000635747 ZC4H2Q9NQZ6 224 aa13.82□□□□□ -0.2
CLN6-210ENST00000635747 HUWE1Q7Z6Z7 4374 aaKnown RBP13.82□□□□□ -0.2
CLN6-210ENST00000635747 TGOLN2O43493 480 aa13.81□□□□□ -0.2
CLN6-210ENST00000635747 B3GALNT1O75752 331 aa13.81□□□□□ -0.2
CLN6-210ENST00000635747 IGKV1-39P01597 117 aa13.81□□□□□ -0.2
CLN6-210ENST00000635747 IGKV1D-39P04432 117 aa13.81□□□□□ -0.2
CLN6-210ENST00000635747 MEF2DQ14814 521 aa13.81□□□□□ -0.2
CLN6-210ENST00000635747 OR1P1Q8NH06 330 aa13.81□□□□□ -0.2
CLN6-210ENST00000635747 MRGPRFQ96AM1 343 aa13.81□□□□□ -0.2
CLN6-210ENST00000635747 TM2D3Q9BRN9 247 aa13.81□□□□□ -0.2
CLN6-210ENST00000635747 GAR1Q9NY12 217 aaKnown RBP13.81□□□□□ -0.2
CLN6-210ENST00000635747 COPZ2Q9P299 210 aa13.81□□□□□ -0.2
CLN6-210ENST00000635747 UFC1Q9Y3C8 167 aa13.81□□□□□ -0.2
CLN6-210ENST00000635747 STAB2Q8WWQ8 2551 aa13.81□□□□□ -0.2
CLN6-210ENST00000635747 TMEM213A2RRL7 107 aa13.8□□□□□ -0.2
CLN6-210ENST00000635747 ZNF785A8K8V0 405 aa13.8□□□□□ -0.2
CLN6-210ENST00000635747 CTDSPLO15194 276 aa13.8□□□□□ -0.2
CLN6-210ENST00000635747 CD81P60033 236 aa13.8□□□□□ -0.2
CLN6-210ENST00000635747 HSPE1P61604 102 aaKnown RBP13.8□□□□□ -0.2
CLN6-210ENST00000635747 SCGB2B2Q4G0G5 96 aa13.8□□□□□ -0.2
CLN6-210ENST00000635747 ZNF57Q68EA5 555 aaPredicted RBP13.8□□□□□ -0.2
CLN6-210ENST00000635747 UXS1Q8NBZ7 420 aa13.8□□□□□ -0.2
CLN6-210ENST00000635747 MCFD2Q8NI22 146 aa13.8□□□□□ -0.2
CLN6-210ENST00000635747 SMIM4Q8WVI0 70 aa13.8□□□□□ -0.2
CLN6-210ENST00000635747 DIRAS2Q96HU8 199 aa13.8□□□□□ -0.2
CLN6-210ENST00000635747 NEURL2Q9BR09 285 aa13.8□□□□□ -0.2
CLN6-210ENST00000635747 C21orf62Q9NYP8 219 aa13.8□□□□□ -0.2
CLN6-210ENST00000635747 C3orf85A0A1B0GTC6 90 aa13.79□□□□□ -0.2
CLN6-210ENST00000635747 C3orf84H3BNL1 204 aa13.79□□□□□ -0.2
CLN6-210ENST00000635747 PI3P19957 117 aa13.79□□□□□ -0.2
CLN6-210ENST00000635747 PPP5CP53041 499 aa13.79□□□□□ -0.2
CLN6-210ENST00000635747 ERHP84090 104 aaKnown RBP13.79□□□□□ -0.2
CLN6-210ENST00000635747 PRCDQ00LT1 54 aa13.79□□□□□ -0.2
CLN6-210ENST00000635747 GUCA2BQ16661 112 aa13.79□□□□□ -0.2
CLN6-210ENST00000635747 OR4D10Q8NGI6 311 aa13.79□□□□□ -0.2
CLN6-210ENST00000635747 SCARB1Q8WTV0 552 aa13.79□□□□□ -0.2
CLN6-210ENST00000635747 ZNF436Q9C0F3 470 aaPredicted RBP13.79□□□□□ -0.2
CLN6-210ENST00000635747 MRPL27Q9P0M9 148 aaKnown RBP13.79□□□□□ -0.2
CLN6-210ENST00000635747 OR2T8A6NH00 312 aa13.78□□□□□ -0.2
CLN6-210ENST00000635747 DBX1A6NMT0 343 aa13.78□□□□□ -0.2
CLN6-210ENST00000635747 DISC1C4P0D8 188 aa13.78□□□□□ -0.2
CLN6-210ENST00000635747 C8orf88P0DMB2 117 aa13.78□□□□□ -0.2
CLN6-210ENST00000635747 AKR1C2P52895 323 aa13.78□□□□□ -0.2
CLN6-210ENST00000635747 IL18Q14116 193 aa13.78□□□□□ -0.2
CLN6-210ENST00000635747 ANKRD55Q3KP44 614 aa13.78□□□□□ -0.2
CLN6-210ENST00000635747 SLC16A13Q7RTY0 426 aa13.78□□□□□ -0.2
CLN6-210ENST00000635747 OR2C3Q8N628 320 aa13.78□□□□□ -0.2
CLN6-210ENST00000635747 ZNF114Q8NC26 417 aa13.78□□□□□ -0.2
CLN6-210ENST00000635747 TP53RKQ96S44 253 aa13.78□□□□□ -0.2
CLN6-210ENST00000635747 SPATA25Q9BR10 227 aa13.78□□□□□ -0.2
CLN6-210ENST00000635747 TRAV25A0A0B4J276 109 aa13.77□□□□□ -0.21
CLN6-210ENST00000635747 CTSDP07339 412 aaPredicted RBP13.77□□□□□ -0.21
CLN6-210ENST00000635747 AKAIN1P0CW23 69 aa13.77□□□□□ -0.21
CLN6-210ENST00000635747 MFAP2P55001 183 aa13.77□□□□□ -0.21
CLN6-210ENST00000635747 SURF2Q15527 256 aaPredicted RBP13.77□□□□□ -0.21
CLN6-210ENST00000635747 TM4SF20Q53R12 229 aa13.77□□□□□ -0.21
CLN6-210ENST00000635747 UNQ9165/PRO28630Q6UXU0 137 aa13.77□□□□□ -0.21
CLN6-210ENST00000635747 OR13C8Q8NGS7 320 aa13.77□□□□□ -0.21
CLN6-210ENST00000635747 CACNG8Q8WXS5 425 aa13.77□□□□□ -0.21
CLN6-210ENST00000635747 TXN2Q99757 166 aa13.77□□□□□ -0.21
CLN6-210ENST00000635747 C6orf62Q9GZU0 229 aaPredicted RBP13.77□□□□□ -0.21
CLN6-210ENST00000635747 PLEKHA3Q9HB20 300 aa13.77□□□□□ -0.21
CLN6-210ENST00000635747 MLXQ9UH92 298 aa13.77□□□□□ -0.21
CLN6-210ENST00000635747 C14orf166Q9Y224 244 aaKnown RBP13.77□□□□□ -0.21
CLN6-210ENST00000635747 K7EIM0 57 aa13.76□□□□□ -0.21
CLN6-210ENST00000635747 NDUFA4O00483 81 aa13.76□□□□□ -0.21
CLN6-210ENST00000635747 EDN2P20800 178 aa13.76□□□□□ -0.21
CLN6-210ENST00000635747 HAGHQ16775 308 aa13.76□□□□□ -0.21
CLN6-210ENST00000635747 TRIM16LQ309B1 348 aa13.76□□□□□ -0.21
CLN6-210ENST00000635747 Q56UQ5 140 aa13.76□□□□□ -0.21
CLN6-210ENST00000635747 LINC00299Q6ZSB3 139 aa13.76□□□□□ -0.21
CLN6-210ENST00000635747 MARCH1Q8TCQ1 289 aa13.76□□□□□ -0.21
CLN6-210ENST00000635747 TMEM190Q8WZ59 177 aa13.76□□□□□ -0.21
CLN6-210ENST00000635747 RRNAD1Q96FB5 475 aaKnown RBP13.76□□□□□ -0.21
CLN6-210ENST00000635747 WDR89Q96FK6 387 aaPredicted RBP13.76□□□□□ -0.21
CLN6-210ENST00000635747 PDCD10Q9BUL8 212 aa13.76□□□□□ -0.21
CLN6-210ENST00000635747 KMT2CQ8NEZ4 4911 aaKnown RBP13.75□□□□□ -0.21
CLN6-210ENST00000635747 IGHV3-35A0A0C4DH35 117 aa13.75□□□□□ -0.21
CLN6-210ENST00000635747 OR11H12B2RN74 326 aa13.75□□□□□ -0.21
CLN6-210ENST00000635747 IGKV1-5P01602 117 aa13.75□□□□□ -0.21
CLN6-210ENST00000635747 CD7P09564 240 aa13.75□□□□□ -0.21
CLN6-210ENST00000635747 UCP1P25874 307 aa13.75□□□□□ -0.21
CLN6-210ENST00000635747 FCGR2BP31994 310 aaPredicted RBP13.75□□□□□ -0.21
CLN6-210ENST00000635747 S100A5P33763 92 aa13.75□□□□□ -0.21
CLN6-210ENST00000635747 MFAP4P55083 255 aa13.75□□□□□ -0.21
CLN6-210ENST00000635747 RELQ04864 619 aaPredicted RBP13.75□□□□□ -0.21
CLN6-210ENST00000635747 CNPY1Q3B7I2 92 aa13.75□□□□□ -0.21
CLN6-210ENST00000635747 RBPMS2Q6ZRY4 209 aaKnown RBP13.75□□□□□ -0.21
CLN6-210ENST00000635747 TMEM61Q8N0U2 210 aa13.75□□□□□ -0.21
CLN6-210ENST00000635747 UBAC2Q8NBM4 344 aa13.75□□□□□ -0.21
CLN6-210ENST00000635747 MUC7Q8TAX7 377 aa13.75□□□□□ -0.21
CLN6-210ENST00000635747 MISP3Q96FF7 219 aa13.75□□□□□ -0.21
CLN6-210ENST00000635747 PRRT1Q99946 306 aa13.75□□□□□ -0.21
CLN6-210ENST00000635747 DAZ1Q9NQZ3 744 aaKnown RBP13.75□□□□□ -0.21
CLN6-210ENST00000635747 IGHV3-21A0A0B4J1V1 117 aa13.74□□□□□ -0.21
CLN6-210ENST00000635747 INS-IGF2F8WCM5 200 aa13.74□□□□□ -0.21
CLN6-210ENST00000635747 K7EMT4 169 aa13.74□□□□□ -0.21
CLN6-210ENST00000635747 NUPL2O15504 423 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms