RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 IGKV1-27A0A075B6S5 117 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 TRAV36DV7A0A075B6V5 113 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 IGHV3-21A0A0B4J1V1 117 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 PNMA8CA0A1B0GUJ8 204 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 TCRBV4S1A1TA0A5B7 111 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 GGT3PA6NGU5 568 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 NCBP2LA6PVI3 153 aaKnown RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 VGLL3A8MV65 326 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 A8MWL6 223 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 ODF3BA8MYP8 253 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF879B4DU55 563 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 C5orf58C9J3I9 102 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 PPP5D1E7EU14 171 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 F5H5K5 113 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 G3V318 75 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 M0R135 149 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 NME4O00746 187 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 PLPP3O14495 311 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 NDUFAB1O14561 156 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 COPEO14579 308 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CDIPTO14735 213 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 PHYHO14832 338 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 PFDN6O15212 129 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 SGCEO43556 437 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CHP2O43745 196 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 ERLIN1O75477 346 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF682O95780 498 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 HPRT1P00492 218 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 NRASP01111 189 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 HRASP01112 189 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 KRASP01116 189 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 IGF2P01344 180 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 IGKV1D-33P01593 117 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 IGKV1-33P01594 117 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 HLA-AP01891 365 aaKnown RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 HBE1P02100 147 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 PRH1P02810 166 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 SERPINE1P05121 402 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 IL6P05231 212 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CRYBA1P05813 215 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CDK1P06493 297 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CRHP06850 196 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 GUSBP08236 651 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 KRT16P08779 473 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 FBP1P09467 338 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CD7P09564 240 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 P0C880 135 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CT45A6P0DMU7 189 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CT45A5P0DMU8 189 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CT45A7P0DMV0 189 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 NEFHP12036 1026 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CBR1P16152 277 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CTRB1P17538 263 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 TAC1P20366 129 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 NTF3P20783 257 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 PRPS1L1P21108 318 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 MSR1P21757 451 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CXCR1P25024 350 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 NFYBP25208 207 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 STOMP27105 288 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 HTR1DP28221 377 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 BLVRBP30043 206 aaPredicted RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 SERPINB1P30740 379 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 S100A3P33764 101 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 PHBP35232 272 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 POLR2IP36954 125 aaKnown RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 PEX19P40855 299 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 TGM4P49221 684 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 MRPL19P49406 292 aaKnown RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 RGS6P49758 472 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 HCCSP53701 268 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 PSMD4P55036 377 aaKnown RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CMC4P56277 68 aaPredicted RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 EDDM3BP56851 147 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF121P58317 390 aaPredicted RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 TAS2R41P59536 307 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 UBE2MP61081 183 aaKnown RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 SLC35A2P78381 396 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 SLC35A1P78382 337 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 H3F3AP84243 136 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 IL5RAQ01344 420 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 RELAQ04206 551 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 PRDX4Q13162 271 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 HES1Q14469 280 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CASP8Q14790 479 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 MAPRE2Q15555 327 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 OR1Q1Q15612 314 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF141Q15928 474 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 BCL2A1Q16548 175 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 SP6Q3SY56 376 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 TTMPQ5BVD1 217 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CT45A1Q5HYN5 189 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CDKL4Q5MAI5 379 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CPTPQ5TA50 214 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 FAM222AQ5U5X8 452 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 PLCXD3Q63HM9 321 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM53Q6P2H8 277 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 C16orf87Q6PH81 154 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 HAGHLQ6PII5 290 aaPredicted RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 TBPL2Q6SJ96 375 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms